cep112 (cep112)


Basic Information

Item Value
gene id cep112
gene name cep112
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17103295 ~ 17307076 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671176.1
TACTATGTATCTGACTTCACGGAGAGTTTAGTTTGAATCGGGTTTATTTGCAGTGATTTATAAACCGGTTTATTCTGCAGAGATAGAAGCGGATTAACAGTGTGAGGAGGTTAAATATGTGATGTATTTAGGTAGCGTTAGTTTACTGGGGTagaatattgtgttttattgagtttaaagtgttttaaatgaggGTTTGTGTGACTATAGAGGTGTGAGTGAGTTTATAACAGTAACAGTTATAGTTCTAGTCATATTTATAGGTAATATTTCCGGTATAGGTAAAGTTACCTGCTGCAGGTAAAGTTCTCAGGGCTGTATGATGAACTCTGAGGACTCTGTGGAGGATCTGGACTCTCAGTTTGATCATTATCTGGTGGATATGAAGCCCTTCGTGCTCAAACTGACCCATAAATCAGAGCGTCAGCGTTGCGCGCTGTGGATTAAGAAGCTGTGTGATCCGGTGGCGTCGGGTTCGGGTCTGACGGGCAGGAAGAATCGTAACGCCTACGCCCGGCTCCTTTTGGTGATGCTGAGACGAGGGGTCCTCGAGGGTCCCTTTACACACAGGCCAGAAGCGGGCAGCCTCAAGACTTTACCAACATATATGTCCATCTACTTCGATGAGCCGTTATTGGCCAGACCTCGGGGGCATAGCTCTGCTGTTCTGCCGGACTGGGTCTCCAGTGAATTGGGTCATTCAGAAGATACATGGACCAGTTTACCAAAAGACTCGTCTTCACCCAGgAGAAGGAATCTTTTCAGTGATAAATCTCCATCCAGACCCTTCTCTTCTAGTCCTCTCAAACACACCGAGGACACGCTGGATGGCCGGCACAGAAAACAGCCCGTCTCCAGCTTGGAGGACAGTGACCTAGAAGCTCGGCTCAACAGCTGGAACCTCGGgATTGAAGATCCACGGTATCTGCGGGAGAACCCGATCCCCCTATCTCCGATTCACCCCAAGTCCAGCCTAGTAAAGAGTATCAGCAGTACCGGTGCTGAGGAGAGAGCATCAGCACTCCTACCCAATAAAGAGACTGAAATGAGGAGTAAAGTTCTGGAAGCGAAACATCAGGAGGAAAGACTGAAGCTGCAGCAGAAACATGATACAGATGTTCAGAAGATTTTAGAGCGTAAGAACGGTGAAATAGCAGAGCTGAAGAGCATGTACCGAACCAAACAGAAGGAGGCTGAAGAGGCAGTGAGGACACTGGAGAAAAAAGTTCAAAGCTTGCTGCGCGAGTCCCAGGTCATCCGGCAGAGTAAAGAGAAGCAGATCGTCGAGCTGAAGAAGCTGTCGGATCAAAGTGCCGACTCCCTCAAAAACGACTGGGAGAAGAAGCTTCATGCGACAGTGGCCCAGATGGAGCAGGAGAAGTTtgatcttcagaagaagcaCACCGAGAACATCCAGGAGCTGCTGGAGGACACCAACCAGAGGCTGGCCAAGATGGAGGCGGAGTACAGCGCCCAGGCCCAGACCACCGAGCGGACGGTGCGTGAGCTGGAGGCGAGGGTGAAGCAGCTCTCGGTGGAGGTGGAGAATGGGAACCTGCTCAGGCAGAAGGTCACGCAGGAGAAGGCGGAGCTGGAGATCCACATCGCTGCCATCAGTGCTGAACTACAGGAGGCCAACCGCAGGAGTATATCTATGCTGAAGGAGAAGGAAGTGCAGAATGAGCAGTATGAAGAAACACTGCAGAAACTCCACAATAAACACGAAGCCGATATGAACCACTTCCAGCAGGAGCACGCCCTCTCCGCTGCCAAGgCCTCGGAGGTGATTGAGGATCTGGAGCGTATGGTGGCTCAGCTCAGGCAGCAGCTGCAGGACAGTGAACACCGGCGACAGAAACAGCTCAGGGAGCTGGAGAATAAGATGCACCAAGAGACAAAGGAGCTTCAGCACAGCAGTGAGATAAAGGTGCAGGCTCTGCAGGCCGAGCTGGAGAAGGAGCGAGCCGACGCCAGGAGGAGGAGCAACAAGCTGGAGGACGCACTCAGGGATAGAGATGAGCAGTTAAGTCGTATGAGGGAATCTCAGAGGCAGCAGGTCCAGCAGGCGGAGCAAACTCTGGAGAACTTCAAGAAGCAGGTGGAGCTCAGCTCAGAAAAAGCCTACACCGACATGAAGCAGCAGGTGAGCTCCATCCAGAACTCCACCCTCAAAACCAGAGCTGTACAATACACAAGCCCTGTCTGTACAGGATTAAtatctcagggggttctggggtcattttatCACGGATCTACGGGTCTTCAATCCGGTGTCAAAGCCAGTTTCGGAGATCGGAATGAATTGTCACCAGTGAGAATCGAGTCGTTGCCTGACTGGAATATGTCGTATCTTGTGTTGGAGCGCCAATGGAGAATCGTGGACCTGAAGctgcagcaggagcaggagcgAACGCACCTACTCCAGAAGCACAACGGCGAGAAGGAGGGTCTGGTCCAGGAGCACCAGCGGGAGATCTCCAGCCTAGAGAGGCAGGCGAGGGCCGCCATGCTCCAGCACCAGGCTCAGACCCAGGAGTGGAGGAGGCGCGACGGGCAGacTATCTCTGATCTGGAGGTTCAGGTTCAGGCTCTGAGGGAGGAGGTTCTGGAGGTTCAGGCTCAGAGGAAGCAGCAGCTGAGTGAGCTGACTGTCCTGCGGGAGGAGGAGCGCCAGCGCGCCGCTCAGGACCAGGACGCCGCGGTGTCCCGCGTCCGCGCCGAGATGGAGAGAGTACGCCAGGACCTGGAGAAAACCcacactgcagagagagagagagcccagGAGAAGAGTTCGACTCCCGGCCGGATCCTCAGACGCCGCCTGGTCTCTGTACCCGCCGTCTCCCGTAATGGCGGTGCCGACCCGGCACAGCCGCCCCGCGGGTCATCAGACGAGAGCGCCGGCAGGAGCGCCGGCCTCCTTAAGGCCAATAAAGCCGGCAGATGTGCTCCTAACCTGACTTATGAACCTGGCCTGCCACAGCACCTGCCACAGCACCAGCCACAGCACCTGCCACAGCACCAGCCACAGGGCCTGCCACAatacaggaaacagggccagccACAGCACCAACCACAGGGCCTGCCACAACATCAGCCACAAGATGTGCCAGGACACAGGGCCTGCCACAACATCAGCCACAAGATGTGCCAGGACACAGGGCCTGCCACAGCACAGGCCCTGCCCCAGCACCAGCCACAGGGCCTGCCACAGAGctgggttgccAAGTCTGCGCAGgcagtAGCAGAGCTGCAGACTGCGCTGTGTTCAGTAAAGGAGGAGAGTATTAAGAATAAACAGGCTCTAGAGCGCCAACTACAGGAAGCACAGATGCGGTGGGACGAGGAAAAACGACAACTCAACCGAGATTCAGACAGAGCCAGCAAGGTTCTCCAGGAGCGGGTGGAGGCCCTGCAGAAGCAGCTCCACACTGCTGAGAAGAAGCTGATGACCCGGCAACTGGAGACCCAGGAGCAGATCACACTTATCCGTCAGGAGTACGAGCTGAAGATTAAAGGGCTGATGCCGGCTGAGCTCAGGCAGGAGCTGGAGGACACCATCACCTCTCTCAAGTCTCAGGTCAACTTCCTCCAGAAGAGAGCGTCGGTTCTACAGGAGGACTTGGACGCCTGCCGCAACAGGAGGTGA

Function

symbol description
cep112 Human ortholog(s) of this gene implicated in spermatogenic failure 44. Orthologous to human CEP112 (centrosomal protein 112).

NR:

description
PREDICTED: centrosomal protein of 112 kDa

GO: NA

KEGG:

id description
K16767 CEP112; centrosomal protein CEP112

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671176.1 True 3649 mRNA 0.55 28 17103295 17307076

Neighbor

gene id symbol gene type direction distance location
LOC103042974 LOC108437161 coding downstream 6470 17045514 ~ 17096825 (-)
LOC103039070 NA coding downstream 157630 16895580 ~ 16945665 (-)
LOC111192875 LOC108437882 coding downstream 396220 16696081 ~ 16707075 (-)
LOC103027149 LOC103027149 coding downstream 442788 16654113 ~ 16660507 (-)
LOC103027662 LOC108411501,LOC108275084,LOC107658982 coding downstream 525479 16529205 ~ 16577816 (-)
stk19 stk19,LOC106601743,LOC106601674 coding upstream 414053 17721129 ~ 17731699 (-)
LOC111192974 tvp23b,LOC108437154,LOC105899270 coding upstream 475676 17782752 ~ 17797809 (-)
LOC111192966 NA coding upstream 499998 17807074 ~ 17817082 (-)
ush1g ush1g,ush1ga,LOC107556601,LOC107698769,LOC107568596 coding upstream 533103 17840179 ~ 17855162 (-)
hid1 hid1,LOC107710705,LOC107698779 coding upstream 577544 17884620 ~ 17920811 (-)
LOC111192963 NA non-coding downstream 61224 17039842 ~ 17042071 (-)
G64510 NA non-coding downstream 150425 16952588 ~ 16952870 (-)
G64508 NA non-coding downstream 154507 16948589 ~ 16948788 (-)
G64505 NA non-coding downstream 197274 16905403 ~ 16906021 (-)
G64491 NA non-coding downstream 210830 16877616 ~ 16892465 (-)
G64682 NA non-coding upstream 271721 17578797 ~ 17581592 (-)
G64688 NA non-coding upstream 299818 17606894 ~ 17670417 (-)
G64694 NA non-coding upstream 333084 17640160 ~ 17642229 (-)
G64692 NA non-coding upstream 370026 17677102 ~ 17678665 (-)
G64835 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 non-coding upstream 383153 17690229 ~ 17719911 (-)
G64492 NA other downstream 215392 16882335 ~ 16887903 (-)
G64387 NA other downstream 517648 16585065 ~ 16585647 (-)
LOC103027187 NA other downstream 1235500 15671306 ~ 15867795 (-)
G64060 NA other downstream 2108463 14994164 ~ 14994832 (-)
LOC111192906 NA other downstream 2110565 14990229 ~ 14992730 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other upstream 228220 17535296 ~ 17664561 (-)
LOC103043390 NA other upstream 371738 17678814 ~ 17689312 (-)
G64886 NA other upstream 621431 17928507 ~ 17931170 (-)
LOC111192976 NA other upstream 1317799 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other upstream 1331231 18638307 ~ 18650343 (-)

Expression


Co-expression Network