stk19 (stk19,LOC106601743,LOC106601674)


Basic Information

Item Value
gene id stk19
gene name stk19,LOC106601743,LOC106601674
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17721129 ~ 17731699 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671180.1
ATGAAAAGGCTGCTGTTAACTTCTGACGACAAAGCAATTACCATTAGTTTAAATTTACTTAACTTGTCCATCACTACAgaactccaaacttcatgtagattcagattttttggtatatttatatatatatttaatctgttttctctttttttgtgtaaagCAGATGGACCTCCTGATGTTAAGGCCACACTTCAGTATCTCATGACTCTTTTTCCTCGCAAACTTTTCAACGACAGCCTTCCGCAAATCGTCTTCAAGCACCAGCTCTACAGTTTACACAGCGACAAAACCTTGGTGGACAAGCAAGtgAATGAATTGAGAGATAAGGGGGAACTGCTCATGTTCCAGCTGGGTTTCGGCTCAGATGCCTTTGGCCTGGTGTTTTCTGAGGACTACAGAACCAAAGTTCTGGCCATGGAAGATGGAAGATCCACTCTGGGAACGGTGGAGAAGTTTCTGGATAAAGTTCTGCCTGGATGCTCAGACCTGAGTTTCAGCAAAGACAAAATGCTGAAGCACTTCCTTTTCACTGATTCAGAAATAACGCAGCTTGTGAAGTCGGGGGTGCTGACTGTGAGGGACGCTGGCAGCTGGTGGTTGTCTATTCCAAACTCGGGCCGGTTCACCAAATACTTTATACAGGgacGCAAGGCTGTTCTGGGCATGGTCAAGAAGtcaaaatacaatgaaatattaAAGAACGATTTGCAAGAACGACGCACCACTTCACATGTTAAACTAGATATAAAATACCACATTCATGATATTATTGGAGCAGAACTGGTGGAATGCATACAGACCACATCAGGAACCTTGTTACGATTTGTGGACACTTGATAATGAATTTATCAACTCTTTGGAGAGGAAAACAATGAATGGCCTTAAGAACAAAATCGAAAAAACTCTGGGAGGCATGAGATCAATTCCTCCCTGTCGTTTTCATGCTTCGTACCGCGAGATGTTCAGCACACAGAAGAGGGATGAACTACTGGTCTTGGATCACTGGTTTTTGATgccaaaaaatgtgaaatgtgcaATATAGCCACTTTACTTTCTGTACACAACAacacaaaatttttttttgctttcgaagagatttttgcttatttattgtttaaatttaGTAGCTCTTCTGTTACATCTGTGCGCAAGTTTCTGTTActtgaatgtatatatattgaaataaataacGTAGCAATTGAGTTGTTATCTTTTGCTTTAATTTATCGACTTTTTTGCTTCAAGTAGGACATTTTTACTCCTACAGTTGGTCTGGTTtggcacagaaaaaaaatccatgcaCACCTAAATGCATCACAATGAACAACATAAGAATATTTGTTTTCTTATCTGCTGATTGGTCAGACCTGTGTGGGGTGGAGCAAgcaagtaaatacaggaagaaggagaGAAGAAGCTGTAATTGGAGAAGTTGTACAGCTGAACCCTTTTAATAGAACATTGACTActgatgaactgagccaatcacaacccTCGCATTAAGTTGACCCTAtcactgcccagccaatcacagctgatGCAAGCAGCCACGCTTATAACTGTGTTAATTGTGGATGTGGAGGTCCAGCGCATTGCAGAAAATACATTTCTATATTGTTATGAAATATTTGCCAAATAAAAGTGAAAtcattgtgttttaa

Function

symbol description
stk19 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in positive regulation of Ras protein signal transduction and protein phosphorylation. Orthologous to human STK19 (serine/threonine kinase 19).

NR:

description
PREDICTED: serine/threonine-protein kinase 19

GO: NA

KEGG:

id description
K08880 STK19; serine/threonine kinase 19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671180.1 True 1661 mRNA 0.39 6 17721129 17731699

Neighbor

gene id symbol gene type direction distance location
cep112 cep112 coding downstream 414053 17103295 ~ 17307076 (-)
LOC103042974 LOC108437161 coding downstream 624304 17045514 ~ 17096825 (-)
LOC103039070 NA coding downstream 775464 16895580 ~ 16945665 (-)
LOC111192875 LOC108437882 coding downstream 1014054 16696081 ~ 16707075 (-)
LOC103027149 LOC103027149 coding downstream 1060622 16654113 ~ 16660507 (-)
LOC111192974 tvp23b,LOC108437154,LOC105899270 coding upstream 51053 17782752 ~ 17797809 (-)
LOC111192966 NA coding upstream 75375 17807074 ~ 17817082 (-)
ush1g ush1g,ush1ga,LOC107556601,LOC107698769,LOC107568596 coding upstream 108480 17840179 ~ 17855162 (-)
hid1 hid1,LOC107710705,LOC107698779 coding upstream 152921 17884620 ~ 17920811 (-)
LOC103047157 socs3,LOC103047157,LOC107552116,LOC107671257,LOC107698761 coding upstream 621634 18353333 ~ 18356495 (-)
G64835 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 non-coding downstream 1218 17690229 ~ 17719911 (-)
G64841 rac1b,rac1,LOC103481976,LOC106531821,LOC102217008,LOC105935606 non-coding downstream 5687 17707996 ~ 17715442 (-)
G64692 NA non-coding downstream 42464 17677102 ~ 17678665 (-)
G64688 NA non-coding downstream 50712 17606894 ~ 17670417 (-)
G64694 NA non-coding downstream 78900 17640160 ~ 17642229 (-)
G64857 NA non-coding upstream 37548 17769247 ~ 17815728 (-)
G64867 NA non-coding upstream 79477 17811176 ~ 17953544 (-)
G64882 NA non-coding upstream 148751 17880450 ~ 17882420 (-)
G64898 NA non-coding upstream 245848 17977547 ~ 17978089 (-)
G64902 NA non-coding upstream 267857 17999556 ~ 17999808 (-)
LOC103043390 NA other downstream 31817 17678814 ~ 17689312 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other downstream 56568 17535296 ~ 17664561 (-)
G64492 NA other downstream 833226 16882335 ~ 16887903 (-)
G64387 NA other downstream 1135482 16585065 ~ 16585647 (-)
LOC103027187 NA other downstream 1853334 15671306 ~ 15867795 (-)
G64886 NA other upstream 196808 17928507 ~ 17931170 (-)
LOC111192976 NA other upstream 893176 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other upstream 906608 18638307 ~ 18650343 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other upstream 1166486 18898185 ~ 19023658 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other upstream 1548603 19280302 ~ 19284032 (-)

Expression


Co-expression Network