LOC111192914


Basic Information

Item Value
gene id LOC111192914
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 24392011 ~ 24397445 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671186.1
ATGGACTACAAACACATCCCTCTTTATCTTCTTGTACAATTTCTACTTTTTACAGTTCATGGCACAGCCAACCTGGAAAAAGAGCATATCAGGACCACCGAGGCCAGTGAAAAACCACCCTaTGGGCCAGTGGGTCATACCATACTTGGTCCAGATGCAGTCACAGTGGGAGTGCCCAGCAGCTTTTTGTGCTCTGCTCAGTGCTCACCTGAATGCAGTTATGCAGTCAGTATTGATAATCACAGTGTGGAGCAAAATGAGCTGGCATTTACCTTAAGCCATTGGGAGGGATCTAAAACAGTGACCTGCACAGCTCAAAACTCTGTCACAGGAAGTTCTTCCACAGTCCGAAAAACTCTGCACATTTTGGAGGGGCCAGTAAACATCTCCATCAGTGGTCCACAGACACTCACTCCTGGTGAGACTCAGAGGTTTCTGTGCACTGCAACATGCAGGCCTTTCTGCATCTACACATGGATTGTTGATGGAGATTCGATCGCTGGCTCTGGAGATGAAGTGGTCTTTAGACCACCTTTAGAAGCCACCTCAGGGACACTCATCTGCAAAGCCACAAACAGCGTTTCTGGGTTGTTTTCTACAACTGTTCTAAAACTAAGCATTCCAAAGAAGAGAATGAGTTTGGAAGAAAAGGAATTTCTTGCTGCCAGCCCTTCTACTGGGGACAAAacctgtaagtaaataaactgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671186.1 True 709 mRNA 0.46 5 24392011 24397445

Neighbor

gene id symbol gene type direction distance location
LOC111192881 NA coding downstream 3315 24384964 ~ 24388696 (-)
atp23 atp23,LOC106609469,LOC106576246 coding downstream 24438 24362007 ~ 24367573 (-)
slc16a7 slc16a7,LOC108248566 coding downstream 123562 24230215 ~ 24268449 (-)
LOC103022829 NA coding downstream 373294 24001682 ~ 24018717 (-)
LOC111193004 NA coding downstream 392511 23995282 ~ 23999500 (-)
LOC103035956 mapk12b,LOC103035956,LOC108442322,LOC108279513,LOC107656379,LOC107579544,LOC107710136,LOC103459704 coding upstream 7719 24405164 ~ 24414312 (-)
LOC103035641 mapk11,LOC103035641,LOC108442323,LOC108279456,LOC107579565,LOC107725929,LOC107656380,LOC107583972,LOC105020226 coding upstream 20054 24417499 ~ 24440903 (-)
LOC107197568 NA coding upstream 47104 24444549 ~ 24447478 (-)
LOC103035119 NA coding upstream 70826 24468271 ~ 24478895 (-)
LOC111193006 NA coding upstream 95559 24493004 ~ 24496246 (-)
G66602 rpap3 non-coding downstream 11429 24373901 ~ 24380582 (-)
G66601 rpap3 non-coding downstream 18731 24368438 ~ 24373280 (-)
G66600 NA non-coding downstream 23655 24368113 ~ 24368356 (-)
G66509 NA non-coding downstream 38308 24353301 ~ 24353703 (-)
G66496 NA non-coding downstream 101221 24290588 ~ 24290790 (-)
LOC111192882 NA non-coding upstream 50233 24447678 ~ 24452700 (-)
G66623 NA non-coding upstream 114715 24512160 ~ 24512552 (-)
G66627 NA non-coding upstream 134826 24532271 ~ 24533872 (-)
G66646 NA non-coding upstream 351018 24748463 ~ 24748736 (-)
G66651 NA non-coding upstream 389095 24786540 ~ 24786761 (-)
dusp16 dusp16 other downstream 1231832 23053273 ~ 23160179 (-)
G66081 bcap29 other downstream 2100329 22290685 ~ 22291682 (-)
G65803 gen1 other downstream 2707183 21629958 ~ 21684828 (-)
ost4 NA other downstream 2817812 21545418 ~ 21574199 (-)
llph llph other downstream 4592409 19795154 ~ 19799602 (-)
G66619 NA other upstream 110389 24507834 ~ 24508281 (-)
G66642 NA other upstream 262579 24660024 ~ 24661902 (-)
LOC103036580 slc25a44,slc25a44a,LOC108432728,LOC108274961,LOC107673271,LOC107727505,LOC107562286,LOC107738649,LOC107680149 other upstream 1119070 25516515 ~ 25530980 (-)
tmem258 NA other upstream 3635256 28032701 ~ 28035961 (-)
LOC103041081 rbpms2,rbpms2a,LOC107381790,LOC103368877,LOC108275203,LOC107560016,LOC107738652,LOC107680137,LOC107086560 other upstream 3723815 28121260 ~ 28132788 (-)

Expression


Co-expression Network