LOC111192915


Basic Information

Item Value
gene id LOC111192915
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 24459403 ~ 24461001 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671187.1
ATGGACGGTCCGGGTTGCCATGGAAACCATGGGAGAGCCCACCGCGGGACAAGCCAGGagtgttattgttatttaataCTCGGGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGCAGCGCGGGGAGTAAATCCAGAAGCGCGGGGAGTAGCCAGGTGAGCCGCTGTAGGAGTGCTCTTTTGACCAACAAACGAGTTACGTTTCAGCTGATCCAGTCTAATAGCCAGGGAAATCAAGTCATTCATGGGAAGACCGTCATCTTTACAAGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671187.1 True 1599 mRNA 0.60 1 24459403 24461001

Neighbor

gene id symbol gene type direction distance location
lrig3 lrig3,LOC104942525 coding upstream 139337 24296917 ~ 24320066 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding upstream 341690 24026461 ~ 24117713 (+)
etv6 etv6 coding upstream 505683 23916306 ~ 23953720 (+)
rerg rerg,LOC107662225,LOC107669035 coding upstream 911146 23451563 ~ 23548257 (+)
lrp6 lrp6,LOC100705426 coding upstream 1374359 23020384 ~ 23085044 (+)
LOC103034593 LOC108442311 coding downstream 49488 24510489 ~ 24517356 (+)
LOC103033942 LOC103033942,LOC108442313 coding downstream 94600 24555601 ~ 24559622 (+)
snupn snupn,LOC107673280,LOC107738646 coding downstream 917436 25378437 ~ 25387120 (+)
ptpn9 ptpn9,ptpn9a,LOC107727494,LOC107673262,LOC107560010 coding downstream 933434 25394435 ~ 25423664 (+)
sin3a sin3a coding downstream 965736 25426737 ~ 25449256 (+)
G66524 mapk12b,LOC103035956,LOC108442322,LOC107658737,LOC108279513,LOC107656379,LOC107710136,LOC107579544,LOC106609457 non-coding upstream 45125 24408520 ~ 24414278 (+)
G66514 NA non-coding upstream 69629 24384919 ~ 24389774 (+)
G66488 NA non-coding upstream 135371 24323810 ~ 24324032 (+)
G66480 slc16a7 non-coding upstream 228217 24223005 ~ 24231186 (+)
G66476 NA non-coding upstream 273020 24186134 ~ 24186383 (+)
G66556 NA non-coding downstream 44340 24505341 ~ 24505541 (+)
G66577 NA non-coding downstream 118152 24579153 ~ 24579353 (+)
G66643 NA non-coding downstream 257596 24718597 ~ 24718895 (+)
G66656 NA non-coding downstream 350414 24811415 ~ 24816069 (+)
G66657 NA non-coding downstream 366540 24827541 ~ 24827807 (+)
rpap3 rpap3 other upstream 76381 24367492 ~ 24383022 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other upstream 739309 23698152 ~ 23720094 (+)
G66303 NA other upstream 975470 23483333 ~ 23483933 (+)
G66296 NA other upstream 1014726 23444174 ~ 23444677 (+)
eps8 eps8 other upstream 1136042 23222514 ~ 23323361 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other downstream 57621 24518622 ~ 24552340 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other downstream 138165 24599166 ~ 24684580 (+)
cspg4 cspg4 other downstream 728184 25189185 ~ 25300875 (+)
LOC111192916 NA other downstream 1619451 26080452 ~ 26092119 (+)
oaz2 oaz2,LOC108432726 other downstream 3688259 28149260 ~ 28220857 (+)

Expression


Co-expression Network