grip1 (grip1)


Basic Information

Item Value
gene id grip1
gene name grip1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 2673173 ~ 3025867 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671228.1
ACTCCACAATGCGCACACACCCTCTTTGGCTCTCGCAcgcactgacacacacacacacaatggacTACTCAGCAGGCGGCGAGTGCTGAAGGCTGGGCAGAGGGAGCCGGGCTGGACGGGGTCTATTCTCTGGGAAGAGTCGGCCAGGTCCGCAGGAGCTGATATTTGACCCATTCCCTATCATTTTAaaccccctcctccctccttGCCTCCTCTGCTGCTCCCTGCCTTCTTCTTTCTTCAGTCTTTAGGAGATCACTCGCTTTCTCTTTTCAGCAGCTCTTTGTGCAGCGGAATACACTCTCACATCGCTGCTGCCGCTACTACTGCCGCCACCGCTGCCAAGACTACCGCTGCTGCTGTCGCTGCTACTACTACCGctactgctgctccagctgccGCTGATTCTTCGCCTCTTCTGCCTCTTCTGCCTCTGCCTCtgactgctgctgccactggagcaggaggaggagtgcGGCAGTTTTGCGTGTAGATCGCTGGAATGGAACGCTTCCTTGGCTTTGTCAAGCAAATTCGCAGGTCCCGCAGACGCAAGGGCAAAAAGTACCGGCCCGAAGAGGATTACCACGAGGGCTATGAGGATGTGTATTACTACGCTTCCGAGCACCTGCACAATGAGGGGCCCTACACTAAGCACTCCAACCCCTCCAGGCCACCAGATGGAGCTCTGGCCATCAGACGACAGAGTATTCCAGACGAGTTCAAGGGCTCCAGCATCGTGGAGCTGATGAAGAAGGAGGGCACCACCCTGGGCCTGACCGTGTCCGGCGGCATCGACAAGGACGGCAAACCCCGCGTCTCCAACCTCCGGCAGGGCGGCATCGCGGCCAGgagCGACCAGCTGAACGTGGGGGACTACATCAAGTCTGTGAACGGCATCAACCTGACCAAGTTCCGTCATGACGAGATCATTAGCTTGTTGAAGAACGTGGGGGAGCGAGTGGTCCTGGAGGTGGAGTACGAGCTGCCACCTGTCTCTGTTCAGGGTTCAGGTgtgatgtttaaaaatgtgGAGGTGACACTGCATAAAGAAGGCAACACATTTGGATTCGTCATCCGAGGAGGAGCCCATGAAGACAGGAACAAATCCCGTCCCGTTACCATAACAACTATCAGACCCGGCGGCCCGGCTGACAGggAAGGCACCATTAAACCAGGAGATCGGCTGCTGAGCATCGATGGCATTCGCCTACACGGCACCTCCCACGCAGAGGCCATGAGCATCCTCAAGCAGTGCGGCCAGGAAGCCACGCTCCTCATCGAGTACGACGTGTCCATCATGGACTCCATAGCCACTGCTTCAGGCCCGCTGCTGGTGGAGGTGGCCAAGCCTCTGGGCTCCAGTCTGGGCGTGGCCCTCTCTACCTCCATGTACTGCAACAAGCAGGTCATCATCATCGACAAGGTCAAGCCAGCCAGCATCGCCGACAGGTGCGGAGCTCTGCATGCAGGTGATCACATCCTGTCGGTAGATGGCACAAGCATGGAGTACTGCACACTGGCTGAAGCCACTCAGCTATTGGCCAGCGCCTGTGAGCACGTCAAAATGGAGATCCTTCCTCACCACCAGACCAGACTGGCCCTTAAGGGCCCAGAGCACGTCAAGGTGCAGAGGAGCAACCGGCCACTGCCCTGGGAGTCCGGcaccaacaacaacagcaacttCCTCCCCTACCAGCACTATAACACCTACCACCCCGACCAGTCCCGCAGCCAGGCCAAGCAGAAATCCTCTCCGAACAACCCCCctcTGGGTTCGTCCTTCTCGCCCACCTCCATGAGTGCCTACAGCCTGAGCTCCCTCAACATGAGCACACTGCCCCGTAACATGTATCCCACGAGCCCTCGTGGCACTATGATGAGGAGGAAGCTGAAGAAGAAGGACTACAAAAGCTCCTTGTCTCTAGCCTCCAGCACTGTGGGCCTGGCTGGTCAGGTGGTCCACACGGAGACCACTGAAGTGACTCTCATCAGCGACTCCGTCATGGGATTCGGAATCCAGCTCCAAGGAGGGGTCTTTGCCACGGAAACGCTGACCTCTCCGCCGCTCATCGCCTACATGGACCCCGACAGCCCAGCCGAGAGGTGCGGCATCTTGCAGATCGGTGACCGCATCCTGTCCATCAACGGGATCCCCACCGAGGACAGCACGCTGGAGGAGACCAACCAGCTGCTGCGGGACTCCACCATCACCAGCAAAGTCACGCTGGAGATCGAGTTTGATGTAGCAGAGTCTGTTATCCCAAGCAGTGGCACCTTCCACGTGAAGCTACCAAAGAAGCCGGGCGTGGAGTTAGGCATCACCATCAGCTCTCCATCTAACAGAAAGCCGGGGGACGCTCTCATCATCTCGGATATTAAGAAGGGCAGCGTGGCACACAGGACGGGAACTCTCGAACTTGGTGATAAGCTCTTGGCCATAGACAACATCCGCCTGGATAACTGCTCCATGGAGGACGCTGTCCAGATCCTACAGCAGTGCGAGGATTTGGTCAAGCTCAAGATTCGTAAGGACGAGGACAACTCAGACGAGCAGGAGACCTCCGGGGCCATCATCTACACAGTGGAGCTGAAGCGCTACGGGGGCCCTCTGGGCATCACCATCTCCGGCACCGAGGAGCCCTTCGACCCCATCATCATCTCCAGCCTCACTAAGGGCGGCCTGGCCGAGAGGACGGGTGCGATCCACGTTGGAGACCGCATCCTGGCCATCAACAATAACAGTCTGAAGGGCAAACCTCTGAGCGAGGCCATTCACCTGCTCCAGATGGCTGGAGAGTCTGTTACACTCAAGATCAAAAAGCAGGGAGAACTGGTGAGTCCAAAACAGCCATCTGTGTCTGGGCGTCTGGGTGAGCTGAGTGATGTGGAGGATGAGAATCAGAGCGGCCAGAAAACAGGCAAACTGTCGGACATTTACTCCACCACCATCCCCAGTGTGGACAGCGCTGTGGAATCCTGGGACGGCTCTGCCATCGACGCCACCTTCAGCACAcaagCTCCTACAGGCTTCCAGGCATCTGGCTATAGTTTCCACAGCCACGAGTGGAGGAACGCCAAAGCTAGCCGGGGCAGCTTGTCTCCGGTCAGCAGCAGCCGCCAGAGAAACAACATCCTGCAGGACCTGGGCCTCAGCGATGACGAGTGGGACAGACCCACGGCTAGCGGGTTCACTGTAGGCCACGACGGTACAGAGCCAGACCAGGAGGAGAACTTCTGGTCCCAGGCACTGGAGGACCTGGAGACGTGCGGCCAGTCAGGGATCCTCCGGGAACTTGAGGACAAGCCAGACAGGCTTCTGACTAAGAGAAACCTGGCCATCTTGGCCACCATCATGTCTGGGAGCACGCTCAGTCTGAACCACGACCCGGCACCCACACGGAGCCACCTGGGAAGGCAGGCCATCCAGGAGCGTGGCAGCAACAGGCCTCAGTACACCCAGGCCAACCGCAGCAACACACTGCCCAGTGACGGTGGCCGCAAGGCCTTTGCCATGAGGAAGATGAAGCAGGAGATCAAGGACATCATGTCGCCAAACCCAGTGGAGCTGCACAAGGTGAGTCTGTTTAAAGAGTCAGACCTGGAGGACTTTGGCTTCAGTGTGTCCGACGGGCTAATGGAGAAGGGCGTCTATGTCAACAACATCCGTCCAGGGGGGCCTGCAGAAGTGGGGGGGTTGAAACCATACGACAGGCTGCTACAGATCAACCACGTCCGAACCAGGGACTTTGACTGCTGCTTGGTGGTTCCTCTCATTGCCGAGTCCGGAAACAAACTGGACCTGGTCATCAGCCGGAACCCAACTTCTGTGCCAGGATCTGAACTAAACCAGTTGCCCAACGACGAGCCAGTGGACTGGACTGACCTTACCGAGCCCCTCCCACAAGCGGGAACAGGACAGGAGGCTGGCCAGCAGAACTCCTTGCTGGCGGGCGTGGATGACAGAGACCCCAACAAGACCTTATAGCGGAACCTCCCGCTCCCCCTCCCCTCCTCTCCGGCACAGGCAGACGAGTGCTCCTCATGGTGCTAACTGAACCCCTCCCGACTGCTCCCCACCCACCACCTGCTGGGAGTGAGCGTGTCGGAGCCTGTCCGTGATATAGCACACCCAGTCTCCTCCCTGAGCCAGAGCATGAGCCACACTGACTGGGAGAGCTGTCCTCTCCATGCCTGCTGGGTGGGttgcgtatttttttttttttttttttttgactcctGTGGAAATGACACTAACTAATGgaggaagaccataatgacctctgaactgaatactgaactgggaaaaaaaaaaactaaaaagtgaggagagaatcagaaaaataacaaaacagtgcCATCCTTCATTTTTATTGCCAATAAACTGAACTAGTTTTAgggaagaacaaaaaaaaaaacgtgaagcAAAAGAAGCGAAAGGAAACATTGAGACGTTTACACATGATGTTGGActggcctctctctctgtctgtatgtgtgtgtgtatttgagaaCGAAAGCTCCTTATGTGAGCCTTCttcacaagtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgttcTTACGGACATTCTTATATACAAGTCTAGGCCAGAGTGATTCTCCACATGCTCTGTTTTGGAGTTTTGGAATGGTCTCTCATGGCAAAGTCCTAAACCTCAGCTGTGTCCACCTTGTACCCTGGAATCGATTCCTCTAGCTCCATTCTTTTGTAGCGCTGAATCCCATACGTGTGTATAGTGAACACCCCTGTTAAATCCTCACAAGTGATGCCAAGGCCTGAGTTCCCTGCCTTACTCATTCagtggaaagaaaaaaacaaaaagagtttGGCACGAGCTCAGCACAACCAATCCAATagccattttttaaaacgtggcaaaaagataaaaaataaaaacgtaatAATGAGTGAGTCAGcctgagtgggttgggtagcaGCATAATGCATGAgaccttttttttctgaactacTATTTTGTAACGGTAGACTACGTACAAAACGTAATGTACAAAAAGAGAACTTGGCTACATGtagttttaaaaagagaaaataagaagaCACAAAAGAAAACGAAAACCCTCTAAACAACACACAAAGGCCATGCCATCATCATTTTTATTGCAGGTTTTGCTTGCTGGTGTAAACActgatctaatctaatctaatctatctaatatCATTGTTTAGACCTTGATTTCACATCGAATTAGGAGGATTGTTTCATTTTGCTACTGAAAGGTTGGTATCTAAGGCACCTTATCTTAGAATTGGAcagatttctatttttattagtaaagGGAAGTGATTTATACGTGAGAGGGGAGCAAATGTTTGCAATCTGAGTGATGGGGAAAGGGGCACACTGGTACACTAAGCAATCGGTTACCGAAAAACACCCTTTGTGTATCAGATGATTGATGTATTTTGGTTGGAAAGAGGTGTTTTGATGTACCAAGCAGTAGGTCTAGTTAAACCCCCAGGCATGTGTTCCATTTCGGGAGAATTCGATTACTAGCACAAAGCAAAGCAGAGACCAAATATCCGCTTCACGCTGGCCTAAATCGGGCCTTTTACCAGATTTAGAGAACGGAAACTGACACATCGCTCCTGAGCGATGCTGGCAACCAGAGAGTTGTCTATTAAAGCATAGAAGAGAATAAGCGTGCagtgagaataacacagacCACTACACTGATTTGTAGCCGTCAAGACCACTTGTTCTTCACTCTTGTTTTTGACGTACAGTGCGGAAGCAGCTCCCATCCCAACATCACTAGAAAGGGgggaaaataaacaattttttaaagtgtccagCATGAGGTTGTCAACACACACAAGGCTCAAATCAACTTCTAGACTCTAGACTATAATCTAGACTATACCACCCGTTCCCCCGACACATCCCCCTGTTGTTTaagtgaatatgaacttatgcTAATCTACTGTATGTGGTAATGGTATGGTTTtgtatgttaaaatgttttgttcttttgttttttttctttttttttcttcagaggGTGAAAAAAGCCCAAAGGGTGTACAAATCATttgtaaagagaaaaaaaagggttaaaaaaaaaaaagataatggcACTTGTGTGTTAAATCATGTGAGAATGGGGTTTGTAAGGTGAGTCGTTGCCTACCTACCATACACAATGGTAAAACATCAAGGAAACTTGATACTTCACACAAAAGAACtgtagctcaaaaaaaaaaaacgttagagagtaaaataataacaataataataataataacgctaataaaaataatgtgtcCATAAGCACATATGCTGCACATTATGGCAACACATTCTTTCACCCACCTGTGTGTGTAAAGTCGTGGCTTTTGATGAGTGATGTTACTACCCTTGTCGTCCGTGCTCACACACCCTGTCTACTCACTATTTAAAATGGCACGTAGCGGTCCAATCTGATTACCGGTCATAATCTCATCAGGGGGACACTCATGTGGGATTATCTTTTACCgagactgtttaaaaaaaaaaaaaaaaaaagcaactgtGTTGTTTTTCGTTTGTTTTCTAAAGTCCCTTCAGGTACGGGTTCATTCCCCAAAATCTCATGCACTGGATTTTCTGAGATCGTTAGCGTTCTGCTGACATGCCGACGTGTCGCATGCTGAATTCTGACGGGCGAGGCCTGATCCAAGAGCAGGTTTTCACTGTAAGCGTTGTGTCGTCCGATGCGTGGCTTTGTCCGTGACTTACGTTTGACATGACATCACTGTGTTACAGCAAATAACATGTAGTCACATGCAAAATGTTTTAACttacttatttctttttttttccttgctgttgatgatgatgatgataatgatgataatgcaGTTGATCTCATTTTTATGTTCCTTTTGTGGAATCATCTAAGTGGATTTAAGCactgccagttaaaatagtggGTATCCATTTTCAGTGTATGATGAATTAATGAATCAATTCCACAGTTATGTCCctgaaatattgtatttttatttctaatggaCAGGTATTATGAGCTGTAAAGTATTTTTGTACAAATTTAATACTTTGTTAGCATGATATTTATCGTCTATGTATAACTTTGGGGATTCCTACAGCTGTAAACCTTTGTATGGCCaacaaaaagagaaacaataaaaagataCAGAGTGGGCACATTGTGGTGAA

Function

symbol description
grip1 Predicted to enable glucocorticoid receptor binding activity. Predicted to be involved in neurotransmitter receptor transport, endosome to postsynaptic membrane. Predicted to act upstream of or within dendrite development. Is expressed in brain; eye; median fin fold; and somite. Human ortholog(s) of this gene implicated in Fraser syndrome 3. Orthologous to human GRIP1 (glutamate receptor interacting protein 1).

NR:

description
PREDICTED: glutamate receptor-interacting protein 1 isoform X6

GO: NA

KEGG:

id description
K20251 GRIP; glutamate receptor-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671228.1 True 7199 mRNA 0.50 26 2673173 3025867

Neighbor

gene id symbol gene type direction distance location
tmbim4 tmbim4,LOC107587136,LOC107655596,LOC107567270,LOC107757272,LOC107694279 coding downstream 4675 2661803 ~ 2668498 (-)
lemd3 lemd3,LOC106576661 coding downstream 60359 2600412 ~ 2612814 (-)
msrb3 msrb3,LOC107725596,LOC107757268,LOC107587134 coding downstream 75506 2574909 ~ 2597667 (-)
LOC103031987 NA coding downstream 201110 2466202 ~ 2472063 (-)
irak3 NA coding downstream 221271 2438077 ~ 2451902 (-)
LOC103044476 NA coding upstream 441335 3467202 ~ 3471553 (-)
rint1 rint1,LOC107725664,LOC107733011,LOC107553890,LOC107664862,LOC107695894,LOC107590313 coding upstream 669320 3695187 ~ 3703230 (-)
LOC103030485 NA coding upstream 808465 3834332 ~ 3838502 (-)
LOC103036484 NA coding upstream 829675 3855542 ~ 3865736 (-)
LOC103036181 LOC108438810,LOC108279896 coding upstream 842871 3868738 ~ 3889640 (-)
G61425 NA non-coding downstream 15698 2655787 ~ 2657475 (-)
G61361 NA non-coding downstream 99664 2572697 ~ 2573509 (-)
G61359 NA non-coding downstream 137240 2535723 ~ 2535933 (-)
LOC111192931 NA non-coding downstream 587298 2071373 ~ 2085875 (-)
G61265 NA non-coding downstream 615841 2057120 ~ 2057332 (-)
G61559 NA non-coding upstream 218989 3244856 ~ 3245152 (-)
G61561 NA non-coding upstream 240771 3266638 ~ 3267010 (-)
G61595 NA non-coding upstream 316825 3342692 ~ 3342998 (-)
G61606 NA non-coding upstream 362766 3388633 ~ 3388871 (-)
G61609 NA non-coding upstream 368911 3394778 ~ 3395857 (-)
LOC103031776 NA other downstream 138820 2464834 ~ 2534353 (-)
LOC103032312 LOC103032312,LOC108426389 other downstream 215047 2454547 ~ 2458126 (-)
G61251 mkrn1 other downstream 679315 1984478 ~ 1993858 (-)
G61587 NA other upstream 288286 3314153 ~ 3315239 (-)
mdm1 NA other upstream 503653 3529520 ~ 3548702 (-)
G61676 NA other upstream 624978 3650845 ~ 3658268 (-)
cdpf1 cdpf1,LOC107695897 other upstream 814734 3840601 ~ 3846469 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other upstream 1309251 4335118 ~ 4426156 (-)

Expression


Co-expression Network