arhgap8 (arhgap8)


Basic Information

Item Value
gene id arhgap8
gene name arhgap8
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 9435114 ~ 9459694 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671317.1
AAAACAGCTAAAGCTGTAGCTAGTGCGCATGCGCAGCGGCCGGTAGGAAGTTTGGAGCAGTCAGTCGTAGCACCTGGTAACGACATGAAGGaattTACTGACTGACTTGAGTCCAACTGTGAAATCACCCCCCCATTTCTTTTCCATCATGATCTCAACAAGTGATTTGGAGCAGTTGGCAGAAATAGAGCTGCAGAAAGATGAAGAGGAGCAGGGGAATTCTCCAGCGTACCCTGTAGCGCCATCCAGTGGCAATGCCTGTGAAGACAAGAGCCATCCCTACTACGATGTTGCCAGACATGGCATCCTCCAAGTTACAGgtgATGATAAATATGGCAGAAAGCTGATTATTTTCAGCAGCTGCTGCATGCCTCCATCACATCAGCTCAATCACCACAGACTGCTGGAGTATCTCAAGTACACTTTGGACCAGTATGTGGAAAGTGATTACACAGTGGTCTACTTCCACTACGGCCTGCGCAGCATCAACAAGCCCTCTCTACGCTGGCTCCGAGACGCCTACAGGGAGTTCGACAGAAAATATAAGAAGAATCTCAAAACCCTCTACGTGGTCCATCCAACAAACTTTATTAAAGTCATATGGAACATATTCAAACCTGTAATAAGccACAAGTTTGGCAAGAAGTTAACGTACGTGAACTATCTGGCAGAGCTGAGGGAGCACCTCAACTACGATCAGCTCATCATCCCACCAGCAGTACTGAGGCATGACGAAGAGCTCCGGGCTGCTCAGAAAGGAGGACCGCCCCCTCCAGCGAAGGTCCCGCCCCCAAGACCCCCTCTGCCCACACAGCAGTTTGGAGTGAGCTTACAGTACATTCgagagaaaaacaacaacacattgATACCCCCAGTAATGTTTCAGACTGTGTCATACCTCAAACTCAAAGGCTTGAAAACAGAAGGAATCTTTCGAAGGTCAGCCAGAGTGCAGCTTATCAAGGACATCCAGAAACTCTATAACCAGGGGAAGCCGGTTATCTTTGACCAGTACTCTGATGTGCACGTTCCTGCTGTGATCTTGAAGACGTTTCTACGGGAGCTACCAGAGCCAGTGCTCACCTTCACTGTATACAACCAGATTCAAGAACTTACAAAGGTGGAGAGCAGCCTGAGGGTTTCCCGGTGCAAGAGGATTATGGAGTCCCTCCCAGAGCACAACTTCATCGTTGTCAAGTATCTCGTCTGCTTCCTGCATATGGTCTCACAGGAGAGCATCAGTAATAAGATGAGTTCCTCTAATCTGGCGTGTGTGTTCGGGGTGAACCTGGCCTGGCCTCCTCAGGGAACCGTGTCCCTCAGCGCTATCTCTCCCCTCAATATGTTCACCGAGCTGCTCATTGAGCACTATCACACTATCTTCAGCTCACGCTGCCCACCACAACAGGTACTCCCCTGAGCGGACTCTCATCAGGCTCTGCTAGACCACCAGTACAACCCACAGTCTTGCCGAATTGTTtttgctgttattgttattgattgGATCTCCAATATGAAGTATTGATTCTGGAGGGCCTGACTGGGCGAGGGATCAAGAGTCTCAGCAGGCCAGAACACTAACCAATTGCATTTGCAAGTATTTTGTATACTGTGTATGTCTGAAAACTACATTTGTAACATactgaaacacatttttattctgtaaagtcttttaatattgtgaatatTTTAATTGCTTAGGACTTACTGTTCGCTTTTCTTTTATATGACACTAACCAAGGATTTGATTGCGCCACGTTTATTgtgaaataacattaaaatgcatttactgCACAGTAATGCTATATACAGTGTTGTAGCCAAGAAGCATAGCTTTTTTTATACACTAATATCTTGCTGAAGCGTCCTGCTCAAGACCAGCTTTTGTTGGTTTAGGCTGGTTTAGGCTGGTTTTTGATAGTCGATGTGGTTCAAAAGCTGGTTATCCAGTTTTATCCAGACAAATTTTACAGGGATTAAACTTGATTATACTGGTCAACCATGGTAGTAATGCTGGTCAAACAGCATGGTTaggcttggtcatactggtttgttagcttggtca
>XM_022671318.1
TGACTGTTTAGTGAGGGGGTAAAGCGCATTTCAGGTGTTCTTTTATCGCTAACAGTTAACTAATGTTAAAATTCAAAACACTCAGGAGGAGCTGctgtcctcacacacacaacagcccGGAGACTGACTATAGaattTACTGACTGACTTGAGTCCAACTGTGAAATCACCCCCCCATTTCTTTTCCATCATGATCTCAACAAGTGATTTGGAGCAGTTGGCAGAAATAGAGCTGCAGAAAGATGAAGAGGAGCAGGGGAATTCTCCAGCGTACCCTGTAGCGCCATCCAGTGGCAATGCCTGTGAAGACAAGAGCCATCCCTACTACGATGTTGCCAGACATGGCATCCTCCAAGTTACAGgtgATGATAAATATGGCAGAAAGCTGATTATTTTCAGCAGCTGCTGCATGCCTCCATCACATCAGCTCAATCACCACAGACTGCTGGAGTATCTCAAGTACACTTTGGACCAGTATGTGGAAAGTGATTACACAGTGGTCTACTTCCACTACGGCCTGCGCAGCATCAACAAGCCCTCTCTACGCTGGCTCCGAGACGCCTACAGGGAGTTCGACAGAAAATATAAGAAGAATCTCAAAACCCTCTACGTGGTCCATCCAACAAACTTTATTAAAGTCATATGGAACATATTCAAACCTGTAATAAGccACAAGTTTGGCAAGAAGTTAACGTACGTGAACTATCTGGCAGAGCTGAGGGAGCACCTCAACTACGATCAGCTCATCATCCCACCAGCAGTACTGAGGCATGACGAAGAGCTCCGGGCTGCTCAGAAAGGAGGACCGCCCCCTCCAGCGAAGGTCCCGCCCCCAAGACCCCCTCTGCCCACACAGCAGTTTGGAGTGAGCTTACAGTACATTCgagagaaaaacaacaacacattgATACCCCCAGTAATGTTTCAGACTGTGTCATACCTCAAACTCAAAGGCTTGAAAACAGAAGGAATCTTTCGAAGGTCAGCCAGAGTGCAGCTTATCAAGGACATCCAGAAACTCTATAACCAGGGGAAGCCGGTTATCTTTGACCAGTACTCTGATGTGCACGTTCCTGCTGTGATCTTGAAGACGTTTCTACGGGAGCTACCAGAGCCAGTGCTCACCTTCACTGTATACAACCAGATTCAAGAACTTACAAAGGTGGAGAGCAGCCTGAGGGTTTCCCGGTGCAAGAGGATTATGGAGTCCCTCCCAGAGCACAACTTCATCGTTGTCAAGTATCTCGTCTGCTTCCTGCATATGGTCTCACAGGAGAGCATCAGTAATAAGATGAGTTCCTCTAATCTGGCGTGTGTGTTCGGGGTGAACCTGGCCTGGCCTCCTCAGGGAACCGTGTCCCTCAGCGCTATCTCTCCCCTCAATATGTTCACCGAGCTGCTCATTGAGCACTATCACACTATCTTCAGCTCACGCTGCCCACCACAACAGGTACTCCCCTGAGCGGACTCTCATCAGGCTCTGCTAGACCACCAGTACAACCCACAGTCTTGCCGAATTGTTtttgctgttattgttattgattgGATCTCCAATATGAAGTATTGATTCTGGAGGGCCTGACTGGGCGAGGGATCAAGAGTCTCAGCAGGCCAGAACACTAACCAATTGCATTTGCAAGTATTTTGTATACTGTGTATGTCTGAAAACTACATTTGTAACATactgaaacacatttttattctgtaaagtcttttaatattgtgaatatTTTAATTGCTTAGGACTTACTGTTCGCTTTTCTTTTATATGACACTAACCAAGGATTTGATTGCGCCACGTTTATTgtgaaataacattaaaatgcatttactgCACAGTAATGCTATATACAGTGTTGTAGCCAAGAAGCATAGCTTTTTTTATACACTAATATCTTGCTGAAGCGTCCTGCTCAAGACCAGCTTTTGTTGGTTTAGGCTGGTTTAGGCTGGTTTTTGATAGTCGATGTGGTTCAAAAGCTGGTTATCCAGTTTTATCCAGACAAATTTTACAGGGATTAAACTTGATTATACTGGTCAACCATGGTAGTAATGCTGGTCAAACAGCATGGTTaggcttggtcatactggtttgttagcttggtca

Function

symbol description
arhgap8 Enables GTPase activator activity. Involved in positive regulation of ERK1 and ERK2 cascade. Predicted to be located in cytosol.

NR:

description
PREDICTED: rho GTPase-activating protein 8 isoform X3

GO: NA

KEGG:

id description
K20633 ARHGAP8, BPGAP1; Rho GTPase-activating protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671317.1 False 2065 mRNA 0.46 13 9435114 9459694
XM_022671318.1 True 2107 mRNA 0.45 13 9435114 9459501

Neighbor

gene id symbol gene type direction distance location
nup50 nup50,LOC107699201,LOC107719874,LOC107562145,LOC107601009 coding downstream 168235 9252337 ~ 9266879 (-)
LOC103042700 LOC108425355,LOC108279935 coding downstream 207866 9223714 ~ 9227248 (-)
LOC103045460 NA coding downstream 242549 9170991 ~ 9192565 (-)
LOC103042080 LOC108425318 coding downstream 844798 8587268 ~ 8590316 (-)
LOC103041774 NA coding downstream 881549 8542470 ~ 8553565 (-)
fbln1 NA coding upstream 391236 9850930 ~ 9864019 (-)
LOC103036113 LOC108279889 coding upstream 405666 9865360 ~ 9887488 (-)
LOC103042295 LOC108425305,LOC105896948,LOC105020256,LOC108279434,LOC105913407 coding upstream 526610 9986304 ~ 10032671 (-)
creld2 creld2 coding upstream 935236 10394930 ~ 10405872 (-)
zbed4 zbed4,LOC107735570 coding upstream 964895 10424589 ~ 10433454 (-)
LOC103022044 NA non-coding downstream 16292 9415043 ~ 9418822 (-)
G63034 NA non-coding downstream 25566 9406405 ~ 9409548 (-)
G62950 NA non-coding downstream 414129 9020489 ~ 9020985 (-)
G62907 NA non-coding downstream 787818 8646885 ~ 8647296 (-)
G62858 NA non-coding downstream 1000718 8433715 ~ 8434396 (-)
G63041 NA non-coding upstream 22506 9482200 ~ 9482517 (-)
G63042 NA non-coding upstream 26328 9486022 ~ 9486233 (-)
G63105 NA non-coding upstream 177994 9637688 ~ 9642240 (-)
G63107 NA non-coding upstream 187858 9647552 ~ 9650188 (-)
G63125 NA non-coding upstream 431322 9891016 ~ 9891758 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 1261298 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 1815682 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 2575444 6787342 ~ 6859670 (-)
G62484 NA other downstream 2697166 6671610 ~ 6737948 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other upstream 158967 9618661 ~ 9622788 (-)
G63217 NA other upstream 855105 10314799 ~ 10411231 (-)
G63516 NA other upstream 2860861 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 2905774 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 3346277 12805971 ~ 13027498 (-)

Expression


Co-expression Network