itih5 (itih5)


Basic Information

Item Value
gene id itih5
gene name itih5
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 14015116 ~ 14042802 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671386.1
GGGTCTTGCTCGAGCTCCATCTTCAGTTCCACTGCGCTCCAGTGCAGCTCGTGCGCAAACACCCACCGAAACGGGTGCCTCGTTCCATCGCGTGAGAACCCTCCAGCCCTCCCCTGGCCATGCAGCTCGCGGTGCTGGCCCTGTGCCTCAGCCAGGTGGCGAGTTTTGCGCGAGCTGAGGATGCTGATGCCGCAGAGTTGTCGGAGTTGTCGGAGTTTGAGGATGGCGCGCTCTCCGCACTGGACCTGATCGCAGTTCCACGGAGAGTCGCGCGCCAGGTCAAGAATATACTGACTAAGGAAACTAAACCCCACATTCAGGAGCTCTCAGTGCAGACCACCATCATCTCTCGCTATGCTTTTACTGCAGTGTCCTGCACCATGTTCAACAGGCACACTGCTGCCACACAGGGGGTCTTCCAGTTCCAAGTTCCACAGGCTGCATATATCTCCAACTTCACCATGATTGTGGGAGGAAGAGTCTTTCCCAGTCAGATAAAAGCAAAggagaaaaaagtgaaaaaggatAAAGAGCAGAACGGCAAATCAAAGACCAAGGAGGCGGCAGAGGTCAGtgatggagagatggagacgTTCCGCATGGCCGTTACCATTCCAGGACGGAACCGGGCCGTATTCCTCCTAACGTACGAGGAGCTGCTGCAGAGGAGACTGGGTTATTACGAGCATGTGACCAGCGTCCGGCCTTTACAACTGGTCAGCAAGCTCAGTGTGGGCGTTACCATAGTGGAGCATTCACGCATCAAATACCTGGAGGTGCTTCCTTTACGGAAAAGCAAAGCactgacatccagcagcagcagcaagacAGACGGTAAAGCGTCTGCGCCAGTTTCCACCGTGATCAAACAGAACGAGACCTTCTGCAGGATCACCTTCACCCCCAACATCGTTCAGCAGGTCAAAATCGCCAACAATGGCATGCTGGGAGATTTTGTGGTGCGTTatgatgtagagagagaaatggggATTGGAGATATTCAGGTTCTGGATGGACATTTTGTGCATTATTTTGCCCCCAAAGACCTGCCTGTCGTACCCAAGAATGTGGTGTTTGTTATTGACACAAGCGCCTCCATGGTTGGGACCAAAATCagacagACTAAAGATGCTCTATTCACCATCCTGAGGGACCTGCGTCCCAATGATCACTTCAACTTCGTAACCTTTTCCAATCGTATCCGGGTGTGGCAGCCGGGCCAGCTGGTACCTGTCACTCCAAACAACGTGCGAGACGCCAAGAAGTTTATCTACATGATCTCACCCACTGGAGGCACAGACATCAACAACGCCATTCAGACCGGCTCCTCGTTACTGCGGGATTACCTGGCCTCCACTGTAGACTCCAACCACAACAGCGTGTCCCTCATCATCTTCCTGACGGACGGACGGCCCACGGTGGGCGAGGTGCAGTCCCCCAACATCCTCGGGAACACGAAGACGGCGGTGCAGGAGAAGTTCTGCCTCTTCACCATCGGGATGGGTAACGATGTGGACTACAGGCTGCTGGACAGAATGGCTCTGGAGAACTGCGGCACCATGAGGAGGATCCCGGAGGACGCTGACGCCAGTGCCATGCTGAAAGGCTTCTATGCCGAGATCGGTACCCCTCTGCTCTCAGACATCCGTGTGGATTACTCTGAGGATGCTGTGGAATACGTCACCCAGCACCACTTCTCCAACTACTTTAATGGCTCTGAGATCGTGGTGGCCGGCAAgctgaccaatcacagttcGGATTCTCTCCACGTGCAGGTAACGGCTAGCAACAGCGATCGCAGCCTGCGTCTGGAGACGGACGTGCAGCTGACCGATCGTGAGCGGGAAACCAAGCGTCGGCTGGCCGAGGCGGAGGCGGGGTCAGATGCAGACGGCTACGTCGAGCGCCTGTGGGGGTTTCTGAGTGTAAAGGATGGTCTGAAGGAACGACTGCGCAGCCAGACgagcagcgagagagagaagttCACCCAGCAGGCCGCCAACCTCTCGCTGGAGTTCAACTTCCTCACGCCGCTCACAATGTCCGTGGAGACGCCGCAGTACTAGCCAGATGGCACTTTAGCAGGGGTGGAGCCTACGAAAGCACCGACCAGCACTGATTCagagtcagccaatcagctgcCAGAAGAGGAGCAGCTGGGGGACACACCCCAGAGCATAACCAGAAAGAAGGAGCAGCCTGGGCGGAGTCCAGAAGCTGGCAAAGCAAAAAATGGAGTTAAAAAGACCGCCAAAACGTCTGTCACCCTCTCCAAAACATCGGCGGATGGAGATCCTCACTTTGTGGTGGATTTCCCCCTCAGTAAGCTCACGGTGTGCTTCAACATTAACGGGCAGCCGGGAGACGCCCTGCGACTGGTGACTGACCACAAACACTCCGGTGTGACAGTGAACGGTAAGCTGATTGGAGCTCCAGCGCCGGCCGGTAGTCACAAGCAGCAGCGTACGTACTTCAGCTCCATCATCGTGGTGGTGGATCGACCCCGGCGCTCGTATATCGAGGTGACCCCGAGGAAGGTCATCCTGGACGGCCGGGACCGCATGATCCTCCCCTGCAGCTCCAGCATCGCCGTGGAGTCCGACAGTCTGGGCGTGGCCATTGTTGCTAACGCCAACATTACAGTGACCATTCAGGGAACCATCCAGTTCATTATCCTGCTGCATAATTACAAAAACCCCGCCCCCTATCAGCGAGACCACCTGGGATTCTACATAGCGAAGAGCGGGGGTCTTAGCAAGAGCACACACGGGCTGTTAGGTCAGTTTCTGTATGAAGAGGTTGGATTAACTGAAGTTCCTGGAAACGTCACTGTAGCAAAAGGAAACAGCACACAGGAAGCTAACGCTACTGCTGGCCCTCCGGAGTCCGGTCTGAAGGTGCTAAAGGTGAAAGAGCGAATCGTTAATGTGGTGAAGAAGAGCCGGCGGATCTATTCCGGCACTCAGACAGTGGACTGCTGGTTCGCCAAAAACAACGCTGCTAAACTTATCGATGGACAATATCAGGACTATGTAGTGTCCCACCTATTCGACACAGGGGACTGGCCTCATTCGGCCAATACAGCcaatacacactaaaacacacatattcactatatacatactgtatacacactctcaaacaccCACCCCCATACACAGATTTTGAATGACAGTTTCTGAATTACGGGAACCTCCACTCAAATTTCTACATTTTGTAACACTGATATTACTCACATTGGaaaatttttattcattttacacttttttatttgcaataccATTCCACTGTTTTAATATTTcctatgatttattttttagatcaGCAGAAATTATCCTAAACATCCATTAAATTTTAGATTATTCCATCACCTGTAAAGTTACCATTTGAGAGATGTGAGGTTTTgttatacagatatacagtatgtctATTGTATCTGTGCTCCGTTTTGCCTTACTACTACTGCATAACTTaactgtttatatatgtttacattttgtacctaatctaaatctaatgtaatataaagaCATTCAATGTATAATGGTTTTATACTGGTTCtgtaaattaaatctttttaatgaataatCTATG

Function

symbol description
itih5 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within hyaluronan metabolic process and negative regulation of peptidase activity. Predicted to be located in extracellular region. Orthologous to human ITIH5 (inter-alpha-trypsin inhibitor heavy chain 5).

NR:

description
PREDICTED: inter-alpha-trypsin inhibitor heavy chain H5

GO: NA

KEGG:

id description
K24515 ITIH5; inter-alpha-trypsin inhibitor heavy chain H5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671386.1 True 3594 mRNA 0.51 17 14015116 14042802

Neighbor

gene id symbol gene type direction distance location
pfkfb3 pfkfb3 coding upstream 208162 13786246 ~ 13806954 (+)
rbm17 rbm17,LOC107748463,LOC107755150,LOC107663450 coding upstream 241528 13758328 ~ 13773588 (+)
tmcc3 tmcc3 coding upstream 381881 13591612 ~ 13633235 (+)
ndufa12 ndufa12,LOC107667714,LOC107755161 coding upstream 450016 13561436 ~ 13565100 (+)
LOC103030426 nr2c1,LOC107689225,LOC107755159 coding upstream 457526 13544952 ~ 13557590 (+)
itih2 itih2,LOC107748478,LOC107666937 coding downstream 13983 14056785 ~ 14081113 (+)
atp5c1 atp5c1,LOC107728502,LOC107748457 coding downstream 47530 14090332 ~ 14098546 (+)
taf3 taf3,LOC107748456,LOC107555823,LOC107675973 coding downstream 60137 14102939 ~ 14196546 (+)
LOC111192957 NA coding downstream 678230 14721032 ~ 14727355 (+)
fam200b NA coding downstream 954316 14997118 ~ 15000582 (+)
G63827 NA non-coding upstream 259746 13754865 ~ 13755370 (+)
G63813 NA non-coding upstream 301676 13711909 ~ 13713440 (+)
G63791 NA non-coding upstream 337857 13573720 ~ 13677259 (+)
G63755 NA non-coding upstream 471605 13542613 ~ 13543511 (+)
G63756 NA non-coding upstream 473115 13541161 ~ 13542001 (+)
G63978 NA non-coding downstream 340080 14382882 ~ 14383150 (+)
G63979 NA non-coding downstream 390169 14432971 ~ 14433787 (+)
G63992 NA non-coding downstream 431224 14474026 ~ 14474399 (+)
G64001 NA non-coding downstream 625314 14668116 ~ 14731918 (+)
G64022 NA non-coding downstream 742107 14784909 ~ 14859165 (+)
LOC111192955 NA other upstream 853749 13156226 ~ 13161367 (+)
G63432 NA other upstream 1546214 12468050 ~ 12468902 (+)
G63051 NA other upstream 4365029 9646579 ~ 9650087 (+)
LOC111192948 NA other upstream 4574552 9431499 ~ 9440564 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other upstream 5474993 8526218 ~ 8540123 (+)
gata3 gata3,LOC107555822 other downstream 124427 14167229 ~ 14242234 (+)
G64015 NA other downstream 701933 14744735 ~ 14745082 (+)
arid2 arid2,LOC107707985,LOC107555896 other downstream 2352524 16395326 ~ 16426623 (+)
G64289 NA other downstream 2396418 16439220 ~ 16442449 (+)
G64431 NA other downstream 2710241 16753043 ~ 16753560 (+)

Expression


Co-expression Network