LOC103039070


Basic Information

Item Value
gene id LOC103039070
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 16895580 ~ 16945665 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671410.1
GGGAGATCCGGGGATCTGATCCGGATTATTCTGGTCTGAATGATCCAGCTGGTTTTGTCTGTGGTTCGGTTTTGTTGTGTGAGCTGCTGTGGTTGTAAATCAGgggaaatggttaaaaacagaTCCTGGACCTGCTGATGGAGATGTGAAGGAGGATTACACAAATAAACCGGATTAAATCGGTGAAGCGGAGCCGCGGAACGgtTCCCAGGAACCATGAGGCATGCCGCGCCGCTGTGGCCCAGTGCGGACACAGTTGCAGGGGAAGATTGAACGCTGCTGAAGTCTCAAGGCTCTGAGCCTTCTGGAGTACTGCCATGACCAGTCAGGGTGGTGGCAATGGGGACACGCCCGGTCCCCCGCCGTCCTCGTCTTCGCCTTCGGCTTCATCTTCGTTCCTCAGGCCGTCCGCTGGCCCGAAGCTGCAAGTTCAGCGCTCGCTGTCTCGCGACACGATCACCATCCACTTCTCCGCTCAGGGTAAggatgaggaagaagaagatgaagaactGTACGGGCTGGCTGCCACCACGTCCGGACCGGATGGAGACGAGCAGGGCGTAGCGACAGCTGTGGAAGCCAGTGAGGAGTTACTGTTCGAGGGGGCAGGGACGGGGACAGGTCCAGGAGGTCTCCCTGTTTCGTCTACTGTGGCGTCGTCATCCCCAGCCCTTTCCATCCAGCCGTTACCATCCACCACATCGTCCATCGTTTGTAGCCCTGCCAGCTCCTCTTGGCCCTCAACCCAACCTCTCGCTTCTACAACCTCCTCCACCTCTTCCTACACCACCGGTTCTCCAGCCACCAGGTCCTCAAAACCATTCCTCAGCCTGGTCAAGTCTTTATCTACTGACGTAGAGCCTCGCGAAAGCACCACGCCAGTTCCTGTTCCTGCTCCTGCTTCTGCTCCTCAACCCAAGCGCCATCGCCACTTGATGAAGACCCTGGTCAAGTCTTTGTCCACCGACACAGCTCATCCGGAACAAGAATCGCCATCCCATCGCCAGACGGATTCTCGCCTCAACTTGCACCTTTTTAAGCCTTTCGCCCAACAGAGGGTCACCGTACCGCCTGGCGGCGACTCCAAGACGGCACCATCCTCGCCCATAACCTCACCCGATGGGCGCACCTTCTTCAAAGTCCAAGAAGTTGAGGCGCGAATCGAGGACACCAAGCGGCGTCTCTCAGAGGTCATGTGCGAACCTCTTCAATTGCTCAGCAAGATCATTGGCGAAGAAGGGGGGAGTACCACTAGCGCCGTCGCCGCCACAGCCATTGGTGGTGGTGCCACAGTGCCAGGGCAAGGGAGCAGCCATCGACCCAAAAGCCTCTCCACTAGTGCCACAGAGCTTTCCACTCTGACCACCCTCAATGGCCACCTGGAAAGCAACAGCGACTACTGCATCAAAGAGGAAGAAGACCTCGAGGGCGAGAGTCCTCTAGAAGGTACCCTACCCAGGTCACCATCGCTAGGTCTGGACAGGTGCTTCATGTCTGCTCTGGCCCGGCAGGAAGACGAGGAGTTTTGCGAACTTTACAGCGAAGATTTCGAGCTCTGCACGGACACCGAAGCTGACGGGGAACTTGCAGACTCCACCAGGCTCCAGCGAGGGAGCACGGCGTGCAGCGAGGAAGCAACCGAGGGCGAGGAAGAcggtgaagaagaagaagaggaagatgaCGATTATGATAAGTCTACGGGAGTACCGCAAAACGGACTCATTCTCCTCGTTTCCATCGTGTACGGCTACTTCGTGCTGCCGCTGCCCACGTACGTAGGGGGGGTGTTGCTGGGAGTCGCCGCTGGCTTCATGCTAGCGATTTTGGTGTTGTGGCTCTCGGCCCCGCGCCGGGTCCCGGCCTGGGGCCCTACTTGCTTTAGCCGGTCCAGGAGAGAGCGCTGGAGTGGGGTCCCTTTGGACATCAAGGAGCCGAGCATCTACAAGggttGGATGAATGAGATCCACAGCTATGACCCGGAGTCGTATCACGCCACACTCACCCACTCAGTGTACGTACGCCTGGAGGGCTCCGTGCTCCGCCTCTCCAAACCCAACCGCAACATCCCCCGCCGGGCCAGCTTCAGCGAGCCCAAACCCGACGTCACCTACATCAGCCAGAAGATCTACGACCTGACCAGCAGCAAGATCTACCTGGTTCCCCACAGTCTGGCGAGGAAGCGAGTGTGGAATAAGAAATACCCAATCTGCATCGAGCTGGCCAAGCAGGACGACTTCATGTCCAAAGCCCAGGGGGAGCGTCCCGACCCCGCGGAGGAGAAGACTCCCGCCCCGGTGGAGAAGAGCGAGGGGACAGCGGGAACCGAGGACAACAGGAGACCGTCCTCAGACCCTGTCCTGTTCCTGTTCGGGAGGACGGGCCGGGAGAAGGAGGAGTGGTTCAGACGAATGCTTCTCGCCTCCAGACTCAAAGCTGAGATTAAAAAACCTCCAGGCCTTCCCTCACCTTTTGTCCCCTCCCACGGGcgcagcagcagccaatcaggcgCTCTCTCTCACAGTCGCAGCAGCAGCCGGGGCAGCCTGGACGACCTGCTGCAGTCTCAGTCTCAGACCCGGCAGAAAGACCCGGGGGGCGGAGCCAAACAGAAAGTTCTGGACTACAACGTCTACATGGCCAAATACATCAGCCAATCATCAGGGAGCCCTACTGCCAGCCCCGCCCACAGCACGGACAGCAGCCCGCGGACCGTCAAGAAGTTTCCGCATGGTCTGAGTTCAGAGGCCGGGTCTGAGGCCTGGGTTAATGCTCTGCTGGGTCGTATCTTCTGGGACTTCCTCAGGGAGAAGTACTGGGCTGATGTTGTgtccaaaaaaatccagatgAAGCTGAGCAAGATCCGGCTGCCGTACTTCATGAACGAGCTCACGCTGACTGAGCTGGACATGGGCATGGCTATACCCAAGATCCTGAGATCCTCCAAGCCTTCAGTCGACCATCAGGGTCTGTGGTTTGATCTGGAGATCTCCTATAACGGATCTTTTCTGATGACTCTGGAGACGAAGATGAACCTCGCTCGGCTCGGGAAGGAGGGAGAGGGTTTAGGAGAGCAGGGAAAAGAGGGGCCGCGCACGTACTGCCTGGCTGACAGTGATGAGGAGTCGTCCAGTGCTGGATCTTCTGATGAAGAGGATCCAGCAGAAGATCCTGAGATATCAGGAGTGGAGGGCTACGTCGGGGGACATCGTCCCAGCAAGATCATGCGCTTCGTGGACAAGATCGCCAAGTCCAAGTACTTCCAGAAGGCCACGGAGACGGAGttcatcaagaagaagatggaggaGGTGTCCAACACCCCCCTGCTCCTGACGGTGGAGGTGCAGGAGTGCCGGGGGACGCTGGCCGTCAACATCCCGCCGCCCCCTACAGACAGGATATGGTATGGATTCAGAAGTCCACCACACCTGGAGCTGAAGGCCCGACCCAAACTCGGGGAGAGGGAGGTCACGCTCGCCCACGTGACCGACTGGATCGAGAAAAAACTGGATCAGGAGTTTCAGaaaatatttgTTATGCCAAACATGGACGACGTATGGCTTCCCATCATGCACTCTGCCATGGACACGCGGTCCAACCTGAACTTGGTTACTGTGATTTCTGATGCTGTGAAATCTGAGGCGACCCTGGACCTGGAGGATCCTGCAGAAGAGCTGTGAACCTGCTGGAAAACTGCAGAAAACCTGAGGAATGTGTTGGATACTGGTGGTGCCTGCTGGGTAATGGGGAGGGTAATCATCCTCACTGTTTACTCAAGTGGTTTTAAGCTCGTTTGGGTctaaatgcatattaataatgcatttattacagGAAGAAGCTGGAAATGAACACTTTTATATTGGTTTTGGTGTAATGTGAAGTATCGTACAGCAGGGGAATGGATGGATCCATGGAAGAACGTATAAAAGCAGCGTATAGAACCAATCACCTGTATGCTATACGCGACGCCTCACTGCTCCAGCGCTTTTACCTCTCATTTCCAGGTGGGTTTAGGCGCCATCTTGGCCTCCATGGCATCAACCCGGGAGCGAATGAACTTAATCCAGGATAAAGAGTCTGAATTCAGTGCCCTGCAGCACAGCGATCTCTGAATAATGTAAACTAAACGATGGATGAATGAATTTTTAATTCAGATTGTAAAGCGATTCGGGAGATTATCAGATTTGTGTGCCATGCTGATCCTCATCTGCTTTTCGCAtcggaaaaaaatgtgatttacagCATCAATAACCAATAAAACCAACATCAACATCAACATACGTATAGAAAAGAAAGTACCTGCCGCCACCGACCTCTGCCAATCACATTGCTGCCTGAGGAGGCATCTACAGCGGTGCGTAAGAGTTTTTGGAGAAAAATGactaattttctatatttctgtgtaaaatTTGATCATTggacatttttcacaaaaacgtAGAACTAGAAAGAAGAACCAGTGGAATCAaacaaatgaaattaattaataatatattatttagactcattttttaagtgagaaaaattatatacagctctggggaaa
>XM_022671411.1
ccatccatccatccacccttccttccatccctccatccctgcATCCCTCCGCCGCCCCGCTCCTTTATACCGGAGCTCTGTGTGAAGCTGCGAGTGTGTGGTGAGgctggtgtgggtTCCCAGGAACCATGAGGCATGCCGCGCCGCTGTGGCCCAGTGCGGACACAGTTGCAGGGGAAGATTGAACGCTGCTGAAGTCTCAAGGCTCTGAGCCTTCTGGAGTACTGCCATGACCAGTCAGGGTGGTGGCAATGGGGACACGCCCGGTCCCCCGCCGTCCTCGTCTTCGCCTTCGGCTTCATCTTCGTTCCTCAGGCCGTCCGCTGGCCCGAAGCTGCAAGTTCAGCGCTCGCTGTCTCGCGACACGATCACCATCCACTTCTCCGCTCAGGGTAAggatgaggaagaagaagatgaagaactGTACGGGCTGGCTGCCACCACGTCCGGACCGGATGGAGACGAGCAGGGCGTAGCGACAGCTGTGGAAGCCAGTGAGGAGTTACTGTTCGAGGGGGCAGGGACGGGGACAGGTCCAGGAGGTCTCCCTGTTTCGTCTACTGTGGCGTCGTCATCCCCAGCCCTTTCCATCCAGCCGTTACCATCCACCACATCGTCCATCGTTTGTAGCCCTGCCAGCTCCTCTTGGCCCTCAACCCAACCTCTCGCTTCTACAACCTCCTCCACCTCTTCCTACACCACCGGTTCTCCAGCCACCAGGTCCTCAAAACCATTCCTCAGCCTGGTCAAGTCTTTATCTACTGACGTAGAGCCTCGCGAAAGCACCACGCCAGTTCCTGTTCCTGCTCCTGCTTCTGCTCCTCAACCCAAGCGCCATCGCCACTTGATGAAGACCCTGGTCAAGTCTTTGTCCACCGACACAGCTCATCCGGAACAAGAATCGCCATCCCATCGCCAGACGGATTCTCGCCTCAACTTGCACCTTTTTAAGCCTTTCGCCCAACAGAGGGTCACCGTACCGCCTGGCGGCGACTCCAAGACGGCACCATCCTCGCCCATAACCTCACCCGATGGGCGCACCTTCTTCAAAGTCCAAGAAGTTGAGGCGCGAATCGAGGACACCAAGCGGCGTCTCTCAGAGGTCATGTGCGAACCTCTTCAATTGCTCAGCAAGATCATTGGCGAAGAAGGGGGGAGTACCACTAGCGCCGTCGCCGCCACAGCCATTGGTGGTGGTGCCACAGTGCCAGGGCAAGGGAGCAGCCATCGACCCAAAAGCCTCTCCACTAGTGCCACAGAGCTTTCCACTCTGACCACCCTCAATGGCCACCTGGAAAGCAACAGCGACTACTGCATCAAAGAGGAAGAAGACCTCGAGGGCGAGAGTCCTCTAGAAGGTACCCTACCCAGGTCACCATCGCTAGGTCTGGACAGGTGCTTCATGTCTGCTCTGGCCCGGCAGGAAGACGAGGAGTTTTGCGAACTTTACAGCGAAGATTTCGAGCTCTGCACGGACACCGAAGCTGACGGGGAACTTGCAGACTCCACCAGGCTCCAGCGAGGGAGCACGGCGTGCAGCGAGGAAGCAACCGAGGGCGAGGAAGAcggtgaagaagaagaagaggaagatgaCGATTATGATAAGTCTACGGGAGTACCGCAAAACGGACTCATTCTCCTCGTTTCCATCGTGTACGGCTACTTCGTGCTGCCGCTGCCCACGTACGTAGGGGGGGTGTTGCTGGGAGTCGCCGCTGGCTTCATGCTAGCGATTTTGGTGTTGTGGCTCTCGGCCCCGCGCCGGGTCCCGGCCTGGGGCCCTACTTGCTTTAGCCGGTCCAGGAGAGAGCGCTGGAGTGGGGTCCCTTTGGACATCAAGGAGCCGAGCATCTACAAGggttGGATGAATGAGATCCACAGCTATGACCCGGAGTCGTATCACGCCACACTCACCCACTCAGTGTACGTACGCCTGGAGGGCTCCGTGCTCCGCCTCTCCAAACCCAACCGCAACATCCCCCGCCGGGCCAGCTTCAGCGAGCCCAAACCCGACGTCACCTACATCAGCCAGAAGATCTACGACCTGACCAGCAGCAAGATCTACCTGGTTCCCCACAGTCTGGCGAGGAAGCGAGTGTGGAATAAGAAATACCCAATCTGCATCGAGCTGGCCAAGCAGGACGACTTCATGTCCAAAGCCCAGGGGGAGCGTCCCGACCCCGCGGAGGAGAAGACTCCCGCCCCGGTGGAGAAGAGCGAGGGGACAGCGGGAACCGAGGACAACAGGAGACCGTCCTCAGACCCTGTCCTGTTCCTGTTCGGGAGGACGGGCCGGGAGAAGGAGGAGTGGTTCAGACGAATGCTTCTCGCCTCCAGACTCAAAGCTGAGATTAAAAAACCTCCAGGCCTTCCCTCACCTTTTGTCCCCTCCCACGGGcgcagcagcagccaatcaggcgCTCTCTCTCACAGTCGCAGCAGCAGCCGGGGCAGCCTGGACGACCTGCTGCAGTCTCAGTCTCAGACCCGGCAGAAAGACCCGGGGGGCGGAGCCAAACAGAAAGTTCTGGACTACAACGTCTACATGGCCAAATACATCAGCCAATCATCAGGGAGCCCTACTGCCAGCCCCGCCCACAGCACGGACAGCAGCCCGCGGACCGTCAAGAAGTTTCCGCATGGTCTGAGTTCAGAGGCCGGGTCTGAGGCCTGGGTTAATGCTCTGCTGGGTCGTATCTTCTGGGACTTCCTCAGGGAGAAGTACTGGGCTGATGTTGTgtccaaaaaaatccagatgAAGCTGAGCAAGATCCGGCTGCCGTACTTCATGAACGAGCTCACGCTGACTGAGCTGGACATGGGCATGGCTATACCCAAGATCCTGAGATCCTCCAAGCCTTCAGTCGACCATCAGGGTCTGTGGTTTGATCTGGAGATCTCCTATAACGGATCTTTTCTGATGACTCTGGAGACGAAGATGAACCTCGCTCGGCTCGGGAAGGAGGGAGAGGGTTTAGGAGAGCAGGGAAAAGAGGGGCCGCGCACGTACTGCCTGGCTGACAGTGATGAGGAGTCGTCCAGTGCTGGATCTTCTGATGAAGAGGATCCAGCAGAAGATCCTGAGATATCAGGAGTGGAGGGCTACGTCGGGGGACATCGTCCCAGCAAGATCATGCGCTTCGTGGACAAGATCGCCAAGTCCAAGTACTTCCAGAAGGCCACGGAGACGGAGttcatcaagaagaagatggaggaGGTGTCCAACACCCCCCTGCTCCTGACGGTGGAGGTGCAGGAGTGCCGGGGGACGCTGGCCGTCAACATCCCGCCGCCCCCTACAGACAGGATATGGTATGGATTCAGAAGTCCACCACACCTGGAGCTGAAGGCCCGACCCAAACTCGGGGAGAGGGAGGTCACGCTCGCCCACGTGACCGACTGGATCGAGAAAAAACTGGATCAGGAGTTTCAGaaaatatttgTTATGCCAAACATGGACGACGTATGGCTTCCCATCATGCACTCTGCCATGGACACGCGGTCCAACCTGAACTTGGTTACTGTGATTTCTGATGCTGTGAAATCTGAGGCGACCCTGGACCTGGAGGATCCTGCAGAAGAGCTGTGAACCTGCTGGAAAACTGCAGAAAACCTGAGGAATGTGTTGGATACTGGTGGTGCCTGCTGGGTAATGGGGAGGGTAATCATCCTCACTGTTTACTCAAGTGGTTTTAAGCTCGTTTGGGTctaaatgcatattaataatgcatttattacagGAAGAAGCTGGAAATGAACACTTTTATATTGGTTTTGGTGTAATGTGAAGTATCGTACAGCAGGGGAATGGATGGATCCATGGAAGAACGTATAAAAGCAGCGTATAGAACCAATCACCTGTATGCTATACGCGACGCCTCACTGCTCCAGCGCTTTTACCTCTCATTTCCAGGTGGGTTTAGGCGCCATCTTGGCCTCCATGGCATCAACCCGGGAGCGAATGAACTTAATCCAGGATAAAGAGTCTGAATTCAGTGCCCTGCAGCACAGCGATCTCTGAATAATGTAAACTAAACGATGGATGAATGAATTTTTAATTCAGATTGTAAAGCGATTCGGGAGATTATCAGATTTGTGTGCCATGCTGATCCTCATCTGCTTTTCGCAtcggaaaaaaatgtgatttacagCATCAATAACCAATAAAACCAACATCAACATCAACATACGTATAGAAAAGAAAGTACCTGCCGCCACCGACCTCTGCCAATCACATTGCTGCCTGAGGAGGCATCTACAGCGGTGCGTAAGAGTTTTTGGAGAAAAATGactaattttctatatttctgtgtaaaatTTGATCATTggacatttttcacaaaaacgtAGAACTAGAAAGAAGAACCAGTGGAATCAaacaaatgaaattaattaataatatattatttagactcattttttaagtgagaaaaattatatacagctctggggaaa

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671410.1 True 4543 mRNA 0.54 13 16895580 16945665
XM_022671411.1 False 4455 mRNA 0.55 13 16895580 16945445

Neighbor

gene id symbol gene type direction distance location
LOC111192875 LOC108437882 coding downstream 188505 16696081 ~ 16707075 (-)
LOC103027149 LOC103027149 coding downstream 235073 16654113 ~ 16660507 (-)
LOC103027662 LOC108411501,LOC108275084,LOC107658982 coding downstream 317764 16529205 ~ 16577816 (-)
slc38a2 slc38a2,s38a2,LOC103028401,LOC106609517,LOC108274720 coding downstream 426223 16459740 ~ 16469357 (-)
scaf11 NA coding downstream 444814 16431300 ~ 16450766 (-)
LOC103042974 LOC108437161 coding upstream 99849 17045514 ~ 17096825 (-)
cep112 cep112 coding upstream 157630 17103295 ~ 17307076 (-)
stk19 stk19,LOC106601743,LOC106601674 coding upstream 775464 17721129 ~ 17731699 (-)
LOC111192974 tvp23b,LOC108437154,LOC105899270 coding upstream 837087 17782752 ~ 17797809 (-)
LOC111192966 NA coding upstream 861409 17807074 ~ 17817082 (-)
G64491 NA non-coding downstream 3115 16877616 ~ 16892465 (-)
G64485 NA non-coding downstream 4797 16804561 ~ 16890783 (-)
G64479 NA non-coding downstream 129318 16763210 ~ 16766262 (-)
LOC111192962 NA non-coding downstream 181531 16712073 ~ 16714049 (-)
G64422 NA non-coding downstream 228341 16665021 ~ 16667239 (-)
G64508 NA non-coding upstream 2924 16948589 ~ 16948788 (-)
G64510 NA non-coding upstream 6923 16952588 ~ 16952870 (-)
LOC111192963 NA non-coding upstream 94177 17039842 ~ 17042071 (-)
G64619 NA non-coding upstream 199613 17145278 ~ 17145667 (-)
G64622 NA non-coding upstream 209941 17155606 ~ 17156047 (-)
G64492 NA other downstream 7677 16882335 ~ 16887903 (-)
G64387 NA other downstream 309933 16585065 ~ 16585647 (-)
LOC103027187 NA other downstream 1027785 15671306 ~ 15867795 (-)
G64060 NA other downstream 1900748 14994164 ~ 14994832 (-)
LOC111192906 NA other downstream 1902850 14990229 ~ 14992730 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other upstream 589631 17535296 ~ 17664561 (-)
LOC103043390 NA other upstream 733149 17678814 ~ 17689312 (-)
G64886 NA other upstream 982842 17928507 ~ 17931170 (-)
LOC111192976 NA other upstream 1679210 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other upstream 1692642 18638307 ~ 18650343 (-)

Expression


Co-expression Network