XLOC_000746



Basic Information


Item Value
gene id XLOC_000746
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 55385192 ~ 55385451 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00002884
CCTGCAGGTGGAGACACAACAGATTGTTAAAGAGGGAGACTCAGTGACTCTGAGCTGTAAAAGCAGCTGCTCTCTGCCTGAAGAAACTACATTCATCTGGTACAGAAACACAGAGAGATTAAATAAAGGAATCAGAACAGAGAATCAGCTTCATCTGCAGTCAGTCAGCTATTATGATGCTGGATATTATCAGTGTGCTGTAGGAGGAAATGAACATCTGATCTCTCCTGCTGTTTATGTCAAAGTAGGATGTGAGTATA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00002884 True 260 lncRNA 0.42 1 55385192 55385451

Neighbor


gene id symbol gene type direction distance location
XLOC_000744 NA coding upstream 15353 55369517 ~ 55369839 (+)
XLOC_000743 si:ch211-286b5.9 coding upstream 31214 55348537 ~ 55353978 (+)
XLOC_000742 NA coding upstream 41341 55326566 ~ 55343851 (+)
XLOC_000740 si:ch211-286b5.8 coding upstream 74489 55304374 ~ 55310703 (+)
XLOC_000739 zgc:172106 coding upstream 86019 55293424 ~ 55299173 (+)
XLOC_000747 NA coding downstream 6929 55392380 ~ 55393032 (+)
XLOC_000748 NA coding downstream 52121 55437572 ~ 55439275 (+)
XLOC_000749 CR788255.1 coding downstream 67441 55452892 ~ 55453752 (+)
XLOC_000750 adgre9 coding downstream 93202 55478653 ~ 55515184 (+)
XLOC_000751 adgre16 coding downstream 150376 55535827 ~ 55540577 (+)
XLOC_000735 NA non-coding upstream 193930 55184764 ~ 55191262 (+)
XLOC_000733 CU467849.1 non-coding upstream 256613 55128465 ~ 55128579 (+)
XLOC_000729 NA non-coding upstream 399895 54959492 ~ 54985297 (+)
XLOC_000758 NA non-coding downstream 293461 55678912 ~ 55679447 (+)
XLOC_000760 NA non-coding downstream 329467 55714918 ~ 55729126 (+)
XLOC_000761 NA non-coding downstream 332127 55717578 ~ 55721415 (+)

Expression



Co-expression Network