hid1 (hid1,LOC107710705,LOC107698779)


Basic Information

Item Value
gene id hid1
gene name hid1,LOC107710705,LOC107698779
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17884620 ~ 17920811 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671454.1
ggcggcagtaacagtaacagcgcggggaggaggaggaggattagTGAAGGATCTCCTCATAATAAAACACACGGGCTGAAAACATGGGAAACACCGACTCCAAACTCAAATTCAGGAAAGCGGTCATTCAGCTCACCACTAAAACCCAGCCTGTTGAAGCTACAGACGATGCGTTCTGGGATCAGTTCTGGGCCGACACCGCCACCACCGTACAGGACACCTTCGCTCTGGTTCCGGCTGCTGAGATCCGGGCTGTGAGGGAGGAATCCCCctccaatctggcaaccctgtgcTATAAgGCGGTGGAGAAGTTGGTGCAGGCGGCGGAGTCGGGATGCCCcagtgaaagagaaaaacaggtggTTCTGAACTGCACCCGCATCCTCACCCGCATCCTGCCCTACATCTTCGAGGACCAGGACTGGAGGGGCTTCTTCTGGTCCACCGTGCCCGGCGCCGGCCGAGCCGGGATGGATgagatggatgatgatgatgaaggagCTCGGCCGCTGGCGGAGTCACTACTGCTGGCCATTGCTGACCTGCTGTTCTGCCCGGATTTCACCGTTCAGAGCCACCGGAGGGGCGGCCCGGAGTCGGTGGAGGACATGCAGTCTCTGGACAGCTGTGAATACATCTGGGAGGCGGGGGTGGGTTTCGCTCAGTCCCCCCCACTCAACTACATTCACGACCTGAACAGGACGGAGTTGCTGAGGCTGCTGTTGACCTGTTTCTCAGAGGCCATGTACCTGCCTCCATCACCTGATGGAAACATCCTCAACCCCTGGGTCACCTTCTTCTGCTCTACAGAGAAcagGCATGCCCTACCTTTGTTTACCTCTCTGATTAACGTGGTGTGTGCGTATGACCCGGTGGGTTACGGCATTCCTTACAACCACCTGCTGTTCTCCGACTAccgcgagcagctggtggagcaggCGGTGCAGATCCTCATCGTCACCCTGGAGCACGAGGGCAACCAGCCCCACCGCGCTCCCTCCCCCTCCAGCATGGACGAGCAGGATTCTGCTGGTCCGGATAACCTGTTTGTGAACTACCTGTCGAGAATTCACAGGGAGGAGGATTATGACTTTGTGCTGAAAGGTCTGGCCCGCCTGCTGACCAATCCGCTCACTCAGACCTACCTGCCCAACTCCACCAAAAAGATCCAGTTCCAccaggagctgctggtgctcttCTGGAAGCTCTGTGACTTTAACAAAAAATTCCTTTTCTTCGTGTTGAAGAGCAGTGATGTGCTGGATGTACTGGTGCCCATTCTCTACTACCTGAATGATGCCAGGGCTGACCAGTCTCGTGTTGGTCTGATGCACATCGGTGTGTttattctgctgctgctgagcgGAGAGAGGAACTTCGGGGTGCGTCTGAATAAACCCTTCTCTCTACACGTCCCTATGGACATCCCAGTGTTCACCGGCACGCATGCCGACCTCCTGATTGTGGTCTTCCACAAGATCATCACGAGTGGCCACCAGCGTCTGCAGCCGCTCTACGACTGCCTGCTCACCATCGTAGTGAATGTGTCCCCCTACCTGAAGAGTCTGTCCATGGTGGCGGCTAATAAACTCTTGCACCTTCTGGAAGCTTTTTCTACCAACTGGTTCCTGTTCTCCGCTGCTCAGAACCACCATCTGGTCTTCTTCCTGCTGGAGGCCTTTAATAACATTATCCAGTACCAGTTTGATGGTAACTGTAACCTGGTGTACGCCATCATCCGGAAGCGCAGCGTCTTCCATCAGCTGGCGAACCTGCCCACCGACCCAGCGTCCATCcagaaagctctgcagaggAAGAAGAAATCTCCAGACGCCATCTCTCGCACCAACTCCCTGGAGACCGTCTCCATGGAGGGATCTCGACCCGCTGTACCTGCAGAGCCCGGCACCTTGAAGGCCAGCCTTGTTGCTATACCAGGTATTGATAAGTTAACGGAGAAGTCTCAGGTGTCAGAAGATGGTACCATGGTCGCCGTGGCGCAGACAGAGACGCAGCGCTCACCAGAACACAGCGGGCTGGCCGGGGCCAGCGACACCGAGTCCAACTCAGGAAGAGACACTGAGGTGAGAGGAGTGATCTGAGACTGCATTTatacagataaacatgaacaggaagcagttgtttttttattcaggttttttttaCCTACAATATGCTTAGAATCAgttctgtcCTGGAAGAGCAAGCTCCCTCTCCAGACCATCATGAGGCTTCTGCAGGTTCTGGTGCCCCAAGTGGAGAAGATCTGCATTgacaaGGGATTAACGGACGAGTCTGAGATCCTGAAGTTCCTGCAGCACGGAACGCTGGTGGGGCTGCTTCCTGTTCCGCATCCCATCCTAATCCGGAAGTACCAGGCCAACGCCGGCACCGCCATGTGGTTCCGCACCTACATGTGGGGCGTGGTGTACCTGCGTAACGTGGATCCGCCGATCTGGTACGACACAGACGTCCGTCTCTTCGAGATCCAGAGGATgtgaagtgggcggggcttcagCTGCCTGTCGCCGACTAAAGGAGGGGCTAATCTATGATGTCAGTTCAGCATTTTTGGCCCCTCCCACTTTGGCTCCCATTTAAAGCTTACAGTCTTCAACCTGCCAATCACAGTGCTGTAATCCATCCTGCCCCTCCCCCGTCTCACTGGAACCCTGGGTAAAGgatggttaatttttttttttttagtttttatttgttttttgtttttgtggaaAGGATTTATTGACTtggatatatatgtatatattaaaatataaatatatatatatatctatatcagTGGGCGTGGCTCACTGTGTTGTTGTGAAGGTTGTTGTAGAAAATGATGaatgacatatatata

Function

symbol description
hid1 Located in Golgi cisterna; cytoplasmic microtubule; and cytosol. Is extrinsic component of Golgi membrane.

NR:

description
PREDICTED: protein HID1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671454.1 True 2863 mRNA 0.53 19 17884620 17920811

Neighbor

gene id symbol gene type direction distance location
ush1g ush1g,ush1ga,LOC107556601,LOC107698769,LOC107568596 coding downstream 29458 17840179 ~ 17855162 (-)
LOC111192966 NA coding downstream 67538 17807074 ~ 17817082 (-)
LOC111192974 tvp23b,LOC108437154,LOC105899270 coding downstream 86811 17782752 ~ 17797809 (-)
stk19 stk19,LOC106601743,LOC106601674 coding downstream 152921 17721129 ~ 17731699 (-)
cep112 cep112 coding downstream 577544 17103295 ~ 17307076 (-)
LOC103047157 socs3,LOC103047157,LOC107552116,LOC107671257,LOC107698761 coding upstream 432522 18353333 ~ 18356495 (-)
LOC103034879 usp36,LOC107717487 coding upstream 568841 18489652 ~ 18536743 (-)
LOC103028836 NA coding upstream 618092 18538903 ~ 18550973 (-)
LOC103028209 NA coding upstream 646866 18567677 ~ 18575169 (-)
tspan10 NA coding upstream 665758 18586569 ~ 18590070 (-)
G64882 NA non-coding downstream 2200 17880450 ~ 17882420 (-)
G64857 NA non-coding downstream 68892 17769247 ~ 17815728 (-)
G64835 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 non-coding downstream 164709 17690229 ~ 17719911 (-)
G64841 rac1b,rac1,LOC103481976,LOC106531821,LOC102217008,LOC105935606 non-coding downstream 169178 17707996 ~ 17715442 (-)
G64692 NA non-coding downstream 205955 17677102 ~ 17678665 (-)
G64898 NA non-coding upstream 56736 17977547 ~ 17978089 (-)
G64902 NA non-coding upstream 78745 17999556 ~ 17999808 (-)
G64904 NA non-coding upstream 103263 18024074 ~ 18024657 (-)
G64926 NA non-coding upstream 251721 18172532 ~ 18173990 (-)
G64936 NA non-coding upstream 278252 18199063 ~ 18230483 (-)
LOC103043390 NA other downstream 195308 17678814 ~ 17689312 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other downstream 220059 17535296 ~ 17664561 (-)
G64492 NA other downstream 996717 16882335 ~ 16887903 (-)
G64387 NA other downstream 1298973 16585065 ~ 16585647 (-)
LOC103027187 NA other downstream 2016825 15671306 ~ 15867795 (-)
G64886 NA other upstream 7696 17928507 ~ 17931170 (-)
LOC111192976 NA other upstream 704064 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other upstream 717496 18638307 ~ 18650343 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other upstream 977374 18898185 ~ 19023658 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other upstream 1359491 19280302 ~ 19284032 (-)

Expression


Co-expression Network