rpap3 (rpap3)


Basic Information

Item Value
gene id rpap3
gene name rpap3
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 24367492 ~ 24383022 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671556.1
ATGAATATCTCTGTTCGGGTTTATTCGCAAAGGCTGCTGGTAGTTGGCTGTCATGGCGCTGAACCCAAACAGACAAGATCAGCGTGCGTTCTGCTGAGTAACGAGactgaaaaaaacactgcagcatGTCGGGGGGCAATAAAGCCATTGAGCTGCAGATGCAGATGCGTCAGAATTCGGAGGATCTCCAGAACTTCATGAGGGAGCTTGAAACCTGGGAGGTcgacataaaaaagaaagatgaagAGCTTCGCACAGGAAGTGTAACAGAATCACAGAAAACTCTTCCACCTGTGAGAAACAAAGATTACAAGAAGAAACGACGCGTCAAAGGTAAAGTTCCTGACAAGAACAGCCAAGAAGAGCAGAAGCCAGTACAGAGAATAAAATCATATGATTATCAGTCATGGGAAAAGTTTGATGTGGATAAAGCTCTTGAGACAGTGGACAAAGAAGAGAGCCCAGAATCGAATGACTCTGACTCGGAGGAGGTGCAGGTGGACAGAGACCTGGCaatgaaagagaaggagaaaGGCAACCAGTTCTTTAAAGACGGAAAGTATGACGAGGCCATTGAATGCTACACCAGAGGAATGAGTGCTGACCCATACAATCCTGTTCTGCCGACAAACCGAGCAGCATCTTTCTTCagacttaaaaaGTATGCTGTTGCAGAGTCCGACTGTAACCTGGCTATAGCGCTGGACAGCAAGTACATTAAAGCCTATGCCAGAAGAGGGGCTGCACGTTTTGCTCATAATAACCATCAGGGTGCTTTAGAAGATTACGAAATGGTTTTGAAGTTGGACCCTGAAAACCTAGATGCTCAGAATGAGATCAAGAAGCTAAGCCAGGCTTTAGCTTCtcaaaaacagagagaagatAAGGTAGAGAAGACTTTGGTTGAAGTGCTGCCTGCTGAGGAAGCAAAGCCTAAACACATAGAAGAGGAGCAGCAGAGAAGACAGGAGGCAGTGGTGCAGAAGGACCGGGGTAATGCTTACTTCAAGGAGGGAAAGTATGAGGCAGCTGTGGAGAGCTACACCAAAGGCATGGAGGCAGATGCCACAAATGCTTTACTCGCTGCTAACAGAGCTATGGCTTACCTCAAACTTGAAAGGTATGCTGAAGCAGAAGAGGACTGCAGTAAGGCCATTGCTCTGGACAGCACCTACTTAAAGGCTTTCGCCCGACGTGGCACAGCTAGAGCTGCTCTGGGCCATCTTACTGAAGCCAAGGAAGatTTCGAGCAGGTTCTGAGGCTTGAACCGGGAAACAAACAGGCAATGAATGAGCTGAAAAAACTGAATATGGAGATGACTTCTAGTGGGCTACAGCCGGCAGAAGGAACTCAAAGAAGAACAGTTCAACCGGTCAATAAACCAGAACATCTCAGATCTACGaagccaatgaaaagaATGGAAATTGAAGAAGTTGGTGGAGAGCTGACAGACGTAATGCAGCCTCAGAGATCGACCGCTGCTGGAAACTCCTCAAGACCTGGACCAGTGCCAAGTGTGACTGCTTCTTTCTCAGAGAGAGAAATGCAAGGTGAAGCTTCTCCACTCTCATGTTCCCCCTCTGCCAAGATCCTGAAAATCGAGGAGCTGTCAGACACTCCTTCACAACCTCCAACCAAATTCCCTCAGAAAAAGACAGCACTGCATAAAGAGGAAAAAGCCACCGGAAGTATGGAGCAAACCTCATCCCTATCCTCTACTTCAGTCCAATCCGAGGTCATTCCTCCACCCCCCACAAACGGCTTCCAGCTAGAAGCAGACTTGAGGAAGATTGGTGATCATCTTGAAGTCAGCTACAGATATTTAAAGCAAATTCACCCTGAAGCCTACGAGAAGATTTTTCAAAACTCTCTGGAGCCTGACATCCTTAATAAGATTTTGAAAGTACTTCAGAGCTTTTACGTCAAgAATGAGGAGCCATCAATCATACTGGCAGTCCTGAAAAGCTTGTCAAAAGTGAGAAGGTTTGAGATGACTGTTATGTTCATGTCTTCTGCTGAAAAGAAAGtgATACAGGAATTATTTGAGTGTATTTCACACGCTGGACTGGAGGATGACTCAGTTCgggctttaaaaaagaaatatgaagTATAACCACTGTCTtcgggagagaaagaggagtaCTGGATTCACCTTTCTATCACTGGTCATttctcaaaacataaaaagacatCCTGTTCTCCTGCAACCTAATAATTCACCATTGTTGTATAAGACATGATTTTGTTTCTCTAAGTTGAGACTTGGAAAGTGCTAAAAGTTCCAAATGATGCAATACcagtttgtttaatttgtttgacTAGATAAACATGTTTTAGAAGTAATTAAAATGACTGGGCAGTGTTTAATAATACAGAATGTATTGTACattatgtggacaaaagtatttggacatcggcttgtttattgtttcttctgcttttatttttattaaaataaaaaaagagttgaaACCACCTGACCTCAtctccaactctccaactcattaaaagtatttaatgGAGCAcgatcatttcagagaacaccaAACTACCACATCTCAACTTATCAATGCTGGGAGTTTTGTACACCTCTAATCCATGCGGGCCAGTAAGCTTGGTGCAAGgaggtttgtgtttttctgatcCAGAGTGTCCTGTCTGTTGGAAATACTTCTTTACAGGCACTAGACAAGCTGTGGATGTGCAATTGCACATCCGTGTCAAAATGGTCCTCATTCATTCAATGTAATTTGAGTGAATTTTGCATGTGATAAGGTAGTAAAAACCTGCTCCTGAccaagtgtaaagtgtgtgacACAAAGTATAATTTGCCTTGACTGCAATTGATTTAAGTCTATGAGGCACTGTAGAGATGCTTGTGCAGGTTTTGTTATGAAATAAAATTTTGGGAGGAGGAATA
>XR_002650202.1
ATGAATATCTCTGTTCGGGTTTATTCGCAAAGGCTGCTGGTAGTTGGCTGTCATGGCGCTGAACCCAAACAGACAAGATCAGCGTGCGTTCTGCTGAGTAACGAGactgaaaaaaacactgcagcatGTCGGGGGGCAATAAAGCCATTGAGCTGCAGATGCAGATGCGTCAGAATTCGGAGGATCTCCAGAACTTCATGAGGGAGCTTGAAACCTGGGAGGTcgacataaaaaagaaagatgaagAGCTTCGCACAGGAAGTGTAACAGAATCACAGAAAACTCTTCCACCTGTGAGAAACAAAGATTACAAGAAGAAACGACGCGTCAAAGGTAAAGTTCCTGACAAGAACAGCCAAGAAGAGCAGAAGCCAGTACAGAGAATAAAATCATATGATTATCAGTCATGGGAAAAGTTTGATGTGGATAAAGCTCTTGAGACAGTGGACAAAGAAGAGAGCCCAGAATCGAATGACTCTGACTCGGAGGAGGTGCAGGTGGACAGAGACCTGGCaatgaaagagaaggagaaaGGCAACCAGTTCTTTAAAGACGGAAAGTATGACGAGGCCATTGAATGCTACACCAGAGGAATGAGTGCTGACCCATACAATCCTGTTCTGCCGACAAACCGAGCAGCATCTTTCTTCagacttaaaaaGTATGCTGTTGCAGAGTCCGACTGTAACCTGGCTATAGCGCTGGACAGCAAGTACATTAAAGCCTATGCCAGAAGAGGGGCTGCACGTTTTGCTCATAATAACCATCAGGGTGCTTTAGAAGATTACGAAATGGTTTTGAAGTTGGACCCTGAAAACCTAGATGCTCAGAATGAGATCAAGAAGCTAAGCCAGTGTTTCTCCTGTCAGGCTTTAGCTTCtcaaaaacagagagaagatAAGGTAGAGAAGACTTTGGTTGAAGTGCTGCCTGCTGAGGAAGCAAAGCCTAAACACATAGAAGAGGAGCAGCAGAGAAGACAGGAGGCAGTGGTGCAGAAGGACCGGGGTAATGCTTACTTCAAGGAGGGAAAGTATGAGGCAGCTGTGGAGAGCTACACCAAAGGCATGGAGGCAGATGCCACAAATGCTTTACTCGCTGCTAACAGAGCTATGGCTTACCTCAAACTTGAAAGGTATGCTGAAGCAGAAGAGGACTGCAGTAAGGCCATTGCTCTGGACAGCACCTACTTAAAGGCTTTCGCCCGACGTGGCACAGCTAGAGCTGCTCTGGGCCATCTTACTGAAGCCAAGGAAGatTTCGAGCAGGTTCTGAGGCTTGAACCGGGAAACAAACAGGCAATGAATGAGCTGAAAAAACTGAATATGGAGATGACTTCTAGTGGGCTACAGCCGGCAGAAGGAACTCAAAGAAGAACAGTTCAACCGGTCAATAAACCAGAACATCTCAGATCTACGaagccaatgaaaagaATGGAAATTGAAGAAGTTGGTGGAGAGCTGACAGACGTAATGCAGCCTCAGAGATCGACCGCTGCTGGAAACTCCTCAAGACCTGGACCAGTGCCAAGTGTGACTGCTTCTTTCTCAGAGAGAGAAATGCAAGGTGAAGCTTCTCCACTCTCATGTTCCCCCTCTGCCAAGATCCTGAAAATCGAGGAGCTGTCAGACACTCCTTCACAACCTCCAACCAAAGACTCTGAAGGAGATTCCCTCAGAAAAAGACAGCACTGCATAAAGAGGAAAAAGCCACCGGAAGTATGGAGCAAACCTCATCCCTATCCTCTACTTCAGTCCAATCCGAGGTCATTCCTCCACCCCCCACAAACGGCTTCCAGCTAGAAGCAGACTTGAGGAAGATTGGTGATCATCTTGAAGTCAGCTACAGATATTTAAAGCAAATTCACCCTGAAGCCTACGAGAAGATTTTTCAAAACTCTCTGGAGCCTGACATCCTTAATAAGATTTTGAAAGTACTTCAGAGCTTTTACGTCAAgAATGAGGAGCCATCAATCATACTGGCAGTCCTGAAAAGCTTGTCAAAAGTGAGAAGGTTTGAGATGACTGTTATGTTCATGTCTTCTGCTGAAAAGAAAGtgATACAGGAATTATTTGAGTGTATTTCACACGCTGGACTGGAGGATGACTCAGTTCgggctttaaaaaagaaatatgaagTATAACCACTGTCTtcgggagagaaagaggagtaCTGGATTCACCTTTCTATCACTGGTCATttctcaaaacataaaaagacatCCTGTTCTCCTGCAACCTAATAATTCACCATTGTTGTATAAGACATGATTTTGTTTCTCTAAGTTGAGACTTGGAAAGTGCTAAAAGTTCCAAATGATGCAATACcagtttgtttaatttgtttgacTAGATAAACATGTTTTAGAAGTAATTAAAATGACTGGGCAGTGTTTAATAATACAGAATGTATTGTACattatgtggacaaaagtatttggacatcggcttgtttattgtttcttctgcttttatttttattaaaataaaaaaagagttgaaACCACCTGACCTCAtctccaactctccaactcattaaaagtatttaatgGAGCAcgatcatttcagagaacaccaAACTACCACATCTCAACTTATCAATGCTGGGAGTTTTGTACACCTCTAATCCATGCGGGCCAGTAAGCTTGGTGCAAGgaggtttgtgtttttctgatcCAGAGTGTCCTGTCTGTTGGAAATACTTCTTTACAGGCACTAGACAAGCTGTGGATGTGCAATTGCACATCCGTGTCAAAATGGTCCTCATTCATTCAATGTAATTTGAGTGAATTTTGCATGTGATAAGGTAGTAAAAACCTGCTCCTGAccaagtgtaaagtgtgtgacACAAAGTATAATTTGCCTTGACTGCAATTGATTTAAGTCTATGAGGCACTGTAGAGATGCTTGTGCAGGTTTTGTTATGAAATAAAATTTTGGGAGGAGGAATA
>XR_002650203.1
CCCCGCCTGGACTCGACTCACACTCCGAGAGAGGGCATTTTCGGTTCTGCTCGTCACGTGGTTCAGCAGCAGGAAGCTAAAGactgaaaaaaacactgcagcatGTCGGGGGGCAATAAAGCCATTGAGCTGCAGATGCAGATGCGTCAGAATTCGGAGGATCTCCAGAACTTCATGAGGGAGCTTGAAACCTGGGAGGTcgacataaaaaagaaagatgaagAGCTTCGCACAGGAAGTGTAACAGAATCACAGAAAACTCTTCCACCTGTGAGAAACAAAGATTACAAGAAGAAACGACGCGTCAAAGGTAAAGTTCCTGACAAGAACAGCCAAGAAGAGCAGAAGCCAGTACAGAGAATAAAATCATATGATTATCAGTCATGGGAAAAGTTTGATGTGGATAAAGCTCTTGAGACAGTGGACAAAGAAGAGAGCCCAGAATCGAATGACTCTGACTCGGAGGAGGTGCAGGTGGACAGAGACCTGGCaatgaaagagaaggagaaaGGCAACCAGTTCTTTAAAGACGGAAAGTATGACGAGGCCATTGAATGCTACACCAGAGGAATGAGTGCTGACCCATACAATCCTGTTCTGCCGACAAACCGAGCAGCATCTTTCTTCagacttaaaaaGTATGCTGTTGCAGAGTCCGACTGTAACCTGGCTATAGCGCTGGACAGCAAGTACATTAAAGCCTATGCCAGAAGAGGGGCTGCACGTTTTGCTCATAATAACCATCAGGGTGCTTTAGAAGATTACGAAATGGTTTTGAAGTTGGACCCTGAAAACCTAGATGCTCAGAATGAGATCAAGAAGCTAAGCCAGTGTTTCTCCTGTCAGGCTTTAGCTTCtcaaaaacagagagaagatAAGGTAGAGAAGACTTTGGTTGAAGTGCTGCCTGCTGAGGAAGCAAAGCCTAAACACATAGAAGAGGAGCAGCAGAGAAGACAGGAGGCAGTGGTGCAGAAGGACCGGGGTAATGCTTACTTCAAGGAGGGAAAGTATGAGGCAGCTGTGGAGAGCTACACCAAAGGCATGGAGGCAGATGCCACAAATGCTTTACTCGCTGCTAACAGAGCTATGGCTTACCTCAAACTTGAAAGGTATGCTGAAGCAGAAGAGGACTGCAGTAAGGCCATTGCTCTGGACAGCACCTACTTAAAGGCTTTCGCCCGACGTGGCACAGCTAGAGCTGCTCTGGGCCATCTTACTGAAGCCAAGGAAGatTTCGAGCAGGTTCTGAGGCTTGAACCGGGAAACAAACAGGCAATGAATGAGCTGAAAAAACTGAATATGGAGATGACTTCTAGTGGGCTACAGCCGGCAGAAGGAACTCAAAGAAGAACAGTTCAACCGGTCAATAAACCAGAACATCTCAGATCTACGaagccaatgaaaagaATGGAAATTGAAGAAGTTGGTGGAGAGCTGACAGACGTAATGCAGCCTCAGAGATCGACCGCTGCTGGAAACTCCTCAAGACCTGGACCAGTGCCAAGTGTGACTGCTTCTTTCTCAGAGAGAGAAATGCAAGGTGAAGCTTCTCCACTCTCATGTTCCCCCTCTGCCAAGATCCTGAAAATCGAGGAGCTGTCAGACACTCCTTCACAACCTCCAACCAAAGACTCTGAAGGAGATTCCCTCAGAAAAAGACAGCACTGCATAAAGAGGAAAAAGCCACCGGAAGTATGGAGCAAACCTCATCCCTATCCTCTACTTCAGTCCAATCCGAGGTCATTCCTCCACCCCCCACAAACGGCTTCCAGCTAGAAGCAGACTTGAGGAAGATTGGTGATCATCTTGAAGTCAGCTACAGATATTTAAAGCAAATTCACCCTGAAGCCTACGAGAAGATTTTTCAAAACTCTCTGGAGCCTGACATCCTTAATAAGATTTTGAAAGTACTTCAGAGCTTTTACGTCAAgAATGAGGAGCCATCAATCATACTGGCAGTCCTGAAAAGCTTGTCAAAAGTGAGAAGGTTTGAGATGACTGTTATGTTCATGTCTTCTGCTGAAAAGAAAGtgATACAGGAATTATTTGAGTGTATTTCACACGCTGGACTGGAGGATGACTCAGTTCgggctttaaaaaagaaatatgaagTATAACCACTGTCTtcgggagagaaagaggagtaCTGGATTCACCTTTCTATCACTGGTCATttctcaaaacataaaaagacatCCTGTTCTCCTGCAACCTAATAATTCACCATTGTTGTATAAGACATGATTTTGTTTCTCTAAGTTGAGACTTGGAAAGTGCTAAAAGTTCCAAATGATGCAATACcagtttgtttaatttgtttgacTAGATAAACATGTTTTAGAAGTAATTAAAATGACTGGGCAGTGTTTAATAATACAGAATGTATTGTACattatgtggacaaaagtatttggacatcggcttgtttattgtttcttctgcttttatttttattaaaataaaaaaagagttgaaACCACCTGACCTCAtctccaactctccaactcattaaaagtatttaatgGAGCAcgatcatttcagagaacaccaAACTACCACATCTCAACTTATCAATGCTGGGAGTTTTGTACACCTCTAATCCATGCGGGCCAGTAAGCTTGGTGCAAGgaggtttgtgtttttctgatcCAGAGTGTCCTGTCTGTTGGAAATACTTCTTTACAGGCACTAGACAAGCTGTGGATGTGCAATTGCACATCCGTGTCAAAATGGTCCTCATTCATTCAATGTAATTTGAGTGAATTTTGCATGTGATAAGGTAGTAAAAACCTGCTCCTGAccaagtgtaaagtgtgtgacACAAAGTATAATTTGCCTTGACTGCAATTGATTTAAGTCTATGAGGCACTGTAGAGATGCTTGTGCAGGTTTTGTTATGAAATAAAATTTTGGGAGGAGGAATA
>XR_002650204.1
ATGAATATCTCTGTTCGGGTTTATTCGCAAAGGCTGCTGGTAGTTGGCTGTCATGGCGCTGAACCCAAACAGACAAGATCAGCGTGCGTTCTGCTGAGTAACGAGactgaaaaaaacactgcagcatGTCGGGGGGCAATAAAGCCATTGAGCTGCAGATGCAGATGCGTCAGAATTCGGAGGATCTCCAGAACTTCATGAGGGAGCTTGAAACCTGGGAGGTcgacataaaaaagaaagatgaagAGCTTCGCACAGGAAGTGTAACAGAATCACAGAAAACTCTTCCACCTGTGAGAAACAAAGATTACAAGAAGAAACGACGCGTCAAAGGTAAAGTTCCTGACAAGAACAGCCAAGAAGAGCAGAAGCCAGTACAGAGAATAAAATCATATGATTATCAGTCATGGGAAAAGTTTGATGTGGATAAAGCTCTTGAGACAGTGGACAAAGAAGAGAGCCCAGAATCGAATGACTCTGACTCGGAGGAGGTGCAGGTGGACAGAGACCTGGCaatgaaagagaaggagaaaGGCAACCAGTTCTTTAAAGACGGAAAGTATGACGAGGCCATTGAATGCTACACCAGAGGAATGAGTGCTGACCCATACAATCCTGTTCTGCCGACAAACCGAGCAGCATCTTTCTTCagacttaaaaaGTATGCTGTTGCAGAGTCCGACTGTAACCTGGCTATAGCGCTGGACAGCAAGTACATTAAAGCCTATGCCAGAAGAGGGGCTGCACGTTTTGCTCATAATAACCATCAGGGTGCTTTAGAAGATTACGAAATGGTTTTGAAGTTGGACCCTGAAAACCTAGATGCTCAGAATGAGATCAAGAAGCTAAGCCAGGCTTTAGCTTCtcaaaaacagagagaagatAAGGTAGAGAAGACTTTGGTTGAAGTGCTGCCTGCTGAGGAAGCAAAGCCTAAACACATAGAAGAGGAGCAGCAGAGAAGACAGGAGGCAGTGGTGCAGAAGGACCGGGGTAATGCTTACTTCAAGGAGGGAAAGTATGAGGCAGCTGTGGAGAGCTACACCAAAGGCATGGAGGCAGATGCCACAAATGCTTTACTCGCTGCTAACAGAGCTATGGCTTACCTCAAACTTGAAAGGTATGCTGAAGCAGAAGAGGACTGCAGTAAGGCCATTGCTCTGGACAGCACCTACTTAAAGGCTTTCGCCCGACGTGGCACAGCTAGAGCTGCTCTGGGCCATCTTACTGAAGCCAAGGAAGatTTCGAGCAGGTTCTGAGGCTTGAACCGGGAAACAAACAGGCAATGAATGAGCTGAAAAAACTGAATATGGAGATGACTTCTAGTGGGCTACAGCCGGCAGAAGGAACTCAAAGAAGAACAGTTCAACCGGTCAATAAACCAGAACATCTCAGATCTACGaagccaatgaaaagaATGGAAATTGAAGAAGTTGGTGGAGAGCTGACAGACGTAATGCAGCCTCAGAGATCGACCGCTGCTGGAAACTCCTCAAGACCTGGACCAGTGCCAAGTGTGACTGCTTCTTTCTCAGAGAGAGAAATGCAAGGTGAAGCTTCTCCACTCTCATGTTCCCCCTCTGCCAAGATCCTGAAAATCGAGGAGCTGTCAGACACTCCTTCACAACCTCCAACCAAAGACTCTGAAGGAGATTCCCTCAGAAAAAGACAGCACTGCATAAAGAGGAAAAAGCCACCGGAAGTATGGAGCAAACCTCATCCCTATCCTCTACTTCAGTCCAATCCGAGGTCATTCCTCCACCCCCCACAAACGGCTTCCAGCTAGAAGCAGACTTGAGGAAGATTGGTGATCATCTTGAAGTCAGCTACAGATATTTAAAGCAAATTCACCCTGAAGCCTACGAGAAGATTTTTCAAAACTCTCTGGAGCCTGACATCCTTAATAAGATTTTGAAAGTACTTCAGAGCTTTTACGTCAAgAATGAGGAGCCATCAATCATACTGGCAGTCCTGAAAAGCTTGTCAAAAGTGAGAAGGTTTGAGATGACTGTTATGTTCATGTCTTCTGCTGAAAAGAAAGtgATACAGGAATTATTTGAGTGTATTTCACACGCTGGACTGGAGGATGACTCAGTTCgggctttaaaaaagaaatatgaagTATAACCACTGTCTtcgggagagaaagaggagtaCTGGATTCACCTTTCTATCACTGGTCATttctcaaaacataaaaagacatCCTGTTCTCCTGCAACCTAATAATTCACCATTGTTGTATAAGACATGATTTTGTTTCTCTAAGTTGAGACTTGGAAAGTGCTAAAAGTTCCAAATGATGCAATACcagtttgtttaatttgtttgacTAGATAAACATGTTTTAGAAGTAATTAAAATGACTGGGCAGTGTTTAATAATACAGAATGTATTGTACattatgtggacaaaagtatttggacatcggcttgtttattgtttcttctgcttttatttttattaaaataaaaaaagagttgaaACCACCTGACCTCAtctccaactctccaactcattaaaagtatttaatgGAGCAcgatcatttcagagaacaccaAACTACCACATCTCAACTTATCAATGCTGGGAGTTTTGTACACCTCTAATCCATGCGGGCCAGTAAGCTTGGTGCAAGgaggtttgtgtttttctgatcCAGAGTGTCCTGTCTGTTGGAAATACTTCTTTACAGGCACTAGACAAGCTGTGGATGTGCAATTGCACATCCGTGTCAAAATGGTCCTCATTCATTCAATGTAATTTGAGTGAATTTTGCATGTGATAAGGTAGTAAAAACCTGCTCCTGAccaagtgtaaagtgtgtgacACAAAGTATAATTTGCCTTGACTGCAATTGATTTAAGTCTATGAGGCACTGTAGAGATGCTTGTGCAGGTTTTGTTATGAAATAAAATTTTGGGAGGAGGAATA

Function

symbol description
rpap3 Is expressed in alar plate midbrain region; forerunner cell group; immature eye; and optic tectum. Orthologous to human RPAP3 (RNA polymerase II associated protein 3).

NR:

description
RNA polymerase II-associated protein 3-like isoform X1

GO: NA

KEGG:

id description
K23002 RPAP3; RNA polymerase II-associated protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671556.1 False 2921 mRNA 0.43 17 24368373 24383022
XR_002650202.1 True 2950 misc_RNA 0.43 17 24368373 24383022
XR_002650203.1 False 2927 misc_RNA 0.43 17 24367492 24383022
XR_002650204.1 False 2935 misc_RNA 0.43 17 24368373 24383022

Neighbor

gene id symbol gene type direction distance location
lrig3 lrig3,LOC104942525 coding upstream 47426 24296917 ~ 24320066 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding upstream 249779 24026461 ~ 24117713 (+)
etv6 etv6 coding upstream 413772 23916306 ~ 23953720 (+)
rerg rerg,LOC107662225,LOC107669035 coding upstream 819235 23451563 ~ 23548257 (+)
lrp6 lrp6,LOC100705426 coding upstream 1282448 23020384 ~ 23085044 (+)
LOC111192915 NA coding downstream 76381 24459403 ~ 24461001 (+)
LOC103034593 LOC108442311 coding downstream 127467 24510489 ~ 24517356 (+)
LOC103033942 LOC103033942,LOC108442313 coding downstream 172579 24555601 ~ 24559622 (+)
snupn snupn,LOC107673280,LOC107738646 coding downstream 995415 25378437 ~ 25387120 (+)
ptpn9 ptpn9,ptpn9a,LOC107727494,LOC107673262,LOC107560010 coding downstream 1011413 25394435 ~ 25423664 (+)
G66488 NA non-coding upstream 43460 24323810 ~ 24324032 (+)
G66480 slc16a7 non-coding upstream 136306 24223005 ~ 24231186 (+)
G66476 NA non-coding upstream 181109 24186134 ~ 24186383 (+)
G66472 NA non-coding upstream 229307 24137905 ~ 24138185 (+)
G66389 NA non-coding upstream 389546 23976240 ~ 23977946 (+)
G66514 NA non-coding downstream 1897 24384919 ~ 24389774 (+)
G66524 mapk12b,LOC103035956,LOC108442322,LOC107658737,LOC108279513,LOC107656379,LOC107710136,LOC107579544,LOC106609457 non-coding downstream 25498 24408520 ~ 24414278 (+)
G66556 NA non-coding downstream 122319 24505341 ~ 24505541 (+)
G66577 NA non-coding downstream 196131 24579153 ~ 24579353 (+)
G66643 NA non-coding downstream 335575 24718597 ~ 24718895 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other upstream 647398 23698152 ~ 23720094 (+)
G66303 NA other upstream 883559 23483333 ~ 23483933 (+)
G66296 NA other upstream 922815 23444174 ~ 23444677 (+)
eps8 eps8 other upstream 1044131 23222514 ~ 23323361 (+)
crebl2 crebl2,LOC107707978 other upstream 1229481 23131080 ~ 23138011 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other downstream 135600 24518622 ~ 24552340 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other downstream 216144 24599166 ~ 24684580 (+)
cspg4 cspg4 other downstream 806163 25189185 ~ 25300875 (+)
LOC111192916 NA other downstream 1697430 26080452 ~ 26092119 (+)
oaz2 oaz2,LOC108432726 other downstream 3766238 28149260 ~ 28220857 (+)

Expression


Co-expression Network