LOC103044724


Basic Information

Item Value
gene id LOC103044724
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 30199049 ~ 30236846 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671644.1
GTCACTTTGAGCACCAGTGTGCCTGGAGGGCTGCTGGATGGAGGACACCATGTGACCAACAGACAGCCAGGAAAAGGCAGGCAGCATGCTTCGTCTGCGGGGGGCACTGGTAGTTTGCTTCTTGCTCTTGTTCTTCAGCTCCGTCTGTGAAGGGTTTTTCGGCAAAAAGAGGCCAAAGCCCACTGCACAAGCAAAGGAAGCCTCAGGCATATGGGGAGGGTCCTACTTTGGAAAATGGATTCCGGAAGTGAAACTTCCAATTCCACCTTTGAGTTCTTTGGGACTGCCCTTGAATTTCTTGCCAGGGACTGTGGAAGGACAGGTTGCCACAACTTTACAAAACCCAACAACAGAAAGTCCACCAACAAGTACAGACATTATGAACATGCAAGATTTAAAAGGGTCTTTGAGAGCAAACGTTGCCACAACTGTACAAAATCCACCAACAAAAAGTCAACCAACAAGTACAGACACTGCCAATGTACAAGATTTCAAAGAGTCTTTAAAGGCACAGGTTGCCTCAACTGCACAAAACCCACCAACAGAAAGTCCACAAACAAGTGCCAACATCATCACCTCACAAGATTACAAACTGTCATTAAAGACAGATGTTGTAACAACTGTGCAAAATCTAACAACAGGAAGTCCCCCAATAAGTGCAGACATCATCAATGTTCAGAAAGGCAATAGAGGACTGGTGATGGCACGACTTACCACACCTTCTTACCAGTCAATCACAGTAGTTCCATCTGATAACGTCACAACTACCCCTGCTCCAAAAGGAACTGTTCTTCCACAAAGGGGTACCAGACCACCCAAAGATGAACTCCTCAGAGCAAGACATCAAACAGACAATCCCAAGCCCATATTACACCCTTACCCAAGCTATGACCTTGATCTCTGGCCCTCCAATGGAGGTAGTAACACAGAAAAAGCATCTACACAAGATACCCATGGATATGTGATCATAACATCAGATTCTTCTATACAGGAATCATCAACCTCCACAACACAGGTGAGCTGGAGCGCCAAGCCAACCACCAAGTCTGTCAAATTACAAAATGCAAAGAAGAAAAGACCCCAAAACAAACCAATTTCCACAACCACTGGTTTCCAGACATCAGAGTTACCATCATCAGAGCCAAGGCTACATCCCACTCCACCAACACCGGTTCAGTCAACTACTATAAAACAGCAGCCAGCTGTTTCCACTTCACTGCCAACTGAAGCCACCACACAGCTCCAGCCTAGTCCCACCACTACCCCGGAGGATTCCATCAACCCCAGGCAAGCTGTGGAGGACGTTACAGCCATGGCAACTGTTCCCAACTGGACTCTGGAGACTGAGGCTACTGATGGGGATCCTGATAGATTTCCATGGTCTGTGCCGACTACAAGCGAGCCAGAGGTGGAAAGCTTAAGCAGCATCCAGGATTTACCTCACGCTGCTTTAACCACAGAGCCGTCAGCAGGAGCTTTAAAGCCAGAAGCAACATCCGAGGAGCCCACTGACCCGACAGCAGcggaaagagagaagaaaacatCGACCAGCATGACAGCATCAAAGACTACAGaTATGCCCACCACAGCGTCAGAGGACTGGCTGGAAGATATGACCCAAGAGTCTGCTCTCCCAGACTGCAACGCAGAACGTTCTGGAATCTGCAGTTCCAATGGCACTTGGGCCCCCACCTACCCCAATGACaaaagcagcagcaacaacaacaacaacagcagcagcagcgaagCCACCAGCTCCACAAACCATTCACAGACCCCAGTCCTGCCTCCATCACTGCCCATGCTTGTACCGCTATATTCTGACTGGAACAGTGCTATGGCAGCCTGGGGTTTGGCGTGGGATGCACATGTTTATGGACTGGGCACTGTGTTCTGTCTGATTTCTCTAGCCTCCGCCCTTAACCTTCTCTGTCTGCCCTTGTGCTGCCCGTCAGGATGTGGCTACTTTGCTCTGGTCAGCCTTTTCCTGCTGGCTGCAGGCTGCACCAGAGCTTTCGCCCTGCTGTACGATGCCTACGGACACCAGGACCGCATGCCATCCACGGAGGCGTCGTTGCTGTTGTACGAGGCCCCGTTCCCTTGCATGACCGCAGCCTTTGGCTTGGTCTTCCTCCTTCTGTCGATGCGCTCCCGCATGCAGCTTTCCTACTCTGCCTTCCAGAGGCCCTGCTTCCTAGCCTGTCTGGTTCTGTTGCACTTCGCTGCTGCTTTCGGTCCAGTCACATTACTGCGAGTTGACCAGCAGGGGGCACCACTCTGCCTCTTCCTCTCCCTGATCTCCAGAGGTGCTTTTGTGGCTCTAGCTACTTTCTTATCTGTTGCTTACTTTGTGTTCTACTGCTACGTACGTGCCGACTCCAAGCATATTTACCACCTGAACAACACCTCTCCGACGCCGGCCGAACGCTACAATCGCTGCCCTTTTGCAGAGAGCCAAGACTGGGACCGAGCTGCGGTTGCAGTATTCCTTTCTGCCATCTTTTCTCTGGTCTGTGCCGGCCTCCAGCTCTATGCCATGCTGCATGCCCTGGGTGTTGCTGGGGGGGCAGAGGTATTCCAACCCTGGCCTTGGTGGACCTTCCAGTTTAGTTGCAGAGTTTGCGAGGCCGTCGTTTGCCTCACACTGGCGTTGGTGGTGTCCCAACCGGTTTACTGCTCAGAGCACCTCCCGCAACCTGGCAATTGCTGGATGGAAATCTTAGCTGCAAAGTCCCCCATCATTCCTGGAAGCTACCAGTGGACCCTTACGCAGCAGGAGAAGCTGGCTATCTGCGATCCAATCGGACATGGTGAGACAGAATGTCTACCCCTTTACACACTGGTGGATGACCGAATGGGCAGCCTTAATGGACTGGATCTCTTGTACCACAGTAACCGTGCTCTCGCCTACAGAGACTTGGACCTGGATCTACCTGAAACCCTGCCAAACACTGGAGCTCCATCTGTGGGTTCCTCCTTCACCAGCGACTCAACAGCAGATCTGCGGCCTCCGTCACCTATCAACCTGCGCCGCAGCATTGACGAAGCACTGTTCAGCGAAGCACTTTTCCCAATGAGCCTCTTCAGCCCCATGAGGCCCTTTACTTCCAGCAACCACTCCTTGGAGGGCAGGGACACAGGTTCTAGCAGTGGGCAAACTCTCAAAGACACTCATCCGTCTGACCCAGGCTTGTACCGAACCTCCTCCTGTGTGGAGATGTTACCCCAAGCCCCTCTCCCAGTTCCAGCCCAGCAGGAAGCGTCCTTCATTCCCTCCCCTTCTCCCTCACCGACATCCTCCTGCTGTTCATCTCCAGAGCACTGGAGAGGCAGCTCTAGCTCTTGCTCCCTCTACAGGCCATCCATAGCTGGCTCCTCTCTGGTGCTTTGTTCTAGTCCAGAAGGACACAACCCTCCTCCACCTTCTACAATCAGTGGAAACTCTGGACACACTGCCCCCAACACTGCCCTACAGGGGTCCGGCCAGCAAAGACATTACAGAACTCAAAATTTAGAACAGCAAAATGAACTTGATCAGTCTGTGCAAGAAGAGTTTATCAGTGTGTGCAGACAGATAGATGCTCTCAGCATCTGCAGTGAGACTATCGACCTGTAGAATAAGCACTCCAGTAGAGCACAcatgcagaaaataaataaatgtatgacaGTAATGGACTGGATGAATAACAGTGAGCAAGTATATGAGCAAGTTGTTTGACGATTGTCTGTTACCAAGGTGCTATAGCTGAACTTGCTTGTTCCAGATTGTGGCCTGAAAGCAATGGTTGTCCAGTGAGATGAAAATGTGCCAAATGTTTGATATGTAAGATTTATCTATAACGATGAGCGACTTTTTTGGGACGATTCCATTCTGAATAACAAGTGCCACCAGCTGCCAAAAGCTACGAAGACGTAGACAAAGTTTTGTAGAATATTTCTCAAGGTTATTGGTCAAGAACATTTGTAAAGCTTTTATGGATTTtctcaagaactttaaaagtggcATTTGTACAAGGTTTGTACAATACCTGACTCTTTGTCGATATGGATACTACTGTGAGTGAAATAAGACTACTGACTACCATACTGTACTACATGTAACTCCAACTGTTAGCACTACAGaggttagatattaaaaatatttaacaaatacatttattcagtACCTTTAGAGTTGGCCTTCTTGATTTAGGCCTTCGCTTGTACAGCTTCTTCACCATATTATTCTGAGGCAGATTCCTGTGACCAAATTTGGTGTGGGTGGAGCTTTGCAGGTTTAAAGGGGAATAAAACTTGCCCTGTATCTTCAGGAgactctatactctctatactgcCAGTGAAGCACCCTCTACTGGTGGCTTTAGTTAATATCtcattttaagctttttttgttttctctgtaGCATCAAGTTGGCTCTGGATATGAGTGACTGCCATTCATCGctctcatttaaaatgtttaatatgaaCTACAGTTAAGTTAATTATTTATCTGTGGAGTCTCAGGCCATCATTTCCATgcagtttaaaataaagacaaataaCTTTTTGTTCGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671644.1 True 4557 mRNA 0.49 3 30199049 30236846

Neighbor

gene id symbol gene type direction distance location
LOC103030285 NA coding upstream 366328 29827479 ~ 29832721 (+)
LOC103033872 NA coding upstream 695738 29500727 ~ 29503311 (+)
commd9 commd9 coding upstream 757518 29438561 ~ 29441531 (+)
rtcb rtcb coding upstream 1024066 29162678 ~ 29174983 (+)
ptn ptn,LOC106609498 coding upstream 1742037 28354062 ~ 28457012 (+)
calu calua,LOC108432523,LOC107587143,LOC107725564,LOC107578970 coding downstream 57749 30294595 ~ 30304041 (+)
tnpo3 tnpo3 coding downstream 70853 30307699 ~ 30330031 (+)
lamtor4 lamtor4,si:dkey-159a18.7,LOC107590499,LOC107557308,LOC107699063,LOC107694163 coding downstream 365344 30602190 ~ 30605157 (+)
gcc1 gcc1 coding downstream 377224 30614070 ~ 30620972 (+)
LOC103025373 LOC108432542 coding downstream 405997 30642843 ~ 30659834 (+)
G67593 NA non-coding upstream 54773 30143998 ~ 30144276 (+)
G67585 NA non-coding upstream 95332 30103180 ~ 30103717 (+)
G67574 NA non-coding upstream 133324 30065299 ~ 30065725 (+)
G67571 NA non-coding upstream 184632 30014205 ~ 30014417 (+)
G67565 NA non-coding upstream 263095 29935748 ~ 29935954 (+)
G67604 NA non-coding downstream 126 30236972 ~ 30261734 (+)
G67605 impdh1b,impdh1,LOC102791786,LOC102312042,LOC102212509 non-coding downstream 6180 30243026 ~ 30244385 (+)
G67615 NA non-coding downstream 40317 30277163 ~ 30277585 (+)
G67616 NA non-coding downstream 43978 30280824 ~ 30281532 (+)
G67651 NA non-coding downstream 133853 30370699 ~ 30376934 (+)
G67453 cat,LOC102775586,LOC102293936 other upstream 606762 29585976 ~ 29592287 (+)
G67459 NA other upstream 640383 29557136 ~ 29558666 (+)
oaz2 oaz2,LOC108432726 other upstream 1978192 28149260 ~ 28220857 (+)
LOC111192916 NA other upstream 4106930 26080452 ~ 26092119 (+)
cspg4 cspg4 other upstream 4898174 25189185 ~ 25300875 (+)
LOC111193014 NA other downstream 50689 30287535 ~ 30289624 (+)
G67690 atp6v1f,LOC101079638,LOC106511462,LOC104938441 other downstream 361755 30598601 ~ 30600595 (+)
G67692 arf5,zgc:77650,LOC105916194,LOC101172462,LOC107387912,LOC105020167,LOC105888566 other downstream 371529 30608375 ~ 30611978 (+)
G67698 fam3c other downstream 437099 30673945 ~ 30679186 (+)
G67746 NA other downstream 563910 30800756 ~ 30807364 (+)

Expression


Co-expression Network