CI01000010_03952874_03957173


Basic Information

Item Value
gene id CI01000010_03952874_03957173
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 3952874 ~ 3957244 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_03952874_03957173.mRNA
ATGGTGAAGAGAAGAGTGGATGATGTTTATGGGATGGAGCGCGTACATTTAAAGGCTGTTTCGGTGAGGACTCTGGAAATCCGGAGCGCATTCACCACAGTCATGTCTACGGGTCGCAGTGAGGATTTTACCAACAAGTGCAGAGAAGTTACAAGCGACGTTTGTATGAGTTCATCAGAACTTGTGAGTGGCCTATTAGATCCGGCTTCTCCATCTGCTTTACCCCAAAAAATGGCATCTGATGCTTTCCAAGGCAAAGTAGTTTGCACGGGGTGTAGAGATGACATCCTAGACAGGCATCTCCTTAAGGTAAATGACTTGTGCTGGCATGTGCGATGCCTTTCATGCTGTGTGTGCCAAACCACTCTGAGCGGACACACAACCTGCTATGTTAGAGGGCGAGAGGTCTTCTGCAAACTAGATTACTTCAGGAGGTATCGGACATGGTGCTCGTGCTGTGGGGAAACGGTTCACTCCACAGATTGGGTACGCAGGGCAAAGGGAAATGTTTACCACCTGGCATGCTTCTTGTGCTTCTCCTGTAAGAGGCAGCTATCCACAGGCGAGGAGTTTGCTTTGGTTGGGCAAAAATTGTTGTGTCGAGTCCATTATGACAGCATGCTGGACAAACTCAAAGGGGCTTCTGAAAAAGGTTGTGAGATAAATCAAAAGCCATCAAAAAGAGCACGTACCAGTTTCACTTCAGACCAGCTACAGGTTATGCAGGCTCAGTTTGCTCAGGACAATAACCCAGATGCACAGACACTTCAGAGACTTGCTGAACAGACTGGGCTTAGCCGACGTGTCATTCAGGTGTGGTTTCAAAACTGTCGTGCCCGTCATAAGAAGCACATCTCTCCCCCTCATTCAGGAATATTGACAGGAGGACTGTCATCACTCCGGCCGGTTTCCGACCTAAATGAACTGCATTATACAGACACATCCATGCTTACAGCCTTACACAGCATCTGCATCGATGTTCACACTCCATCTCTACTCTATCAGCCATTACTGTCCAACCAATCAACGCACCTACCAGTCAGCAGCAGCTAAACATTTTACAATTCAGTTGTAAATGTTGTGCCAATTATTATAACAATAATTATGCCACTAACACCTTTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_03952874_03957173.mRNA True 1124 mRNA 0.47 8 3952874 3957244

Neighbor

gene id symbol gene type direction distance location
CI01000010_03920171_03935066 TNNI3K coding upstream 17015 3920171 ~ 3935859 (+)
CI01000010_03915860_03918633 FPGT coding upstream 33737 3915860 ~ 3919137 (+)
CI01000010_03902240_03911029 ACOT11 coding upstream 41419 3902106 ~ 3911455 (+)
CI01000010_03882122_03883663 NA coding upstream 69112 3882122 ~ 3883762 (+)
CI01000010_03781620_03785840 GM11353, RPS8B, RPS8 coding upstream 166891 3781620 ~ 3786254 (+)
CI01000010_04010515_04020837 ST6GALNAC5B coding downstream 53271 4010515 ~ 4020898 (+)
CI01000010_04025764_04026729 NA coding downstream 68117 4025361 ~ 4027266 (+)
CI01000010_04046204_04137642 PRKCZ coding downstream 88960 4046204 ~ 4137642 (+)
CI01000010_04165584_04232583 SKIA, SKI coding downstream 208340 4165584 ~ 4232583 (+)
CI01000010_04368541_04374080 NA coding downstream 411227 4368471 ~ 4374174 (+)
G62788 NA non-coding upstream 106433 3818656 ~ 3846441 (+)
G62791 NA non-coding upstream 136369 3816031 ~ 3816505 (+)
G62748 NA non-coding upstream 195073 3757200 ~ 3757801 (+)
G62738 NA non-coding upstream 248673 3703989 ~ 3704201 (+)
G62868 NA non-coding downstream 6504 3963748 ~ 3964163 (+)
G62869 NA non-coding downstream 7409 3964653 ~ 3965140 (+)
G62871 NA non-coding downstream 9345 3966589 ~ 3981486 (+)
G62893 NA non-coding downstream 97351 4054595 ~ 4061190 (+)
G62895 NA non-coding downstream 134801 4092045 ~ 4095387 (+)
G62856 NA other upstream 12929 3937757 ~ 3939945 (+)
G62838 NA other upstream 59081 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 621688 3313695 ~ 3347796 (+)
CI01000010_03197380_03199958 NA other upstream 752966 3197380 ~ 3200044 (+)
CI01000010_00946586_00947327 NA other upstream 3005330 945182 ~ 947577 (+)
G62983 NA other downstream 490928 4448172 ~ 4449327 (+)
CI01000010_04640858_04683752 OSBPL9 other downstream 683597 4640516 ~ 4683778 (+)
G63403 NA other downstream 1738201 5695445 ~ 5707085 (+)
G63405 NA other downstream 1750727 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 1799709 5788332 ~ 5790204 (+)

Expression


Co-expression Network