LOC111192924


Basic Information

Item Value
gene id LOC111192924
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 841037 ~ 844690 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002650173.1
CAGATACTGTCACCACCAGAAATTATTCTACTCAGCGGAGACGTATCTTTTCTGAAGGATATGAGGATGTAAGTTTTCACTCGGGAAGTATCATCTCTGAAGATCAGCATTCAGGATATGAGGATGTGGATGAAGATCTTCTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002650173.1 True 145 ncRNA 0.41 3 841037 844690

Neighbor

gene id symbol gene type direction distance location
LOC111192892 NA coding upstream 31040 809234 ~ 809997 (+)
syt10 syt10,LOC107744086,LOC107656242,LOC107565666,LOC107592193,LOC107658793 coding upstream 60240 749881 ~ 780797 (+)
LOC103021355 LOC103021355,LOC108426405,LOC108279735,LOC107757248,LOC107694301,LOC100694258,LOC107590616 coding upstream 219295 614113 ~ 621742 (+)
LOC107197032 NA coding upstream 250932 586693 ~ 590105 (+)
LOC103022716 NA coding upstream 266536 570221 ~ 574501 (+)
LOC111192895 NA coding downstream 48679 893369 ~ 912312 (+)
LOC111192896 NA coding downstream 68201 912891 ~ 914305 (+)
LOC111192897 NA coding downstream 74484 919174 ~ 927544 (+)
LOC111192898 NA coding downstream 84920 929610 ~ 943921 (+)
LOC111192900 NA coding downstream 156197 1000887 ~ 1007827 (+)
G61016 NA non-coding upstream 5764 833987 ~ 835273 (+)
G61011 NA non-coding upstream 40167 800649 ~ 800870 (+)
G60996 NA non-coding upstream 100139 740691 ~ 740898 (+)
G60983 NA non-coding upstream 217602 616774 ~ 623435 (+)
G60910 NA non-coding upstream 370348 455836 ~ 470689 (+)
LOC103039262 NA non-coding downstream 943 845633 ~ 952485 (+)
LOC111192928 NA non-coding downstream 9021 853711 ~ 858509 (+)
LOC111192927 NA non-coding downstream 70210 914900 ~ 916812 (+)
LOC111192923 NA non-coding downstream 203107 1047797 ~ 1049056 (+)
LOC111192863 NA non-coding downstream 205440 1050130 ~ 1051090 (+)
LOC103045537 NA other upstream 216028 599659 ~ 625009 (+)
LOC103023024 cry1,LOC103023024,LOC108426403,LOC108279922,LOC105900698,LOC107560722 other upstream 282457 539518 ~ 558580 (+)
mrps33 mrps33,LOC106591474,LOC107694294,LOC107725593 other upstream 694263 144189 ~ 146774 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other downstream 8836 853526 ~ 1043316 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other downstream 600945 1445635 ~ 1481418 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other downstream 870127 1714817 ~ 1808930 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other downstream 1076705 1921395 ~ 1935499 (+)
G61575 NA other downstream 2451856 3296546 ~ 3303998 (+)

Expression


Co-expression Network