trnay-gua_3


Basic Information

Item Value
gene id trnay-gua_3
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 1816015 ~ 1816102 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnay-gua_3
CCTTCGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTaggtcgctggttcgaatccggCTCGAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnay-gua_3 True 73 tRNA 0.53 2 1816015 1816102

Neighbor

gene id symbol gene type direction distance location
trnay-gua_2 NA coding upstream 3157 1812771 ~ 1812858 (+)
LOC103023715 LOC103023715,LOC108436009,LOC108280003,LOC107562295,LOC107560735,LOC107757236,LOC107694310 coding upstream 122049 1630873 ~ 1693966 (+)
cracr2a NA coding upstream 411516 1397198 ~ 1404499 (+)
LOC111192900 NA coding upstream 808188 1000887 ~ 1007827 (+)
LOC111192898 NA coding upstream 872094 929610 ~ 943921 (+)
LOC103022887 gdi2,LOC108436005,LOC108279819,LOC107754057 coding downstream 10738 1826840 ~ 1841427 (+)
LOC103022369 LOC103022369,LOC108436003 coding downstream 26176 1842278 ~ 1845762 (+)
LOC103022068 asb13a.2,LOC103022068,LOC108436004,LOC108280001,LOC107754063,LOC107560715,LOC107655562 coding downstream 30436 1846538 ~ 1861838 (+)
mkrn1 mkrn1,LOC107725576 coding downstream 168771 1984873 ~ 2001629 (+)
tmem121b cecr6 coding downstream 187740 2003842 ~ 2005246 (+)
G61132 NA non-coding upstream 25583 1789535 ~ 1790432 (+)
G61131 NA non-coding upstream 54833 1758838 ~ 1761182 (+)
G61100 NA non-coding upstream 194458 1609125 ~ 1621557 (+)
G61085 NA non-coding upstream 310198 1505343 ~ 1505817 (+)
LOC111192863 NA non-coding upstream 764925 1050130 ~ 1051090 (+)
trnay-gua_4 NA non-coding downstream 301 1816403 ~ 1816490 (+)
trnay-gua_5 NA non-coding downstream 1966 1818068 ~ 1818155 (+)
trnay-gua_6 NA non-coding downstream 2412 1818514 ~ 1818601 (+)
trnay-gua_7 NA non-coding downstream 5146 1821248 ~ 1821335 (+)
trnay-gua_8 NA non-coding downstream 5587 1821689 ~ 1821776 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other upstream 7085 1714817 ~ 1808930 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other upstream 334597 1445635 ~ 1481418 (+)
G61014 NA other upstream 766959 806565 ~ 1049056 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other upstream 772699 853526 ~ 1043316 (+)
LOC103045537 NA other upstream 1191006 599659 ~ 625009 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other downstream 105293 1921395 ~ 1935499 (+)
G61575 NA other downstream 1480444 3296546 ~ 3303998 (+)
LOC111192936 NA other downstream 3924453 5740555 ~ 5765785 (+)
plxnb2 NA other downstream 3965989 5782091 ~ 5967735 (+)
c7h12orf75 NA other downstream 4166134 5982236 ~ 5993994 (+)

Expression


Co-expression Network