CI01000010_04356379_04367982


Basic Information

Item Value
gene id CI01000010_04356379_04367982
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4356337 ~ 4368250 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_04356379_04367982.mRNA
AGCTGTCATATTCCTCAACAGTCTTTGCATCACGTTCGGATTGCCGCGAAAAAGTACCAGCAAAACAGCACTGAGAGATCACTTCCGGTTTCTCCACGCGTCCTCCAGGACGCCAGAGGGAGCTTGAGGCTGTCAACTGAATTTCCATCCGATCAGCTGAAAGGAACTAAAGCTTGGATGTGTTACACGTGCTTATAGTATCGTAAACGTATACTCACATTTGTACATTAAATTTCACTCTTTGGAAACTCAGACATTACTTATCAAAATGCCGAAGGTTAAAGCCGAGAAAAAATCTCGAAAACATCAGGAGGTGAAGAGTCAAGGAATTATGTTCAATACTGGTATTGGTCAACATATTTTGAAAAACCCTTTGATTGTCAACGCCATCATAGAGAAGGCAGCACTACGACCGACAGATGTGGTTTTGGAAGTAGGTCCTGGAACTGGTAACATGACTGTCAAACTCCTGGAGAAAGCCAAGAAAGTTGTAGCATGCGAGTTGGACACCAGGCTTGTTGCTGAGCTTCAGAAAAGAGTCCAGTGCACTCCAATGCAGAACAAGCTTCAGATCCTCATAGGGGATGTCCTAAAGGCGGAGCTCCCCTTTTTTGATCTGTGCGTGGCTAACTTGCCTTATCAGGTATTGGTTCAAAGATTTTTCTCTTTGGTTGCTGTAGATCTGTCTTCTGAGCCACTGAGGGAATTTGCCATGCGCTTAGTGGCTAAACCAGGAGACAAGCTATACTGCAGATTGTCCATCAACACACAACTCCTAGCCCGCGTGGATCATCTCATGAAGGTAGGAAAAAACAACTTCAGACCACCTCCAAAAGTAGAGTCCAGCGTGGTGAGGATAGAGCCCAAAAATCCTCCGCCGCCTATCAACTTCCAGGAATTACAACAGGACTTCAACATTGCTCAGAAAATTGATGGCATCCTTCAAGAGTCGAAGTTTAGTGAAAAGAGGGCACGCTCCATGGATATAGATGATTTCATGACTAACGCATGTATGGTGCGGCTGTACGTTGAGGTATTCCCTGCGTGCTCAGTGGGACGTGGCACAGGAGCGCGGCTGGGGGCTGACCTGGGCCCCCCGTCGGATATTGATGTCTGCAGATGTTCACGTACAGAAAGGGCAGCCTCATCCCCTCCTGCTCCTGATAAATCATATAAGGGAGGGATTCACACTGCATTATTGATGGTCCACAGGGAGGGATGAGAGAGGGCTTACTAGAGAAAGAGAGAGAGAGAGAGAAAAAAA

Function

NR:

description
Zgc:101122

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_04356379_04367982.mRNA True 1264 mRNA 0.47 9 4356337 4368250

Neighbor

gene id symbol gene type direction distance location
CI01000010_04311215_04316218 NA coding downstream 39666 4310734 ~ 4316671 (-)
CI01000010_04153653_04157398 NA coding downstream 198199 4151880 ~ 4158138 (-)
CI01000010_04028461_04031710 NA coding downstream 324627 4028297 ~ 4031710 (-)
CI01000010_03992093_03992619 NA coding downstream 362731 3991101 ~ 3993606 (-)
CI01000010_03961520_03974921 SLC44A5B, SLC44A5, SLC44A5A coding downstream 381416 3961419 ~ 3974921 (-)
CI01000010_04374856_04376532 CENPH coding upstream 6258 4374508 ~ 4376946 (-)
CI01000010_04383043_04410672 MIER3B coding upstream 14621 4382871 ~ 4412332 (-)
CI01000010_04426092_04431357 PLK2B, PLK2 coding upstream 57174 4425424 ~ 4431387 (-)
CI01000010_04433165_04436747 NA coding upstream 64677 4432907 ~ 4436929 (-)
CI01000010_04445984_04469908 PDE4D coding upstream 77310 4445560 ~ 4470289 (-)
G64382 NA non-coding downstream 73252 4282756 ~ 4283085 (-)
G64237 NA non-coding downstream 119921 4229950 ~ 4236416 (-)
G64332 NA non-coding downstream 135409 4217753 ~ 4220928 (-)
G64169 NA non-coding downstream 297185 4057217 ~ 4059152 (-)
G64168 NA non-coding downstream 301005 4054537 ~ 4055332 (-)
G64280 NA non-coding upstream 136143 4504393 ~ 4521646 (-)
G64411 NA non-coding upstream 209494 4577744 ~ 4578094 (-)
G64418 NA non-coding upstream 245915 4614165 ~ 4615086 (-)
G64421 NA non-coding upstream 274639 4642889 ~ 4644040 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other downstream 456426 3890069 ~ 3899058 (-)
CI01000010_03527436_03530341 NA other downstream 824685 3527408 ~ 3530359 (-)
G61965 NA other downstream 2811286 1424425 ~ 1545051 (-)
G61888 NA other downstream 3110319 1244469 ~ 1246018 (-)
CI01000010_04612793_04613017 SMIM15 other upstream 244246 4612460 ~ 4613135 (-)
G64564 NA other upstream 680905 5049155 ~ 5242926 (-)
G64877 NA other upstream 1548007 5916257 ~ 5917011 (-)
G64918 NA other upstream 1725439 6093689 ~ 6096480 (-)
G65453 NA other upstream 3295441 7659435 ~ 7672343 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location