trnay-gua_5


Basic Information

Item Value
gene id trnay-gua_5
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 1818068 ~ 1818155 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnay-gua_5
TCTTCGATAGCTCAGTTGGTAGAGCGGAGGAGTGTAGATCCTTaggtcgctggttcaaatccggCTCGAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnay-gua_5 True 73 tRNA 0.50 2 1818068 1818155

Neighbor

gene id symbol gene type direction distance location
trnay-gua_2 NA coding upstream 5210 1812771 ~ 1812858 (+)
LOC103023715 LOC103023715,LOC108436009,LOC108280003,LOC107562295,LOC107560735,LOC107757236,LOC107694310 coding upstream 124102 1630873 ~ 1693966 (+)
cracr2a NA coding upstream 413569 1397198 ~ 1404499 (+)
LOC111192900 NA coding upstream 810241 1000887 ~ 1007827 (+)
LOC111192898 NA coding upstream 874147 929610 ~ 943921 (+)
LOC103022887 gdi2,LOC108436005,LOC108279819,LOC107754057 coding downstream 8685 1826840 ~ 1841427 (+)
LOC103022369 LOC103022369,LOC108436003 coding downstream 24123 1842278 ~ 1845762 (+)
LOC103022068 asb13a.2,LOC103022068,LOC108436004,LOC108280001,LOC107754063,LOC107560715,LOC107655562 coding downstream 28383 1846538 ~ 1861838 (+)
mkrn1 mkrn1,LOC107725576 coding downstream 166718 1984873 ~ 2001629 (+)
tmem121b cecr6 coding downstream 185687 2003842 ~ 2005246 (+)
trnay-gua_4 NA non-coding upstream 1578 1816403 ~ 1816490 (+)
trnay-gua_3 NA non-coding upstream 1966 1816015 ~ 1816102 (+)
G61132 NA non-coding upstream 27636 1789535 ~ 1790432 (+)
G61131 NA non-coding upstream 56886 1758838 ~ 1761182 (+)
G61100 NA non-coding upstream 196511 1609125 ~ 1621557 (+)
trnay-gua_6 NA non-coding downstream 359 1818514 ~ 1818601 (+)
trnay-gua_7 NA non-coding downstream 3093 1821248 ~ 1821335 (+)
trnay-gua_8 NA non-coding downstream 3534 1821689 ~ 1821776 (+)
G61168 NA non-coding downstream 35160 1853315 ~ 1855346 (+)
G61222 NA non-coding downstream 214848 2033003 ~ 2033287 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other upstream 9138 1714817 ~ 1808930 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other upstream 336650 1445635 ~ 1481418 (+)
G61014 NA other upstream 769012 806565 ~ 1049056 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other upstream 774752 853526 ~ 1043316 (+)
LOC103045537 NA other upstream 1193059 599659 ~ 625009 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other downstream 103240 1921395 ~ 1935499 (+)
G61575 NA other downstream 1478391 3296546 ~ 3303998 (+)
LOC111192936 NA other downstream 3922400 5740555 ~ 5765785 (+)
plxnb2 NA other downstream 3963936 5782091 ~ 5967735 (+)
c7h12orf75 NA other downstream 4164081 5982236 ~ 5993994 (+)

Expression


Co-expression Network