CI01000010_04534309_04549864


Basic Information

Item Value
gene id CI01000010_04534309_04549864
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4534178 ~ 4549959 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_04534309_04549864.mRNA
CCATAATATGGAAGAAAATATCTCTTACTACTTCAGTTTCATCGCAACTTGTATCAAGGACATACTTTACATATGAGAATGGCCCTGATAAGTGTTTCCGCTTGGCACATCTCTCTGGTGTTGGATCGGAAATGGGAAAAAGGGTAAAGAACGCTACTGAAATTCTGTTAAATCTATTTCAAAAGTGGCTTGTGACAGTTATCCGGATAGCGAGGGGGCAGCAGGAAAGGAAGTGTGAAATTAAGATTATAGAAAGCAATGCAAAAATCCTTCCTGAGCCCAGTAATCTGACACATTCAACAACAATAACAAAAGAACAATTAGTTCCATCATTTCTGTTGGCAAGAAATTGGAAGATTAGGATATTGGAGGATGAAGTGCAATATATAATTCTTCTTCCCTCAGTGTTTGCCTTTAGGGGGGAATGCTTGAAAGTGCGTTTATGCAGAAGCATCCGTCTGAGGAGGCGCGGGGAGTTCCGTGGCGACAGCCGGGGCGAAATGGAGGAGGGTGAGCGGCGGTGCCCCCGGGGTCGCTCCTGCTGCAGGAGGTTCTCCCGCAGGATCTTTACCAGGTCCTCGTTCAGCCCGACATGCTTGGGCATGGGCGGCACGGCCAGCGTGTCCTGCGGTAAACTCCCCAGGGCAGGGGAGAGCAAGGGTAAGCGAACGAACTCTGGGCGTCTCTGCGGACTCCACACGGGCAGCTCGCCGTACAAACGAGTGACTGGAATTAATCTGCGAAAAGCAGGAGAGCGCAAGATTGCGTGCTCCTGTCAGGACAACTGCCGAGCTGTGATGGTTTCAATGTGTTTTTGTATTGGCTCTCCTGCACTAATGTCTTGGGCCAGGCGATTGCCCACTCAAAATGATCAAACTTGTGTTATCTTTGTTGCTGCTCCTCAAACAGGAAGTGGTGTTTTGGGAATTTCAAGGTTTAGCACATGGTCAGTTTGGACCATAAAGAGGGGGCCGAGGACAGAGCTCTTACCAGAAGAGAAACAGGTCACGTTTTACCCAGGGAGGGCTGCAGAGCTGAAAGATTCCCCCTTCAGGGGGTCTGACACTTCAAGGCGACGGGAAAACCAAGGAGGCTAGCAATGAAGTTGGCCTATCACTTCCCTGGAAGCCATTTCTTCAAAAGCCTTTAGGAGCCACCACAACAAACAGCCGCAGAAGCCAATAACAGCCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_04534309_04549864.mRNA True 1192 mRNA 0.49 5 4534178 4549959

Neighbor

gene id symbol gene type direction distance location
CI01000010_04437892_04443935 RAB3C coding upstream 89732 4437429 ~ 4444446 (+)
CI01000010_04377762_04378990 MRPS36 coding upstream 155096 4377147 ~ 4379082 (+)
CI01000010_04368541_04374080 NA coding upstream 160004 4368471 ~ 4374174 (+)
CI01000010_04165584_04232583 SKIA, SKI coding upstream 301595 4165584 ~ 4232583 (+)
CI01000010_04046204_04137642 PRKCZ coding upstream 396536 4046204 ~ 4137642 (+)
CI01000010_04609294_04611679 NDUFAF2 coding downstream 59230 4609189 ~ 4611710 (+)
CI01000010_04614357_04631136 NA coding downstream 64270 4614229 ~ 4631460 (+)
CI01000010_04640858_04683752 OSBPL9 coding downstream 90557 4640516 ~ 4683778 (+)
CI01000010_04686730_04692395 CALR coding downstream 136701 4686660 ~ 4692633 (+)
CI01000010_04696294_04717129 EPS15 coding downstream 146335 4696294 ~ 4717222 (+)
G62980 NA non-coding upstream 52044 4394980 ~ 4482134 (+)
G63006 NA non-coding upstream 53603 4475671 ~ 4480575 (+)
G62982 NA non-coding upstream 86992 4445516 ~ 4447186 (+)
G62948 NA non-coding upstream 204180 4329758 ~ 4329998 (+)
G62947 NA non-coding upstream 207468 4326489 ~ 4326710 (+)
G63056 NA non-coding downstream 2240 4552199 ~ 4552403 (+)
G63069 NA non-coding downstream 4793 4554752 ~ 4554981 (+)
G63070 NA non-coding downstream 7033 4556992 ~ 4557299 (+)
G63078 NA non-coding downstream 22318 4572277 ~ 4572494 (+)
G63058 NA non-coding downstream 40210 4590169 ~ 4591139 (+)
G62983 NA other upstream 84851 4448172 ~ 4449327 (+)
G62856 NA other upstream 594233 3937757 ~ 3939945 (+)
G62838 NA other upstream 640385 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 1202992 3313695 ~ 3347796 (+)
CI01000010_03197380_03199958 NA other upstream 1334270 3197380 ~ 3200044 (+)
G63403 NA other downstream 1145486 5695445 ~ 5707085 (+)
G63405 NA other downstream 1158012 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 1206994 5788332 ~ 5790204 (+)
G63524 NA other downstream 1824599 6374558 ~ 6374667 (+)

Expression


Co-expression Network