CI01000010_05047527_05065421


Basic Information

Item Value
gene id CI01000010_05047527_05065421
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 5047527 ~ 5066870 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_05047527_05065421.mRNA
CTAATAAAGGGATTGTACTCTGTAAACACTGCTGACATTTCCTCTCCATTTGGACGCTTCGCTTGGCGCGTTGTGGGGAGACATCCGTGTGGCTGGGGGAGCTGTGCGCTTTTCGCGCGCTTGCACCTGCTGGTTACGTCAAATCCTTCCTCTCGCGCGGCAGCACGCCGTCGTCTTGGAAACGCTCCTTCAGCGTCGTTATCCTGTGTGAGGTTGTATGAACGGATGATGGAAGAAAGCAGCAGAGAACATCTCGATACTGATAATGAAGCAGGGGGAGAGGATGCTCTGGTGGGGAATGTGAACAAACTGATGATCACTCCTCCAGGATACACCGGACCACCCAAGAAAGGTCATGTCATCTTCGATGCCTGCTTTGAGAGTGGATGCTACCACCCTGATAACAGACCCCTCTTAGCAGCACTGTTGACCTTCTCTTCGCCACAGGCACACCAAGGACCCTTCAGCTTCTTCTGTCTTTATCTCCCAACTCTCCGCAGGAAAGATTATTCTTATTGCCAGGCCAGGGATATCGAGCAGGAACTAGAGGAAGAGATAACGAAAAGAGAGCAAGGGAGTGTGTTAGGGAGAGATGAAAACAAAAAGACAAAGCCTGAAAAAAACAGCCGACAGAAAAAGAAAAGGACCTGGACTGCTGTCCCGCTGGCAAAGCGTCTTTTGTCCTTTGTAGGACTTCATATAATTAACTCGTAAAGAGATAGCATGAAATTTGAAGTGACTTCTGTTTACCCACTAAGGACTCAAATCGTACAGCTAACAAAATGATAAGGCAAGGAATGAAAAGGAAGGAGAACAAAGCGGTACATAATCTAAATCTGGATATAAAGGGGTAACAATGTTAACCCTGCATTCTCCCGAAATAAGATGAAGAGGGAAGACCACAGTTGACGGGGATGAGTGGCTCTTTTAAGAGAGTGCCTCCAGGAGTCTGGGGCTTCAGAAAAGCCGACATGTTTCATGGCTGAGATCGATGATACAATTTAGTACATTTCACAGTGAATGCCTCCCTGTGACCTGCCGACTGTTATGAAATGAACACACTTGCTTTGGGCCCTTTTTTTTATTCAAGCAATACCGATACAAGGGCAGCAAGAAAATTTGAACCTTTTCAGATTCATTGGCCCCTTTATCACTGCTGCCAAGCGTGTGGGCTGCAAAGCGCAGATGTAGACGCTCTGTATTTTGTGCCACTGAGGGTTCTGCGTATCCATGCTAAAAGATAGATGTCAAGCAATTACTACTCTTGAATTTATTTCCTGCCCCATTTTTGATAAAATGCTAATGCATGTGATTATTTTACTATTTAGTACCATTTTAATGACAGTCTAGTGATTTGGGTGACATTGTGTAATTGATGTCATTAATTAGCATCTAGAGGCCGCTTAGCTAAAAACCCACATTCATGCACAGCACGGCCTTCCTCATGGGACTCCCGGAATGGCGATTGAAATAGTGCTGGCGTTGTGAAGAATGCTAGTTTGAAGGCTTTTACAGTTTTGACACCTGTTAAAGACGTTCTGAGAGTTAGAGGTCATGGCTCTATTCTTGTCTTGATTTAACGATAAAAATGTGAAAAAGTTTAGCAGAGATAAAGAGAGAAAAAGAGGGACAGAGAGAGAGATTGATGTTGCCTCGGTGACACCTTGCCTTTAGACCGAGAGCAGGAAAAACTGCATGAAGAGAATTTGGCTGGAGGTCTTGAGCCAGATACCTTTCCTGGGGTTTGAATCAATTCCAGCTTTATCAGTTGTCCGTGTCCAGGTATTCTCACCCGTGGGAGAGTCTGATGTGTTTTCCAATAATGAAAAGGAGCACATGGCAAAAACACATTTAAGAGGTGGCCAGTCTCCAGAGTCACTTCTAATTTCCAATGCAGTTTGTTACAGAAGAAAAAAAAACTTGTAGAAAGGTTGAAAGATATCTGTGTCCAATGGCGTTATCAGTACCTGGGATGCTCTAGACTCACTACATTACCACATTTCTCACCAGTAATTAAAGTACAGCTAGTCAATAGATACCAGATAGTGCTTATCCTTGGTGCTCAAATAGATGTGTTTATCCCTATTATTTATTGTTTTATAATCAGCTATTTTGCATATCATATATATGAGTTCCATACTATGTTTTACCATGTATATTTTA

Function

NR:

description
Cytosolic carboxypeptidase 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_05047527_05065421.mRNA True 2163 mRNA 0.43 3 5047527 5066870

Neighbor

gene id symbol gene type direction distance location
CI01000010_05012978_05018219 NA coding upstream 29181 5011379 ~ 5018346 (+)
CI01000010_04934550_04955403 NA coding upstream 90897 4933856 ~ 4956630 (+)
CI01000010_04871254_04873119 DMRTA2, DMRT5 coding upstream 173609 4870540 ~ 4873918 (+)
CI01000010_04803003_04849985 FAF1 coding upstream 197542 4803003 ~ 4849985 (+)
CI01000010_04753467_04770912 RNF11L2, RNF11B, RNF11 coding upstream 275853 4753231 ~ 4771674 (+)
CI01000010_05185530_05200227 NA coding downstream 118251 5185121 ~ 5200514 (+)
CI01000010_05238328_05242974 NA coding downstream 170159 5237029 ~ 5243396 (+)
CI01000010_05308426_05318353 BEND5 coding downstream 241422 5308292 ~ 5319096 (+)
CI01000010_05359191_05385419 NA coding downstream 292321 5359191 ~ 5385684 (+)
CI01000010_05414058_05426498 NA coding downstream 347188 5414058 ~ 5426687 (+)
G63162 NA non-coding upstream 55037 4983616 ~ 4992490 (+)
G63151 NA non-coding upstream 93764 4953542 ~ 4953763 (+)
G63149 NA non-coding upstream 100859 4946465 ~ 4946668 (+)
G63359 NA non-coding downstream 503301 5570171 ~ 5579186 (+)
G63328 NA non-coding downstream 524506 5591376 ~ 5591852 (+)
G63332 NA non-coding downstream 567317 5634187 ~ 5638232 (+)
G63384 NA non-coding downstream 576007 5642877 ~ 5643077 (+)
G63386 NA non-coding downstream 577786 5644656 ~ 5645797 (+)
CI01000010_04640858_04683752 OSBPL9 other upstream 393534 4640516 ~ 4683778 (+)
G62983 NA other upstream 598200 4448172 ~ 4449327 (+)
G62856 NA other upstream 1107582 3937757 ~ 3939945 (+)
G62838 NA other upstream 1153734 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 1716341 3313695 ~ 3347796 (+)
G63403 NA other downstream 628575 5695445 ~ 5707085 (+)
G63405 NA other downstream 641101 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 690083 5788332 ~ 5790204 (+)
G63524 NA other downstream 1307688 6374558 ~ 6374667 (+)
G63572 NA other downstream 1519058 6585928 ~ 6617806 (+)

Expression


Co-expression Network