G113457


Basic Information

Item Value
gene id G113457
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 24956470 ~ 24956914 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU153309
attagggtcagggttaggttgtagggttgatttatggttaaggttaagattagggtcaGGGTTAAGCTGTTTgattgattcatggttgaggttagggtcAGGGTTAGGTTGTAGAGTTGagtcatggttgaggttagggtcAGGGTTAGGTTGTAGAGTTGagtcatggttgaggttagggtcagggttaggttgtagggttgattcatggttgaggttagggtcAGGGTTAGGTTGTAGAGTTGagtcatggttgaggttagggtcagggttaggttgtagggttgattcatggttgaggttagggtcAGGGTTAGGTTGTAGAGTTGagtcatggttgaggttagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153309 True 348 lncRNA 0.46 2 24956470 24956914

Neighbor

gene id symbol gene type direction distance location
pitpnc1 pitpnc1,LOC108424775,LOC106926703 coding upstream 85030 24746737 ~ 24871440 (+)
tex2 tex2 coding upstream 213994 24669054 ~ 24742476 (+)
LOC103029188 LOC103029188 coding upstream 292919 24662700 ~ 24663551 (+)
axin2 axin2 coding upstream 365864 24489324 ~ 24590606 (+)
nav1 nav1 coding upstream 702637 24115447 ~ 24253833 (+)
kpna2 kpna2 coding downstream 45162 25002076 ~ 25014745 (+)
smurf2 smurf2,LOC108432078,LOC107723598 coding downstream 68575 25025489 ~ 25090565 (+)
LOC103046784 ddx5,LOC106588346 coding downstream 159212 25116126 ~ 25124666 (+)
polg2 NA coding downstream 169533 25126447 ~ 25130316 (+)
srp68 srp68 coding downstream 189183 25146097 ~ 25168999 (+)
G113456 NA non-coding upstream 12717 24943428 ~ 24943753 (+)
G113451 NA non-coding upstream 69355 24885431 ~ 24887115 (+)
G113447 NA non-coding upstream 77820 24799367 ~ 24878650 (+)
G113450 NA non-coding upstream 149117 24804503 ~ 24807353 (+)
G113414 NA non-coding upstream 528267 24427909 ~ 24428203 (+)
G113552 NA non-coding downstream 80624 25037538 ~ 25100883 (+)
G113557 NA non-coding downstream 118291 25075205 ~ 25075941 (+)
G113680 NA non-coding downstream 443540 25400454 ~ 25401186 (+)
G113682 NA non-coding downstream 461705 25418619 ~ 25510014 (+)
G113683 NA non-coding downstream 469546 25426460 ~ 25426736 (+)
G113422 NA other upstream 481132 24474078 ~ 24475338 (+)
LOC103027315 manbal,LOC107666036,LOC107744407 other upstream 536791 24411009 ~ 24419679 (+)
LOC103026829 LOC108272263,LOC108410934,LOC106582708,LOC107744363,LOC107696444,LOC107587591,LOC107560506,LOC107666116 other upstream 554739 24298179 ~ 24401731 (+)
LOC103026336 mybph,LOC108441582,LOC107587590,LOC107740275,LOC107696393,LOC107744364 other upstream 668243 24261682 ~ 24288227 (+)
G113335 NA other upstream 854887 24066156 ~ 24101583 (+)
LOC103030782 NA other downstream 293470 25250384 ~ 25254130 (+)
G113642 acox1 other downstream 304472 25261386 ~ 25262221 (+)
ube2o ube2o other downstream 385239 25342153 ~ 25396983 (+)
G113979 snrpb,LOC101173217 other downstream 2390535 27347449 ~ 27352444 (+)
LOC103037845 necab3,LOC108431835,LOC108271560,LOC107666033,LOC107553901,LOC107740282,LOC107587636,LOC107744391 other downstream 2434100 27391014 ~ 27489522 (+)

Expression


Co-expression Network