Gene
RNA
| Item | Value |
|---|---|
| gene id | G113908 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035909.1 |
| NCBI id | CM008312.1 |
| chromosome length | 44161018 |
| location | 26615936 ~ 26616188 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU153907 | True | 253 | lncRNA | 0.34 | 1 | 26615936 | 26616188 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tfap2c | tfap2c | coding | upstream | 270163 | 26323691 ~ 26345773 (+) |
| rtfdc1 | rtfdc1 | coding | upstream | 296443 | 26271043 ~ 26319493 (+) |
| LOC111193668 | NA | coding | upstream | 541485 | 26069067 ~ 26074451 (+) |
| LOC111193667 | NA | coding | upstream | 553426 | 26059181 ~ 26062510 (+) |
| LOC103035650 | NA | coding | upstream | 577842 | 26034676 ~ 26038094 (+) |
| snta1 | snta1,LOC107681301,LOC107587638 | coding | downstream | 960046 | 27576234 ~ 27640363 (+) |
| ralgapb | ralgapb | coding | downstream | 1360193 | 27976381 ~ 28022819 (+) |
| kcnq2 | kcnq2,LOC100537363 | coding | downstream | 1425584 | 28041772 ~ 28127236 (+) |
| arfrp1 | arfrp1 | coding | downstream | 1525740 | 28141928 ~ 28149421 (+) |
| stmn3 | stmn3 | coding | downstream | 1537919 | 28154107 ~ 28167135 (+) |
| G113902 | NA | non-coding | upstream | 109905 | 26505804 ~ 26506031 (+) |
| G113897 | NA | non-coding | upstream | 155661 | 26460038 ~ 26460275 (+) |
| G113867 | NA | non-coding | upstream | 203114 | 26320736 ~ 26412822 (+) |
| G113868 | NA | non-coding | upstream | 319885 | 26292460 ~ 26296051 (+) |
| G113846 | NA | non-coding | upstream | 353830 | 26206189 ~ 26262106 (+) |
| G113930 | NA | non-coding | downstream | 201029 | 26817217 ~ 26879565 (+) |
| G113937 | NA | non-coding | downstream | 420956 | 27037144 ~ 27065794 (+) |
| G113955 | NA | non-coding | downstream | 581786 | 27197974 ~ 27198195 (+) |
| G113960 | NA | non-coding | downstream | 641014 | 27257202 ~ 27257439 (+) |
| G113962 | NA | non-coding | downstream | 650144 | 27266332 ~ 27266545 (+) |
| ube2o | ube2o | other | upstream | 1218953 | 25342153 ~ 25396983 (+) |
| G113642 | acox1 | other | upstream | 1353715 | 25261386 ~ 25262221 (+) |
| LOC103030782 | NA | other | upstream | 1361806 | 25250384 ~ 25254130 (+) |
| G113422 | NA | other | upstream | 2140598 | 24474078 ~ 24475338 (+) |
| LOC103027315 | manbal,LOC107666036,LOC107744407 | other | upstream | 2196257 | 24411009 ~ 24419679 (+) |
| G113979 | snrpb,LOC101173217 | other | downstream | 731261 | 27347449 ~ 27352444 (+) |
| LOC103037845 | necab3,LOC108431835,LOC108271560,LOC107666033,LOC107553901,LOC107740282,LOC107587636,LOC107744391 | other | downstream | 774826 | 27391014 ~ 27489522 (+) |
| LOC103044650 | LOC108427558 | other | downstream | 2591555 | 29207743 ~ 29281311 (+) |
| LOC111193669 | NA | other | downstream | 3266183 | 29882371 ~ 29887978 (+) |
| G114698 | NA | other | downstream | 3510147 | 30126335 ~ 30129896 (+) |
