Gene
RNA
| Item | Value |
|---|---|
| gene id | G114110 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035909.1 |
| NCBI id | CM008312.1 |
| chromosome length | 44161018 |
| location | 28005507 ~ 28006349 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU154179 | True | 843 | lncRNA | 0.37 | 1 | 28005507 | 28006349 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| snta1 | snta1,LOC107681301,LOC107587638 | coding | upstream | 365144 | 27576234 ~ 27640363 (+) |
| tfap2c | tfap2c | coding | upstream | 1659734 | 26323691 ~ 26345773 (+) |
| rtfdc1 | rtfdc1 | coding | upstream | 1686014 | 26271043 ~ 26319493 (+) |
| LOC111193668 | NA | coding | upstream | 1931056 | 26069067 ~ 26074451 (+) |
| LOC111193667 | NA | coding | upstream | 1942997 | 26059181 ~ 26062510 (+) |
| kcnq2 | kcnq2,LOC100537363 | coding | downstream | 35423 | 28041772 ~ 28127236 (+) |
| arfrp1 | arfrp1 | coding | downstream | 135579 | 28141928 ~ 28149421 (+) |
| stmn3 | stmn3 | coding | downstream | 147758 | 28154107 ~ 28167135 (+) |
| LOC103025927 | NA | coding | downstream | 166225 | 28172574 ~ 28198880 (+) |
| sp7 | sp7 | coding | downstream | 218310 | 28224659 ~ 28229015 (+) |
| G114026 | NA | non-coding | upstream | 339532 | 27661540 ~ 27665975 (+) |
| G114020 | NA | non-coding | upstream | 359357 | 27642654 ~ 27646150 (+) |
| G114021 | NA | non-coding | upstream | 367967 | 27551064 ~ 27637540 (+) |
| G114011 | NA | non-coding | upstream | 490639 | 27513399 ~ 27514868 (+) |
| G114008 | NA | non-coding | upstream | 536207 | 27468980 ~ 27469300 (+) |
| G114127 | NA | non-coding | downstream | 60341 | 28066690 ~ 28130292 (+) |
| G114154 | NA | non-coding | downstream | 165162 | 28171511 ~ 28171989 (+) |
| G114159 | NA | non-coding | downstream | 210858 | 28217207 ~ 28217435 (+) |
| G114168 | NA | non-coding | downstream | 291145 | 28297494 ~ 28297775 (+) |
| G114162 | LOC108431801 | non-coding | downstream | 306291 | 28312640 ~ 28316397 (+) |
| LOC103037845 | necab3,LOC108431835,LOC108271560,LOC107666033,LOC107553901,LOC107740282,LOC107587636,LOC107744391 | other | upstream | 515985 | 27391014 ~ 27489522 (+) |
| G113979 | snrpb,LOC101173217 | other | upstream | 653063 | 27347449 ~ 27352444 (+) |
| ube2o | ube2o | other | upstream | 2608524 | 25342153 ~ 25396983 (+) |
| G113642 | acox1 | other | upstream | 2743286 | 25261386 ~ 25262221 (+) |
| LOC103030782 | NA | other | upstream | 2751377 | 25250384 ~ 25254130 (+) |
| LOC103044650 | LOC108427558 | other | downstream | 1201394 | 29207743 ~ 29281311 (+) |
| LOC111193669 | NA | other | downstream | 1876022 | 29882371 ~ 29887978 (+) |
| G114698 | NA | other | downstream | 2119986 | 30126335 ~ 30129896 (+) |
| G114841 | NA | other | downstream | 2843960 | 30850309 ~ 30880553 (+) |
| G115024 | ngf,LOC103031633,LOC105909845 | other | downstream | 3886936 | 31893285 ~ 31894351 (+) |
