G114402


Basic Information

Item Value
gene id G114402
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 28931924 ~ 28985639 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU154627
TTATGTTGAATTTTTTTATGATCAAAATATGTCTTGAAGTTTGAAAACTAGCAATGTATAGGTTCCCACTTTGACGTGACCTTCACAGTGTGGTGCATCCACATGGAAAGGGTTGGCAAACAGGATTTCCTGATTAACTGATGTCATCAAACTGATAAATATTTCAAAAGTAAAGTCCCATTTTCACACAAAATGGGAAAAGTGGTGGATATTATGTCATTCTCTATTGAAAATACTCATAAAAAGAAtttgttgccatatggcaacaacATGCAATAGAGGGTTAAGagagcacaattggccttgctctctcttg

Function

NR:

description
PREDICTED: transcription intermediary factor 1-beta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154627 True 316 lncRNA 0.35 2 28931924 28985639

Neighbor

gene id symbol gene type direction distance location
stac3 stac3 coding upstream 67141 28849141 ~ 28864783 (+)
r3hdm2 r3hdm2 coding upstream 84569 28770225 ~ 28847355 (+)
arhgap9 arhgap9 coding upstream 342434 28517631 ~ 28589490 (+)
ddit3 ddit3,LOC106582666 coding upstream 439612 28486708 ~ 28492312 (+)
dctn2 dctn2 coding upstream 477904 28429241 ~ 28454020 (+)
nxph4 nxph4 coding downstream 8567 28994206 ~ 29085444 (+)
shmt2 shmt2,LOC103359782,LOC106515133 coding downstream 105204 29090843 ~ 29132063 (+)
h6pd h6pd coding downstream 259642 29245281 ~ 29259083 (+)
rbp7 rbp7,LOC107713528,LOC107666991,LOC107555975,LOC107708738 coding downstream 282067 29267706 ~ 29271449 (+)
c13h3orf67 NA coding downstream 574092 29559731 ~ 29609556 (+)
G114400 NA non-coding upstream 328 28931350 ~ 28931596 (+)
G114399 NA non-coding upstream 5107 28926415 ~ 28926817 (+)
G114392 NA non-coding upstream 51069 28877249 ~ 28880855 (+)
G114390 NA non-coding upstream 59028 28872607 ~ 28872896 (+)
G114318 NA non-coding upstream 104000 28824715 ~ 28827924 (+)
G114433 NA non-coding downstream 197775 29183414 ~ 29260686 (+)
G114438 NA non-coding downstream 244568 29230207 ~ 29284778 (+)
G114439 tardbp,LOC108427558,LOC105025427 non-coding downstream 295819 29281458 ~ 29282414 (+)
G114474 NA non-coding downstream 472388 29458027 ~ 29557691 (+)
G114475 NA non-coding downstream 489207 29474846 ~ 29475567 (+)
LOC103037845 necab3,LOC108431835,LOC108271560,LOC107666033,LOC107553901,LOC107740282,LOC107587636,LOC107744391 other upstream 1442402 27391014 ~ 27489522 (+)
G113979 snrpb,LOC101173217 other upstream 1579480 27347449 ~ 27352444 (+)
ube2o ube2o other upstream 3534941 25342153 ~ 25396983 (+)
G113642 acox1 other upstream 3669703 25261386 ~ 25262221 (+)
LOC103030782 NA other upstream 3677794 25250384 ~ 25254130 (+)
LOC103044650 LOC108427558 other downstream 222104 29207743 ~ 29281311 (+)
LOC111193669 NA other downstream 896732 29882371 ~ 29887978 (+)
G114698 NA other downstream 1140696 30126335 ~ 30129896 (+)
G114841 NA other downstream 1864670 30850309 ~ 30880553 (+)
G115024 ngf,LOC103031633,LOC105909845 other downstream 2907646 31893285 ~ 31894351 (+)

Expression


Co-expression Network