G114867 (LOC103036684,LOC108427584,LOC108231650,LOC107666081,LOC107729743,LOC107549315)


Basic Information

Item Value
gene id G114867
gene name LOC103036684,LOC108427584,LOC108231650,LOC107666081,LOC107729743,LOC107549315
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 31110333 ~ 31114539 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU155179
TTAGGTAATAACAAGCTCACCCCGTGATTTAGATTtcgatttttttgtgtgtgagtttgttttctgtttcacAGAGTGCTCAAACAGATTTACAGCATTACACTCCAGTGCAATTATATATGGTCTTATTCAGATACAAATCATCTGTAACaaatatatagagagatttatatatatacttttatataacaGCAAAATATAGGTTTGACTTTGGTGGCAACACTCTATTCTGATGTAATACAGTGCTTTACATGTGCAAGAGGAAACAATACAcaatatcacacacactcatgcacactCACTTCTACACCCACACTCATCCGTGCACACAAACACTAATCTCTATCTACTTCGGCTCCCAACTCTCTGTGGAATGCTTTGGGGTGATGGATTTGCTAATGAGTATGAAAGTCCCCCAAACACGCACCCCCTGATTTCACAAAAGCCATGTGTCCTTGAAACTGGCCACGCAAGATCTGATAATGAATTCAGAACTCATTATGAGTCATCTTTTATCATGCCTGAAACGATACGCATCAAAAATAATGAGCGTTAGAAGGTCGGGGATGGGTGTGCACAGTTGCGTGTGATGACAGGCAAAAAACGCTGCCGCTGTATTTCAGTCTTTCTTCTGTAAAAGTGGGGATTTGGGTTTTTTTGCTTTGTAAAACATCTATGAGGCTCTATCTGGTGGGATTTTGGAAGATTACAGAAGTGATATGTGTGATGATAAAGTGCAGCAGAAAAGAGCAAACAGCAGAGTTCCTGCAGCAGGTACTACTTAAACCCCCTactgacagagagaaagggaagagTGGTGTCTGCATAGTAATGTGCTGTCTGGATTTGGATACGCACTCATAGCGGATGTCTGCAGCATACGAATACATCCAGTGATATTCTGGATGAttcgaaaaaaatatatattgcgtAATATTATGTAACCAAAATCCAACATCTTCCAAATGTCAAATGCCAACATCGTATTGATCTAATACTCCAACATTTAGTTGTAAGGCATGGTGAGCAAAACCCAACATCTTCCAAATGTCACATGCCAACATAGTATTGATCAAATATACCAACATTTAGTTGTAAGGCATGGTGACCAAAATCCAACATCCTGTAAATGTCACATGCCAACATTGTTTTGATCTAAAATATACCAACATTTAGTTGTAAGGCATGGTGTCCAAAACCCAACATCTTCCAAATGTCACATGCCAACATCGTATTGATGTAATACACCAACATTTAGTTGTAAGGCATTGTGACGAAAACCCAACCTATTCCACATTTCATAATGTCACACCCACACATAGAGAAATTCTAACATTGTTGGAATGAAGTTTTTTGGTCATGGTGTTAAGTGACCAAAATCTAACGTCTGTCTAATGTTaaaccctgatttttttttaaggattgtGATTTGGTTTCTGAGTTCCATCCAAAATTCAACATCTCTAGAATGTTTGGTTTTGACATCAATTCATTTGATTTTTAACTATAAATGTATCATCTTTCTGATGTTAGTCTCTGCCAAACTGACCTGCTGATTATGTGGCCAGCACGGTGCCTCAGAGTCCCTCTCTGACCTCAGGCCTGTAGTTTTGTGGTACAAAGGAAGACTAAATAATAAACACTCAGTTCTTCCAGACTGCTTTAGCAAACTGAGGTGTGCTGGGCGAGTCCTGCTCAGGTCTTAATATACAGCTCCTCCTCTGGAGTCAGGCTGGAGTTCAATAGTACTCATATTGCTTGCTGGTGATGTTTTTATATTGAGTTCATTCTTAATAAAATTAGCTAAGAAAGCTTGATGACCTATGCAATATGCATTATTCTCCTGCATAGTACAGTATTGCTGACATACCATAGAACAAGGTTTTGAATGATTTCAGTTGTTTAGAAATGCAGTTTCTTCTGCTCAGTGCAATttcttaaaaatgagtttatgGAGACAGTATTTGGAACAATGTGTACAAATGTAGATAAAATACCTTAACAATTTACATAGAAGGCTGTCTGTGTattttgtaatgtgtgtgtatatataaaaataatttgagaatttaaaagaaataaaaacaactgcTATCAGACATTTAGGAGTATTTCAATTCAGTAATGGGTGACTCCAACCCTGGAGAGCCGCAGCACTGCACaattcagtgtttgtttttttcattctaCCCTGGCTTGCCTGAATTACAATAGGCAATTTAAAGGCACCTTGATGATACAGTGTTAGGAAGACACTATTTATGCAGTGCTGCAGCCTTCTAGCCTGGAGATGACCACTTGTGGTTTACAATGAGCTGAAATTTACTTATATGCAAAGATAAGATTATGGTCACGTCATTTCAGATGAGAAACAATAGATTAAAGCACTTAAGAACTGTTGACCTCTGgagaaaaatacagttaaatggaatattttttttttgttgttggctAAGCGGAAAGGAACTCCACAAATTAAGCCAACAGGCCTCGTTAAAAGTGTGCTGGTGACATGTTAGGAAAAACCAACCACAAATATTAGAAATTAATTCACATGGACAAAGCTGTAACAGACAcgaatgtgaaaaaataaaaagacgcACTTGTGCACTGGAGAAATAAGGCTAAAAACATTCtcttgtctaaaaaaaaaagaggaaaatctCATAACTTAGCCTCCTTTCCACTTTTCGGCAAAAGTCTCTGCTTTAAAGAAGCACGTCTGCAGATGCACTGAAGACCCAGAAGGCATGTGAGGCAGGAGCAGTCAGGAGAGGGGGAAATGTTTGACTGACCGCCACCGTGCCCCTCTCTCAGTAGTTGTGTAAATGAGTGCCAGGGAATGAAAAAACAGGCTTGACCGCTGAGAATCAGAGCTGAGAATCTCCCAGATGGTTGAGCTCTTCCGTGTTTTTCTCCACCCCTCCGGCCGCTCGCTGGGAGAAACCGGCGGCGATCTCATCGAACGTCCGTCCCTTCGTCTCAGGAACTTTGAAGTATGTGAAGACGAAGAAGACCACTAACAGTATGGTGAAGATGATGAAGACGTATGGGCCACAAAGACGCTCCACATACTGGAAGCACATTCCCACAATAAAGTTGGCCGTCCAGTTGGAGAATCCGGCCACGGCGAAAGCGGAAGGACGGGGGCCTTGACTGAACAGCTCAGCCACAATGAACCAAGGGATTGGACCTGGTCCGATTTCGAAGAAAGCCACAAAAGCGAAAATAGCAACAATGCTCACGTAGGACATCCATTCCAACtggttCAGCAGTGCTAGGGCTATTGTCATCAGAATAGCTGATCCAGCCATGCCCAGCAGTCCTATTAAGTGTAGAGACCTGCGTCCGGCTCTCTCCACTAAAAACAACTTTCCTTGAGATCTTGTTCTTTTCTCGTTACCCATTGTTCCCAGTCCCCCTCT
>TU155180
TTAGGTAATAACAAGCTCACCCCGTGATTTAGATTtcgatttttttgtgtgtgagtttgttttctgtttcacAGAGTGCTCAAACAGATTTACAGCATTACACTCCAGTGCAATTATATATGGTCTTATTCAGATACAAATCATCTGTAACaaatatatagagagatttatatatatacttttatataacaGCAAAATATAGGTTTGACTTTGGTGGCAACACTCTATTCTGATGTAATACAGTGCTTTACATGTGCAAGAGGAAACAATACAcaatatcacacacactcatgcacactCACTTCTACACCCACACTCATCCGTGCACACAAACACTAATCTCTATCTACTTCGGCTCCCAACTCTCTGTGGAATGCTTTGGGGTGATGGATTTGCTAATGAGTATGAAAGTCCCCCAAACACGCACCCCCTGATTTCACAAAAGCCATGTGTCCTTGAAACTGGCCACGCAAGATCTGATAATGAATTCAGAACTCATTATGAGTCATCTTTTATCATGCCTGAAACGATACGCATCAAAAATAATGAGCGTTAGAAGGTCGGGGATGGGTGTGCACAGTTGCGTGTGATGACAGGCAAAAAACGCTGCCGCTGTATTTCAGTCTTTCTTCTGTAAAAGTGGGGATTTGGGTTTTTTTGCTTTGTAAAACATCTATGAGGCTCTATCTGGTGGGATTTTGGAAGATTACAGAAGTGATATGTGTGATGATAAAGTGCAGCAGAAAAGAGCAAACAGCAGAGTTCCTGCAGCAGGTACTACTTAAACCCCCTactgacagagagaaagggaagagTGGTGTCTGCATAGTAATGTGCTGTCTGGATTTGGATACGCACTCATAGCGGATGTCTGCAGCATACGAATACATCCAGTGATATTCTGGATGAttcgaaaaaaatatatattgcgtAATATTATGTAACCAAAATCCAACATCTTCCAAATGTCACATGCCAACATCGTATTGATGTATTTTACCAACAATTAGTTGTAAGGCATTGTGATCAAATCCAACATCTTCCAAATGTCACATGCCAACATCGTATTGATGTAATACACCAACATTTAGTTGTAAGGCATTGTGACGAAAACCCAACCTATTCCACATTTCATAATGTCACACCCACACATAGAGAAATTCTAACATTGTTGGAATGAAGTTTTTTGGTCATGGTGTTAAGTGACCAAAATCTAACGTCTGTCTAATGTTaaaccctgatttttttttaaggattgtGATTTGGTTTCTGAGTTCCATCCAAAATTCAACATCTCTAGAATGTTTGGTTTTGACATCAATTCATTTGATTTTTAACTATAAATGTATCATCTTTCTGATGTTAGTCTCTGCCAAACTGACCTGCTGATTATGTGGCCAGCACGGTGCCTCAGAGTCCCTCTCTGACCTCAGGCCTGTAGTTTTGTGGTACAAAGGAAGACTAAATAATAAACACTCAGTTCTTCCAGACTGCTTTAGCAAACTGAGGTGTGCTGGGCGAGTCCTGCTCAGGTCTTAATATACAGCTCCTCCTCTGGAGTCAGGCTGGAGTTCAATAGTACTCATATTGCTTGCTGGTGATGTTTTTATATTGAGTTCATTCTTAATAAAATTAGCTAAGAAAGCTTGATGACCTATGCAATATGCATTATTCTCCTGCATAGTACAGTATTGCTGACATACCATAGAACAAGGTTTTGAATGATTTCAGTTGTTTAGAAATGCAGTTTCTTCTGCTCAGTGCAATttcttaaaaatgagtttatgGAGACAGTATTTGGAACAATGTGTACAAATGTAGATAAAATACCTTAACAATTTACATAGAAGGCTGTCTGTGTattttgtaatgtgtgtgtatatataaaaataatttgagaatttaaaagaaataaaaacaactgcTATCAGACATTTAGGAGTATTTCAATTCAGTAATGGGTGACTCCAACCCTGGAGAGCCGCAGCACTGCACaattcagtgtttgtttttttcattctaCCCTGGCTTGCCTGAATTACAATAGGCAATTTAAAGGCACCTTGATGATACAGTGTTAGGAAGACACTATTTATGCAGTGCTGCAGCCTTCTAGCCTGGAGATGACCACTTGTGGTTTACAATGAGCTGAAATTTACTTATATGCAAAGATAAGATTATGGTCACGTCATTTCAGATGAGAAACAATAGATTAAAGCACTTAAGAACTGTTGACCTCTGgagaaaaatacagttaaatggaatattttttttttgttgttggctAAGCGGAAAGGAACTCCACAAATTAAGCCAACAGGCCTCGTTAAAAGTGTGCTGGTGACATGTTAGGAAAAACCAACCACAAATATTAGAAATTAATTCACATGGACAAAGCTGTAACAGACAcgaatgtgaaaaaataaaaagacgcACTTGTGCACTGGAGAAATAAGGCTAAAAACATTCtcttgtctaaaaaaaaaagaggaaaatctCATAACTTAGCCTCCTTTCCACTTTTCGGCAAAAGTCTCTGCTTTAAAGAAGCACGTCTGCAGATGCACTGAAGACCCAGAAGGCATGTGAGGCAGGAGCAGTCAGGAGAGGGGGAAATGTTTGACTGACCGCCACCGTGCCCCTCTCTCAGTAGTTGTGTAAATGAGTGCCAGGGAATGAAAAAACAGGCTTGACCGCTGAGAATCAGAGCTGAGAATCTCCCAGATGGTTGAGCTCTTCCGTGTTTTTCTCCACCCCTCCGGCCGCTCGCTGGGAGAAACCGGCGGCGATCTCATCGAACGTCCGTCCCTTCGTCTCAGGAACTTTGAAGTATGTGAAGACGAAGAAGACCACTAACAGTATGGTGAAGATGATGAAGACGTATGGGCCACAAAGACGCTCCACATACTGGAAGCACATTCCCACAATAAAGTTGGCCGTCCAGTTGGAGAATCCGGCCACGGCGAAAGCGGAAGGACGGGGGCCTTGACTGAACAGCTCAGCCACAATGAACCAAGGGATTGGACCTGGTCCGATTTCGAAGAAAGCCACAAAAGCGAAAATAGCAACAATGCTCACGTAGGACATCCATTCCAACtggttCAGCAGTGCTAGGGCTATTGTCATCAGAATAGCTGATCCAGCCATGCCCAGCAGTCCTATTAAGTGTAGAGACCTGCGTCCGGCTCTCTCCACTAAAAACAACTTTCCTTGAGATCTTGTTCTTTTCTCGTTACCCATTGTTCCCAGTCCCCCTCT

Function

NR:

description
solute carrier family 2, facilitated glucose transporter member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155179 True 3425 lncRNA 0.40 6 31110333 31114539
TU155180 False 3258 lncRNA 0.41 6 31110333 31114539

Neighbor

gene id symbol gene type direction distance location
padi2 padi2,LOC100380857 coding upstream 179116 30907329 ~ 30931217 (+)
LOC103038582 NA coding upstream 535641 30534127 ~ 30574692 (+)
LOC103041068 NA coding upstream 1160372 29924349 ~ 29949961 (+)
LOC103040768 LOC103040768,LOC108427541 coding upstream 1192580 29899564 ~ 29917753 (+)
LOC103032161 LOC108427567 coding upstream 1381996 29712485 ~ 29728337 (+)
LOC103036390 LOC108427585,LOC108272160,LOC107655778,LOC107708163 coding downstream 70928 31185467 ~ 31231831 (+)
LOC103036086 LOC103036086 coding downstream 119644 31234183 ~ 31263040 (+)
LOC103029625 LOC107708099,LOC108271793,LOC107655781,LOC107666178,LOC107549309,LOC107729733,LOC107569802 coding downstream 155486 31270025 ~ 31284839 (+)
LOC103034927 LOC108427590 coding downstream 218006 31332545 ~ 31349914 (+)
LOC103034279 si:dkey-238f9.1,LOC107729782,LOC103034279,LOC108427543,LOC108271548,LOC107666167,LOC107567673,LOC106582736,LOC106517667 coding downstream 302614 31417153 ~ 31569856 (+)
G114754 NA non-coding upstream 458283 30651006 ~ 30652050 (+)
G114752 NA non-coding upstream 472977 30626573 ~ 30637356 (+)
G114751 NA non-coding upstream 484903 30621974 ~ 30625430 (+)
G114745 NA non-coding upstream 489274 30609226 ~ 30621059 (+)
LOC111193762 NA non-coding upstream 506824 30590356 ~ 30603509 (+)
G114910 NA non-coding downstream 199196 31313735 ~ 31314348 (+)
G114911 capza1,LOC103046653,LOC107655783,LOC105908306,LOC107666111,LOC106582739,LOC108271791 non-coding downstream 199917 31314456 ~ 31329476 (+)
G114955 NA non-coding downstream 291757 31406296 ~ 31406563 (+)
G114978 NA non-coding downstream 483160 31597699 ~ 31597930 (+)
G114979 NA non-coding downstream 503234 31617773 ~ 31618350 (+)
G114841 NA other upstream 229780 30850309 ~ 30880553 (+)
G114698 NA other upstream 980437 30126335 ~ 30129896 (+)
LOC111193669 NA other upstream 1222355 29882371 ~ 29887978 (+)
LOC103044650 LOC108427558 other upstream 1829022 29207743 ~ 29281311 (+)
LOC103037845 necab3,LOC108431835,LOC108271560,LOC107666033,LOC107553901,LOC107740282,LOC107587636,LOC107744391 other upstream 3620811 27391014 ~ 27489522 (+)
G115024 ngf,LOC103031633,LOC105909845 other downstream 778746 31893285 ~ 31894351 (+)
LOC103031324 kcna3a,LOC108427600,LOC108271529,LOC107729772,LOC107666172,LOC107708155,LOC107554199,LOC107685799 other downstream 838475 31953014 ~ 31962885 (+)
LOC103027407 prkag1,LOC107708574,LOC107686771,LOC107752861,LOC107690822,LOC107554882,LOC107582314 other downstream 1014766 32129305 ~ 32143822 (+)
LOC103025619 LOC103025619,LOC108427613,LOC108272187,LOC104930301,LOC103373509,LOC100704252,LOC104955611 other downstream 1130727 32245266 ~ 32320655 (+)
G115133 NA other downstream 1495910 32610449 ~ 32611203 (+)

Expression


Co-expression Network