G115133


Basic Information

Item Value
gene id G115133
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 32610449 ~ 32611203 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU155511
ttatttaaatgccctttttatgccttgtgttttttcaatttaagaacTGAAGTTGTTTCACCAAATGCCCACTAGAGTGCAGCAAGACACCACATAAAACCTGATGAACACTACAGCTCAATTTATCAATGCTTTTCAACTAGTTTACTCACACCACTCATCTAGCATTgtcattatggtctttatggtcacgctggttacccagcttggttatgctggccatccagcttggtcatgctggtcattcacattggtcattatggtcctgctggtcattcagctttgtcatCATAGtaatgctggtcatccagcttggtcatactggccaaccacctttgccatgctggtcatccagtttggtgatGCCGGTCAACCAGCAACATGTTTTAAGCCTAACTGGCCTCCAGGGGCCTCTTTGCCTGTAACGCTCGAACCCCGTAaatcgccgcttgcggctatattta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155511 True 464 TUCP 0.45 2 32610449 32611203

Neighbor

gene id symbol gene type direction distance location
LOC111193763 NA coding upstream 4717 32604957 ~ 32605732 (+)
zxdc NA coding upstream 9614 32591860 ~ 32600835 (+)
cpne9 cpne9,LOC106583634 coding upstream 20935 32450736 ~ 32589514 (+)
mtmr14 mtmr14,LOC106583633,LOC107716897 coding upstream 162313 32428981 ~ 32448136 (+)
setd5 setd5 coding upstream 254011 32324062 ~ 32356438 (+)
LOC103022786 LOC108427618 coding downstream 20056 32631259 ~ 32644784 (+)
LOC103022276 LOC103022276,LOC108272091,LOC108427619,LOC105901876,LOC101480024,LOC100704523,LOC107586352 coding downstream 99303 32710506 ~ 32728257 (+)
LOC103021538 NA coding downstream 118136 32729339 ~ 32746968 (+)
LOC103045271 myl9,LOC103045271,LOC103386121,LOC100697131,LOC106565219 coding downstream 786805 33398008 ~ 33407467 (+)
LOC103044965 NA coding downstream 1064854 33676057 ~ 33726617 (+)
G115127 NA non-coding upstream 584 32577378 ~ 32609865 (+)
G115106 NA non-coding upstream 316508 32292488 ~ 32293941 (+)
G115093 NA non-coding upstream 443397 32156019 ~ 32167052 (+)
G115030 NA non-coding upstream 678317 31931758 ~ 31932132 (+)
G115029 NA non-coding upstream 680072 31930088 ~ 31930377 (+)
G115137 NA non-coding downstream 4760 32615963 ~ 32618034 (+)
G115145 NA non-coding downstream 85101 32696304 ~ 32696897 (+)
G115278 txnrd3,txnrd1,LOC107705897,LOC107705821,LOC106565239 non-coding downstream 174679 32785882 ~ 32795500 (+)
G115288 NA non-coding downstream 189696 32800899 ~ 32801184 (+)
G115347 NA non-coding downstream 742129 33353332 ~ 33357929 (+)
LOC103025619 LOC103025619,LOC108427613,LOC108272187,LOC104930301,LOC103373509,LOC100704252,LOC104955611 other upstream 289794 32245266 ~ 32320655 (+)
LOC103027407 prkag1,LOC107708574,LOC107686771,LOC107752861,LOC107690822,LOC107554882,LOC107582314 other upstream 466627 32129305 ~ 32143822 (+)
LOC103031324 kcna3a,LOC108427600,LOC108271529,LOC107729772,LOC107666172,LOC107708155,LOC107554199,LOC107685799 other upstream 647564 31953014 ~ 31962885 (+)
G115024 ngf,LOC103031633,LOC105909845 other upstream 716098 31893285 ~ 31894351 (+)
G114841 NA other upstream 1729896 30850309 ~ 30880553 (+)
G115510 grm7,LOC108271537,LOC107668159,LOC107708172,LOC107569297,LOC108427575 other downstream 1484714 34095917 ~ 34096865 (+)
rbm38 rbm38,LOC103039930,LOC108436278 other downstream 1719795 34330998 ~ 34340744 (+)
LOC103038162 NA other downstream 1769094 34380297 ~ 34391959 (+)
G115736 NA other downstream 2309498 34920701 ~ 35008942 (+)
LOC111193767 NA other downstream 2445947 35057150 ~ 35130073 (+)

Expression


Co-expression Network