G115510 (grm7,LOC108271537,LOC107668159,LOC107708172,LOC107569297,LOC108427575)


Basic Information

Item Value
gene id G115510
gene name grm7,LOC108271537,LOC107668159,LOC107708172,LOC107569297,LOC108427575
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 34095917 ~ 34096865 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU156039
CTTAAACAAACGGAGGATGTTCGCCACCATGATGGACACAGAGTTGGAGGAAGCGCCGATGACACCTACGACTCTCTCAGGCTTGGTGATGGTGGGTTTCCCCTCACCTGGACATTTCACGTCCATCCCATCCTTTTCTATGAGCGCCTGGACGAAAGTGAGAGACTGCTCCAGGGCGTGAGTGTCTCGTGAGCAGGTGTCCAGAATACGGGCTCCCAGTGTGATGTTGGGGAGCAGCTCGTGGTCATTGTTTATGCGGTCCAGAGCGAAGAGCATGGCCTCCAGGCGTTGGACTCCTTTCTCCTTCTTCAGCTCCCCACAGGGCTTTCCTCCATGGCCTCGCGCATGGACTGGGAACAGTCCTCCGAGGGTAATGTCTCCATCAATGCGAATGGAGTTAAGATACACTTGGCTGGGTCCTTTGGGTTTCGCTGCCAATGtggacaggaaaaaaaagagaaaaaccaGCAGAAAACATACACCACATTTGGTCCATCTAACTCCACTTGACCAAGGTGGAGACATGGCAGCAGCTCAGATCTTATCCAGTTATGGATAAGGAAAAAGGTTTCGCTTCAAGAAGGTGATCAAATATTGGCAACTTTCAAGACTGTAGAATcatcttatttgttttagtttttcaatATATCAAGATGAAGTGACTTGCACTTTTGCCCTTCTTAGAAATAGTCACATACGACTCCATTGTCTTTCTAGTCCATGAATATTCCTCTCAATATTCTTCTCAGGGTGATTCAGACAAGTTAATCAAAAGTATTTCCCTCCCTCAGGTTTTtcaatctctccctctctgagGGGTAGGCTGGAGGTCAGTCCGCAAGGCCACAGCGCTTTGCCCACCTCAGTGATGTCCTGCAAAACATAATGATAAAAAGGAATGAGTCACAAAGGGAGTGAAGAGTGGAAGACACGCCTGGATCGGTTGGCG

Function

symbol description
grm7 Enables several functions, including adenylate cyclase inhibitor activity; amino acid binding activity; and group III metabotropic glutamate receptor activity. Involved in several processes, including adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway; axon development; and sensory perception of sound. Located in cell cortex; dendrite; and plasma membrane. Is integral component of membrane. Part of receptor complex.

NR:

description
PREDICTED: metabotropic glutamate receptor 7 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156039 True 949 TUCP 0.48 1 34095917 34096865

Neighbor

gene id symbol gene type direction distance location
LOC103044649 LOC108427633,LOC108271939 coding upstream 328833 33730438 ~ 33767084 (+)
LOC103044965 NA coding upstream 369300 33676057 ~ 33726617 (+)
LOC103045271 myl9,LOC103045271,LOC103386121,LOC100697131,LOC106565219 coding upstream 688450 33398008 ~ 33407467 (+)
LOC103021538 NA coding upstream 1348949 32729339 ~ 32746968 (+)
LOC103022276 LOC103022276,LOC108272091,LOC108427619,LOC105901876,LOC101480024,LOC100704523,LOC107586352 coding upstream 1367660 32710506 ~ 32728257 (+)
thumpd3 thumpd3 coding downstream 120287 34217152 ~ 34225638 (+)
LOC103027408 LOC108436255,LOC108271893 coding downstream 130478 34227343 ~ 34244865 (+)
LOC103041067 LOC108436281,LOC108271998,LOC105904609,LOC106565586 coding downstream 150066 34246931 ~ 34316726 (+)
rae1 rae1 coding downstream 225087 34321952 ~ 34328462 (+)
LOC103039118 NA coding downstream 264752 34361617 ~ 34367615 (+)
G115443 NA non-coding upstream 426942 33668724 ~ 33668975 (+)
G115374 LOC108427631 non-coding upstream 626749 33440835 ~ 33469168 (+)
G115349 NA non-coding upstream 669052 33423676 ~ 33426865 (+)
G115372 NA non-coding upstream 672322 33421932 ~ 33423595 (+)
G115350 tpra1,LOC107666698 non-coding upstream 732879 33360137 ~ 33363038 (+)
G115511 NA non-coding downstream 16731 34113596 ~ 34114278 (+)
G115512 NA non-coding downstream 19533 34116398 ~ 34116826 (+)
G115557 NA non-coding downstream 113253 34210118 ~ 34210874 (+)
trnaf-gaa_1 NA non-coding downstream 330603 34427468 ~ 34427540 (+)
G115614 NA non-coding downstream 575988 34672853 ~ 34686380 (+)
G115133 NA other upstream 1484714 32610449 ~ 32611203 (+)
LOC103025619 LOC103025619,LOC108427613,LOC108272187,LOC104930301,LOC103373509,LOC100704252,LOC104955611 other upstream 1775262 32245266 ~ 32320655 (+)
LOC103027407 prkag1,LOC107708574,LOC107686771,LOC107752861,LOC107690822,LOC107554882,LOC107582314 other upstream 1952095 32129305 ~ 32143822 (+)
LOC103031324 kcna3a,LOC108427600,LOC108271529,LOC107729772,LOC107666172,LOC107708155,LOC107554199,LOC107685799 other upstream 2133032 31953014 ~ 31962885 (+)
G115024 ngf,LOC103031633,LOC105909845 other upstream 2201566 31893285 ~ 31894351 (+)
rbm38 rbm38,LOC103039930,LOC108436278 other downstream 234133 34330998 ~ 34340744 (+)
LOC103038162 NA other downstream 283432 34380297 ~ 34391959 (+)
G115736 NA other downstream 823836 34920701 ~ 35008942 (+)
LOC111193767 NA other downstream 960285 35057150 ~ 35130073 (+)
LOC103023619 cadps,LOC106953609 other downstream 1193963 35290828 ~ 35363640 (+)

Expression


Co-expression Network