G115736


Basic Information

Item Value
gene id G115736
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 34920701 ~ 35008942 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU156333
ttttattttaaaaacatatgtaCAAAACAGGTAACTACAACAAAGAAAATTACATACAGGTTgttgcataaaactgtgatcaTTACATAAAAGCTGCATGATGCATTTCAGAGTGAGTCCCACAGGTATTTTCCACTGAGTGCTGCATGAATGAATGAGTCCGGTTTCCGGTACACTGTCGATTACTCCTCAGAGACCTGCAGCCGTGCTTTAGCCTCTTGGATCGTTCCCCGGGATTCTGCTGATCGACACATCACTGAGGGCGGGGCTTGGTGACCTTGATGTAATTTCTATAATCTCATGATTGGTTACTTCCAGCGTTGTGGAAACCGCTTTCTGGGGCGTGTTCTGGACTGATGCAGGATCAGCTCCTGAACACGACGCCTCCACCGGCTTCTTCTCCTCTTCCTGCTTCATCTGAGTCCGTCTTGAAGTCTCCAAACGACCTCTGACTTGAGCGATGAGACGGGAAAATTCACTGCTGTGTTGTTTCCGGTAGTTAGAGTTCAATTGTTCAATCTCTTCAGCTGTCTGGTTCTTTGTGATGGGTATTGCAGGTTTACTTTTACTCCCCAGCTGATTTTTAGTCTTCTCATTGTTCTCAACCTCTCTAGCAATGTCTTCACCTGATCTGGGGTTGAGTGCGTCACACTGGGCGTTGAATATGTGGGTGAACTCCTGGTGTCGTCTGATGAGCTGCTCTCTGGAGCCCTGGGTGGACAGGTGGCAGTCTCGAAGTCGTCTCTTGAGCTCAGGGATAGTCATCAGTGTATACACCAGCTTAGACATCGGCCTACGCCTAGCAGAACTTCTGAGGCCCTCCTTCTTCTCATCTCTGCTCAAACAAGCATCCAGATGTTTATTGATGTGCTGTTGAGATATGGCCACTTCACACACTGGACACTCCACTTTGACAGTCGCCTTAGAAACCTGTGATGTGGAGGGAAAGGCAGACACATCCATCTTTTCCTCCTTCACTGTGGTGCTCTTAGCCTCCACCCTCTCCTGCTTGAGGTCTCTGGGGGGCTGCACGCACACCTCCATGGGTTCCTCCTTTACTGGGCAGGGAGGCATGAGGTCGGCTTTTGCCCCTGACGAGGGGGTCGCGGCGGTTCGTTTCTGGAAAAAGTGCGTCAGAGGGGTGCCCTCTTTCCTGGGGCACTTCTGTCTTGCTGCTTTGCCTTTCAAAGCCACAGAGGGGGTCTTGGGGGAAATCGGAGGAGACTCGAAATTTGCCCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156333 True 1240 TUCP 0.50 8 34920701 35008942

Neighbor

gene id symbol gene type direction distance location
cav3 cav3,LOC107749619,LOC107584510,LOC107750282 coding upstream 96992 34815978 ~ 34823709 (+)
LOC103023460 NA coding upstream 116420 34798245 ~ 34804281 (+)
LOC103034490 LOC108436251,LOC107658083,LOC107750281,LOC107584511,LOC107749617,LOC107567083,LOC107673479 coding upstream 140936 34777298 ~ 34779765 (+)
parp3 parp3,LOC107749614,LOC107673445 coding upstream 147766 34761583 ~ 34772935 (+)
LOC103035135 grm2,grm2a,LOC107657935,LOC107673619,LOC107567094 coding upstream 165398 34689863 ~ 34755303 (+)
hemk1 NA coding downstream 245154 35254096 ~ 35269371 (+)
LOC103022280 LOC103022280,LOC108436247,LOC108271634 coding downstream 453858 35462800 ~ 35471205 (+)
LOC103021651 slc6a13,LOC108413697,LOC107567077,LOC107721195,LOC107584422,LOC108271735 coding downstream 494114 35503056 ~ 35523915 (+)
LOC103046487 NA coding downstream 573481 35582423 ~ 35594235 (+)
trub2 trub2 coding downstream 607382 35616324 ~ 35620073 (+)
G115619 NA non-coding upstream 185774 34688232 ~ 34734927 (+)
G115614 NA non-coding upstream 234321 34672853 ~ 34686380 (+)
trnaf-gaa_1 NA non-coding upstream 493161 34427468 ~ 34427540 (+)
G115557 NA non-coding upstream 709827 34210118 ~ 34210874 (+)
G115512 NA non-coding upstream 803875 34116398 ~ 34116826 (+)
G115755 NA non-coding downstream 193975 35202917 ~ 35204176 (+)
G115757 NA non-coding downstream 228678 35237620 ~ 35238160 (+)
G115764 NA non-coding downstream 271667 35280609 ~ 35280927 (+)
G115765 NA non-coding downstream 279701 35288643 ~ 35289248 (+)
G115774 NA non-coding downstream 313020 35321962 ~ 35349945 (+)
LOC103038162 NA other upstream 528742 34380297 ~ 34391959 (+)
rbm38 rbm38,LOC103039930,LOC108436278 other upstream 579957 34330998 ~ 34340744 (+)
G115510 grm7,LOC108271537,LOC107668159,LOC107708172,LOC107569297,LOC108427575 other upstream 823836 34095917 ~ 34096865 (+)
G115133 NA other upstream 2309498 32610449 ~ 32611203 (+)
LOC103025619 LOC103025619,LOC108427613,LOC108272187,LOC104930301,LOC103373509,LOC100704252,LOC104955611 other upstream 2600046 32245266 ~ 32320655 (+)
LOC111193767 NA other downstream 48208 35057150 ~ 35130073 (+)
LOC103023619 cadps,LOC106953609 other downstream 281886 35290828 ~ 35363640 (+)
LOC103045376 LOC103045376,LOC107721197,LOC107584442,LOC107673487,LOC107712108,LOC107667402 other downstream 544659 35553601 ~ 35559726 (+)
G115917 NA other downstream 633932 35642874 ~ 35676035 (+)
G115931 NA other downstream 721437 35730379 ~ 35734359 (+)

Expression


Co-expression Network