tomm6


Basic Information

Item Value
gene id tomm6
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 35958543 ~ 35967878 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU156780
TTCTTCCCATTACACAAGGTCTAGCAGTGCAGCAGCAGCTAGCGTCCACCTTAAGATAACCTTATCTTATTTTCTATTCAATATATTTATCAGTAGTAATAGAAAATGAGTGGGGCAGGAAAGAAGCCTGAAGCGGCATCTCCAGGAATCGGTGGCTGGTTTAGCTCCGCTTGTCGGTTCGCGACAGACAGAAACGATTTCAGAcgGAATCTCTTAGTTAATCTAGGCTTGTTTGCAGCTGGAGTTTGGGTAGCAAGGAACCTGTCAGACTTTGACCTGATGTCTCCTCAACCAGGCACATAATTCCAACCTAATGAACACCAGGAGGCCATCAGGTTTACAGgAGGTGATTGACATTTCTTCTATTCAAGAATGAATCTTCGTAACAAACAGGACTGATAATAAATCACACTGAATGAGGATTGCATAACCAGAGGACTGTATTATTGCACAGTGAAACAACTGATTATTAGAAATGTCAAACTTTATTTAGAATATAAATAACAGTACAGgtttatattaaaacaattgTTTATGAACATGCTGTTTTTCACAATGTGGGATAAGGCCATCATTCAAGCAGGCTTGGTCATACACCTGATGTGCTCTTCTGTGAAGATAAAAGCTGGATCCAGGTTTCTCTTTCCAACCGTGTCTGAGCAGCAAGTATAATAGCAGTAGCAGTTTTTGAATGGTTCTGGGTGAGGCGAAGGAGAAAAGCTTCTGAAGGCAGCCCCAGCATTTGAGTCTTTAGCTCCTCTACACGAACATGAGCAGGGAATGTTGCATAGTCCTGCACGTTAAATCTCTGTCCATGTAATGTCTTGAGAGATAAGAGCAAGAGGTCATTGAAGAGATGCAGATAGAGATCAGTGCTCGACACTGTGGGGCCTGAGGTAAGATGACTCTTGACTGTCAATTTTTTTAGGCCTCCCGCTTGAATCAGATAACGCCCACTTATGATTAATGGTACTGACTTGACATTTCCAAAGTCCACTAGCTTCCCCAAAGAAACCAGCTCCTCTGTCCGTTTCATTCGCTGAACGCTGTTGTCACACTCCACCACTATCTCTCGCACAGCTTCGATTGCTTGCTTCAGGTAGGAAACATCAGCTGATCGCTCATCAGTTCTTTTGAGGATGTTCTCAAGAATAAGCTTTAATCTCGTAATCCTTTGGAAAGGAAGGACCAGGAAGGACTTGAGTGTCTGTCTCTGGCATACTGGATCCTTCTCCAGCTTCTTCACAGTCAAAGCAAACCTCTTGTTTTccaacAAAAGTTTTGCAATGAGGGCCTCCTGGTACATCATGTTGGTAACATAAGGCACATAGACTCGACGAAAAGCTGATCTATGATTCAGCACAATATCACCGACTTTAGACATCACCACATTCTGACCCAGCCTGGTCTCCAGATCGAGAAGGAATCCCTCACTGACCTTGCAGACCTCCTTCAGGTTGGAAAACAGTACATGGGTCTGTAAAGGAGGCAATGTGGCCTTCAGTTCTGTTGAGGACTGAAACAGCCCAACTGCCACTCGTAAACTCTTCTGATATGAGGTTTCAGACACGATCAGTTCAAATATCGCCTCTTGATGCCGAATGTCACTGGCTGGAAGTGAATGTAGCAAGCGTATCCTCTTCACCTCAGGCTGCTCCTGCCACAAGGCATATGGTGGAACATTTAGCCCTGGAGGGCTTGATACACTAGTTGGGCTGGAAGCTCGGGGAGAGGGCAGACCAGCAAGTCCCAGTGACACCACATCTGCCAGCCTTTTATGCTGCACTTTGTGAAGATCTGCCTTCATACATTTAATCCAATACTCCTGATACAGAGGtacagTTTTGATACATTTGGATTCATACTTCAGTTGAAAGGGTTCCTCTTTGGTTTCTTCCTGAGAATCTTCTGTGGACCGTTTGTCTTCAACTCGTCCACAGTCCTGAACAGGAGAGTCTGGTCGGCTGGGCAGGGCCTTCTGGTCCACTGTGGTGAAGAGAGGAGCAGTGTGGAGGAAAACATCCTGAAGACTCCAGGAGTCTGACCTAGCAACTGATCTCAGAGCTTCAGCAATCCCAGGAATAGCAcCATATTCTGGCGCTTGGCAAAGCTCCGTGTTTGTTTTAGCGTGATATCCATCCATCTTGGGCCGGGCAGATTCCCACACTACAGGGTTCTTGTTGTTGGCCTGCCCCGGGCTGTTTGTTGAAGACTTGTGTGTGTTCTCCTCGGGTGTGGCTCATTGATTGACATCACGTTATCCACTCCActccccccctccctccac
>TU156781
TTCTTCCCATTACACAAGGTCTAGCAGTGCAGCAGCAGCTAGCGTCCACCTTAAGATAACCTTATCTTATTTTCTATTCAATATATTTATCAGTAGTAATAGAAAATGAGTGGGGCAGGAAAGAAGCCTGAAGCGGCATCTCCAGGAATCGGTGGCTGGTTTAGCTCCGCTTGTCGGTTCGCGACAGACAGAAACGATTTCAGAcgGAATCTCTTAGTTAATCTAGGCTTGTTTGCAGCTGGAGTTTGGGTAGCAAGGAACCTGTCAGACTTTGACCTGATGTCTCCTCAACCAGGCACATAATTCCAACCTAATGAACACCAGGAGGCCATCAGGTTTACAGgAGGTGATTGACATTTCTTCTATTCAAGAATGAATCTTCGTAACAAACAGGACTGATAATAAATCACACTGAATGAGGATTGCATAACCAGAGGACTGTATTATTGCACAGTGAAACAACTGATTATTAGAAATGTCAAACTTTATTTAGAATATAAATAACAGTACAGgtttatattaaaacaattgTTTATGAACATGCTGTTTTTCACAATGTGGGATAAGGCCATCATTCAAGCAGGCTTGGTCATACACCTGATGTGCTCTTCTGTGAAGATAAAAGCTGGATCCAGGTTTCTCTTTCCAACCGTGTCTGAGCAGCAAGTATAATAGCAGTAGCAGTTTTTGAATGGTTCTGGGTGAGGCGAAGGAGAAAAGCTTCTGAAGGCAGCCCCAGCATTTGAGTCTTTAGCTCCTCTACACGAACATGAGCAGGGAATGTTGCATAGTCCTGCACGTTAAATCTCTGTCCATGTAATCTGCAGATAATATTTACACAAGTGATATGCATGTAACAGACAGGTGCAACAGCCCAGACACTAAATTGTAAATGCAAATTTTACACTGGactctatgtaaaaaaaagtttaaaaggaGTAAATtctatgaacattttttttcatagggaataaaaaaaatgcttttactgatatacttgcaaaACATGTTTGGG
>TU156782
TTCTTCCCATTACACAAGGTCTAGCAGTGCAGCAGCAGCTAGCGTCCACCTTAAGATAACCTTATCTTATTTTCTATTCAATATATTTATCAGTAGTAATAGAAAATGAGTGGGGCAGGAAAGAAGCCTGAAGCGGCATCTCCAGGAATCGGTGGCTGGTTTAGCTCCGCTTGTCGGTTCGCGACAGACAGAAACGATTTCAGAcgGAATCTCTTAGTTAATCTAGGCTTGTTTGCAGCTGGAGTTTGGGTAGCAAGGAACCTGTCAGACTTTGACCTGATGTCTCCTCAACCAGGCACATAATTCCAACCTAATGAACACCAGGAGGCCATCAGGTTTACAGgAGGTGATTGACATTTCTTCTATTCAAGAATGAATCTTCGTAACAAACAGGACTGATAATAAATCACACTGAATGAGGATTGCATAACCAGAGGACTGTATTATTGCACAGTGAAACAACTGATTATTAGAAATGTCAAACTTTATTTAGAATATAAATAACAGTACAGgtttatattaaaacaattgTTTATGAACATGCTGTTTTTCACAATGTGGGATAAGGCCATCATTCAAGCAGGCTTGGTCATACACCTGATGTGCTCTTCTGTGAAGATAAAAGCTGGATCCAGGTTTCTCTTTCCAACCGTGTCTGAGCAGCAAGTATAATAGCAGTAGCAGTTTTTGAATGGTTCTGGGTGAGGCGAAGGAGAAAAGCTTCTGAAGGCAGCCCCAGCATTTGAGTCTTTAGCTCCTCTACACGAACATGAGCAGGGAATGTTGCATAGTCCTGCACGTTAAATCTCTGTCCATGTAATGTCTTGAGAGATAAGAGCAAGAGGTCATTGAAGAGATGCAGATAGAGATCAGTGCTCGACACTGTGGGGCCTGAGGTAAGATGACTCTTGACTGTCAATTTTTTTAGGCCTCCCGCTTGAATCAGATAACGCCCACTTATGATTAATGGTACTGACTTGACATTTCCAAAGTCCACTAGCTTCCCCAAAGAAACCAGCTCCTCTGTCCGTTTCATTCGCTGAACGCTGTTGTCACACTCCACCACTATCTCTCGCACAGCTTCGATTGCTTGCTTCAGGTAGGAAACATCAGCTGATCGCTCATCAGTTCTTTTGAGGATGTTCTCAAGAATAAGCTTTAATCTCGTAATCCTTTGGAAAGGAAGGACCAGGAAGGACTTGAGTGTCTGTCTCTGGCATACTGGATCCTTCTCCAGCTTCTTCACAGTCAAAGCAAACCTCTTGTTTTccaacAAAAGTTTTGCAATGAGGGCCTCCTGGTACATCATGTTGGTAACATAAGGCACATAGACTCGACGAAAAGCTGATCTATGATTCAGCACAATATCACCGACTTTAGACATCACCACATTCTGACCCAGCCTGGTCTCCAGATCGAGAAGGAATCCCTCACTGACCTTGCAGACCTCCTTCAGGTTGGAAAACAGTACATGGGTCTGTAAAGGAGGCAATGTGGCCTTCAGTTCTGTTGAGGACTGAAACAGCCCAACTGCCACTCGTAAACTCTTCTGATATGAGGTTTCAGACACGATCAGTTCAAATATCGCCTCTTGATGCCGAATGTCACTGGCTGGAAGTGAATGTAGCAAGCGTATCCTCTTCACCTCAGGCTGCTCCTGCCACAAGGCATATGGTGGAACATTTAGCCCTGGAGGGCTTGATACACTAGTTGGGCTGGAAGCTCGGGGAGAGGGCAGACCAGCAAGTCCCAGTGACACCACATCTGCCAGCCTTTTATGCTGCACTTTGTGAAGATCTGCCTTCATACATTTAATCCAATACTCCTGATACAGAGGtacagTTTTGATACATTTGGATTCATACTTCAGTTGAAAGGGTTCCTCTTTGGTTTCTTCCTGAGAATCTTCTGTGGACCGTTTGTCTTCAACTCGTCCACAGTCCTGAACAGGAGAGTCTGGTCGGCTGGGCAGGGCCTTCTGGTCCACTGTGGTGAAGAGAGGAGCAGTGTGGAGGAAAACATCCTGAAGACTCCAGGAGTCTGACCTAGCAACTGATCTCAGAGCTTCAGCAATCCCAGGAATAGCAcCATATTCTGGCGCTTGGCAAAGCTCCGTGTTTGTTTTAGCGTGATATCCATCCATCTTGGGCCGGGCAGATTCCCACACTACAGGGTTCTTGTTGTTGGCCTGAAACAAACAGCAGGATTCACTACATAGTCACCGGGCAGTGGTGTGCCTTTACTCGTGTCCTTGTTTCAAAACGAAACAAACAATGCAGTTATCTTAAAAATCCATTGGTTGTAAGCAGTCACACTGGTTTCGCATGCAGTCCTGGCCTGAACAAACACAGGTTTATTGGCTGCTTCAGCGAGAACTCCGACTCTCAGCCTCATCACCGCGAACACGTGCAGACCAATCAGCTGTGAGTGCAGTTGTG
>XM_007254286.3
TATCAGTAGTAATAGAAAATGAGTGGGGCAGGAAAGAAGCCTGAAGCGGCATCTCCAGGAATCGGTGGCTGGTTTAGCTCCGCTTGTCGGTTCGCGACAGACAGAAACGATTTCAGAcgGAATCTCTTAGTTAATCTAGGCTTGTTTGCAGCTGGAGTTTGGGTAGCAAGGAACCTGTCAGACTTTGACCTGATGTCTCCTCAACCAGGCACATAATTCCAACCTAATGAACACCAGGAGGCCATCAGGTTTACAGgAGGTGATTGACATTTCTTCTATTCAAGAATGAATCTTCGTAACAAACAGGACTGATAATAAATCACACTGAATGAGGATTGCATAACCAGAGGACTGTATTATTGCACAGTGAAACAACTGATTATTAGAAATGTCAAACTTTATTTAGAATATAAATAACAGTACAGgtttatattaaaacaattgTTTATGAACATGCTGTTTTTCACAATGTGGGATAAGGCCATCATTCAAGCAGGCTTGGTCATACACCTGAAAGAACGGATGTACAAAAATGATGTATGCAAAACCCAATAAAATGTGTACTACCATCATGAAA

Function

NR:

description
PREDICTED: mitochondrial import receptor subunit TOM6 homolog

GO:

id name namespace
GO:0006935 chemotaxis biological_process
GO:0097485 neuron projection guidance biological_process
GO:0007411 axon guidance biological_process
GO:0042330 taxis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156780 False 2287 lncRNA 0.46 16 35958543 35967878
TU156781 False 1015 lncRNA 0.39 5 35958543 35962909
TU156782 True 2438 lncRNA 0.46 15 35958543 35967697
XM_007254286.3 False 577 mRNA 0.40 3 35958630 35961804

Neighbor

gene id symbol gene type direction distance location
tspo tspo,LOC107721166,LOC107568174,LOC107667354,LOC107584504 coding upstream 3001 35952041 ~ 35955542 (+)
ppil1 ppil1,LOC107667353 coding upstream 52525 35901223 ~ 35906018 (+)
LOC103033861 NA coding upstream 89111 35864138 ~ 35869432 (+)
LOC103035259 LOC103035259 coding upstream 97112 35858681 ~ 35861431 (+)
c13h1orf159 cunh1orf159,LOC103036790 coding upstream 104452 35849749 ~ 35854091 (+)
crbn crbn,LOC107711034,LOC107748399 coding downstream 71314 36039192 ~ 36046913 (+)
LOC103026553 vhl coding downstream 80019 36047897 ~ 36050402 (+)
tatdn2 NA coding downstream 82632 36050510 ~ 36056356 (+)
ccdc174 NA coding downstream 93587 36061465 ~ 36066292 (+)
LOC103028900 LOC108439894 coding downstream 99099 36066977 ~ 36075546 (+)
G116050 NA non-coding upstream 25337 35930924 ~ 35933206 (+)
LOC111193772 NA non-coding upstream 59150 35894947 ~ 35899393 (+)
G116020 NA non-coding upstream 95720 35862214 ~ 35862823 (+)
G115915 eif4enif1 non-coding upstream 281702 35676178 ~ 35676841 (+)
G115925 patz1 non-coding upstream 293666 35661443 ~ 35664877 (+)
G116105 LOC103030273,LOC108440644,LOC107712078,LOC107721176,LOC107673500 non-coding downstream 22155 35990033 ~ 36000056 (+)
G116138 NA non-coding downstream 221896 36189774 ~ 36223578 (+)
G116155 NA non-coding downstream 338472 36306350 ~ 36306762 (+)
G116255 NA non-coding downstream 448930 36416808 ~ 36462597 (+)
LOC111193778 NA non-coding downstream 533355 36501233 ~ 36503562 (+)
G115931 NA other upstream 224184 35730379 ~ 35734359 (+)
G115917 NA other upstream 282508 35642874 ~ 35676035 (+)
LOC103045376 LOC103045376,LOC107721197,LOC107584442,LOC107673487,LOC107712108,LOC107667402 other upstream 398817 35553601 ~ 35559726 (+)
LOC103023619 cadps,LOC106953609 other upstream 594903 35290828 ~ 35363640 (+)
LOC111193767 NA other upstream 828470 35057150 ~ 35130073 (+)
G116103 prkcda,LOC103030273,LOC108440644,LOC107582675,LOC107667398,LOC107721176,LOC107673500,LOC107712078,LOC108271968 other downstream 14241 35982119 ~ 35988060 (+)
LOC103024058 LOC103024058,LOC108440764,LOC107748389,LOC107711047,LOC107673509,LOC107585116,LOC106583201 other downstream 375107 36342985 ~ 36359777 (+)
LOC103044253 LOC108440873 other downstream 689514 36657392 ~ 36713884 (+)
LOC103045245 vdrb,LOC108272216,LOC107585146,LOC107673565,LOC107711077,LOC108441087 other downstream 1132136 37100014 ~ 37121327 (+)
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289 other downstream 1556973 37524851 ~ 37612322 (+)

Expression


Co-expression Network