G116155


Basic Information

Item Value
gene id G116155
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 36306350 ~ 36306762 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU156931
gctccaagaagcacgcggctgaggctccacgccccgtgactcccgtggctcagccgctccccgagacttcagcggcggccgcgccgctccccgagactacaGCGGcagcggcagcgccgctctctgaagctccagctaagctagctagcctgctagctccACCGCACTCTCCagctcggccggcttccagctctccagcccggccgacttccagcactccagctcgaccggcttccagctctccagcccggccgacttccagcactccagctcgaccg

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156931 True 278 lncRNA 0.70 2 36306350 36306762

Neighbor

gene id symbol gene type direction distance location
LOC103024783 ip6k2b,LOC103024783,LOC108440711,LOC107585112,LOC107673575,LOC107711042,LOC108272042,LOC107748392 coding upstream 14537 36287057 ~ 36291813 (+)
trnaf-gaa_2 NA coding upstream 57505 36248773 ~ 36248845 (+)
LOC103025322 LOC108439925,LOC100332423,LOC107748417,LOC107582687,LOC107667408,LOC107585110 coding upstream 62961 36231936 ~ 36243389 (+)
LOC111193774 col7a1 coding upstream 87378 36205672 ~ 36218972 (+)
col7a1 col7a1 coding upstream 110926 36129984 ~ 36195424 (+)
LOC103023094 sec61a1,LOC103023094,LOC102228108,LOC108440718,LOC107384934,LOC106518493 coding downstream 7505 36314267 ~ 36320030 (+)
uroc1 uroc1 coding downstream 15081 36321843 ~ 36330036 (+)
efcab12 NA coding downstream 23556 36330318 ~ 36335490 (+)
LOC103023734 NA coding downstream 28807 36335569 ~ 36340026 (+)
sumf1 sumf1,LOC107673603 coding downstream 121708 36428470 ~ 36433844 (+)
G116138 NA non-coding upstream 82772 36189774 ~ 36223578 (+)
G116105 LOC103030273,LOC108440644,LOC107712078,LOC107721176,LOC107673500 non-coding upstream 306294 35990033 ~ 36000056 (+)
G116050 NA non-coding upstream 373144 35930924 ~ 35933206 (+)
LOC111193772 NA non-coding upstream 406957 35894947 ~ 35899393 (+)
G116020 NA non-coding upstream 443527 35862214 ~ 35862823 (+)
G116255 NA non-coding downstream 110046 36416808 ~ 36462597 (+)
LOC111193778 NA non-coding downstream 194471 36501233 ~ 36503562 (+)
G116349 LOC108440912,LOC108439999 non-coding downstream 425386 36732148 ~ 36742014 (+)
G116359 NA non-coding downstream 516702 36823464 ~ 36831576 (+)
G116356 LOC103042096,LOC108440962 non-coding downstream 518532 36825294 ~ 36827868 (+)
G116103 prkcda,LOC103030273,LOC108440644,LOC107582675,LOC107667398,LOC107721176,LOC107673500,LOC107712078,LOC108271968 other upstream 318290 35982119 ~ 35988060 (+)
tomm6 NA other upstream 338472 35958543 ~ 35967878 (+)
G115931 NA other upstream 571991 35730379 ~ 35734359 (+)
G115917 NA other upstream 630315 35642874 ~ 35676035 (+)
LOC103045376 LOC103045376,LOC107721197,LOC107584442,LOC107673487,LOC107712108,LOC107667402 other upstream 746624 35553601 ~ 35559726 (+)
LOC103024058 LOC103024058,LOC108440764,LOC107748389,LOC107711047,LOC107673509,LOC107585116,LOC106583201 other downstream 36223 36342985 ~ 36359777 (+)
LOC103044253 LOC108440873 other downstream 350630 36657392 ~ 36713884 (+)
LOC103045245 vdrb,LOC108272216,LOC107585146,LOC107673565,LOC107711077,LOC108441087 other downstream 793252 37100014 ~ 37121327 (+)
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289 other downstream 1218089 37524851 ~ 37612322 (+)
LOC103036266 LOC108441345 other downstream 2083515 38390277 ~ 38394530 (+)

Expression


Co-expression Network