G117103


Basic Information

Item Value
gene id G117103
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 40038117 ~ 40038478 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU158151
cacagaattgcagacacgtgcagatactgataaaaatatatgtttattataaaataaacagatgtaaacgtagtcgatacagaaacaatgggtaatcaccagtaaacagagcaatgaaggcaaaaccataccataaacgagaaacagtccagagttcatacatgagatccaatatcagaggtaatccaagaggcagtagtgaaaacacagtccaggtaatacacaagcaatccagtatcagaggcaaaggcaataatcggcgtcgagaaaacaaaagcaaggtcatacacaagataaactgaagacaagagatatagaacgctttgtaatgaggagaacctacaatacgcggcgtgggtgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158151 True 362 lncRNA 0.39 1 40038117 40038478

Neighbor

gene id symbol gene type direction distance location
LOC111193786 NA coding downstream 755202 39271790 ~ 39282915 (-)
lnp1 lnp1 coding downstream 1012955 39013038 ~ 39025162 (-)
LOC103031712 tmem45a,LOC107685333 coding downstream 1026363 39002702 ~ 39011754 (-)
LOC103032030 zgc:110788,LOC108440097,LOC107711028,LOC107673477,LOC107726515,LOC107585211,LOC107580362 coding downstream 1037952 38996878 ~ 39000165 (-)
LOC111193785 NA coding downstream 1056972 38978736 ~ 38981145 (-)
uhmk1 uhmk1,LOC107692420 coding upstream 581004 40619482 ~ 40636689 (-)
LOC103034848 NA coding upstream 716870 40755348 ~ 40777657 (-)
LOC103032504 ap1m3,LOC108441657,LOC107724146,LOC107684323,LOC108271949,LOC107692442,LOC106528254 coding upstream 1186363 41224841 ~ 41249611 (-)
c13h1orf210 NA coding upstream 1212539 41251017 ~ 41260579 (-)
orc1 orc1,LOC107725193,LOC105913168,LOC104957406 coding upstream 1286244 41324722 ~ 41335529 (-)
G117100 NA non-coding downstream 9170 40005850 ~ 40028947 (-)
G117087 NA non-coding downstream 108701 39929042 ~ 39929416 (-)
G117065 NA non-coding downstream 301288 39736486 ~ 39736829 (-)
G117064 NA non-coding downstream 306351 39731565 ~ 39731766 (-)
G117059 NA non-coding downstream 380692 39657194 ~ 39657425 (-)
G117107 NA non-coding upstream 33118 40071596 ~ 40071917 (-)
G117115 NA non-coding upstream 90738 40129216 ~ 40136686 (-)
G117120 NA non-coding upstream 131359 40169837 ~ 40170205 (-)
G117207 NA non-coding upstream 299283 40337761 ~ 40340478 (-)
G117217 LOC103358909,LOC107711121,LOC107551033 non-coding upstream 379793 40418271 ~ 40512239 (-)
LOC103028549 NA other downstream 747089 39284217 ~ 39291028 (-)
LOC103032356 LOC108441420,LOC108272184,LOC107582737,LOC107726519 other downstream 1074423 38953162 ~ 38963694 (-)
negr1 negr1,LOC107673552,LOC107711106,LOC107726517,LOC107582736,LOC107585169,LOC107685309 other downstream 1138671 38630637 ~ 38899446 (-)
G116805 plcxd1,LOC103035541,LOC105895009,LOC107711026,LOC107673474,LOC108441321,LOC107585164 other downstream 1653519 38381270 ~ 38384598 (-)
tubgcp5 tubgcp5,chst7,LOC107585157,LOC107582726,LOC107673606,LOC107753407,LOC107582727 other downstream 1789493 38233474 ~ 38248624 (-)
LOC103040080 LOC108440156 other upstream 321841 40360319 ~ 40363960 (-)
LOC103034527 NA other upstream 692818 40731296 ~ 40769682 (-)
LOC103041916 LOC107758363,LOC107684070,LOC107692412 other upstream 777655 40816133 ~ 41017814 (-)

Expression


Co-expression Network