G117232 (nos1ap)



Basic Information


Item Value
gene id G117232
gene name nos1ap
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 40595052 ~ 40600261 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU158333
GAACATTTGAGGTTCCTCTAACTACATTTTAGTGCGCTTATAATAAACCCTTCATAAACAGGAGTCTTTCCTTCAGCAATTCTGTAATTCCTTCATTTCAGAACATTGTGAAAGTGACCAGACCACAGATAATTAAGCAGTTAACAAACTATGAAAATCactgtaataaaagaaaatacaatcaTTCTTTTTGTGATAAATTCCCATTATTTTACCACAGCTCTGTATAAAAATCATCTTCAAAACtacaataaactaaaatagaaatctcaatttttttttcattgattttttttgtccccaCCACATATACATAGCAGTCTTAAAAGGTATCATAAAATagatcataataataaaaataacttcaCATTTTATAACCCAATATAACATTACAATACAACAGTGAGTGGCCAGCATTAGTACAGCATTTATCTAATAGTGTTCATCATTTTCTCTATTTCTAGTGTTCAAATCTGCAGAGAACATCTGACAACTCATCCCATCCCATCCTGTTACAACACATTAGCTCTCATTAACAATGACATAACAATATGACAGTGATAAACACATGAAATGCAGGACATACATGATAAGATATTTGCCCTTAAGTTTAAGTGACATTTATAGAACATTTCCATTGTTATAATAATGTGCTTAAAATGAACAACACATCCCTTTGTTACTTTACCTTGAGCATTTCTCACTTACACTCATTACCCTGACCTGCACTTAACTGACATTCTGTTAACCCTCTTCTGACCTGCTGCAATTGCACAACCCTCTTCCTGTAAAACACCTGATAAAAGATAACTGAATATTGCATATTTCTTATAAAACTGTGAAATGAATGCTATTTGTGGCTATAGGCACAGTGTactgtacagtggcttgcagaTGTTTGGGAATCCTTGGTCAACATAGAATATTTGTTACTGTGAAAAAGTGAGTGAGTAGACGATTCATGCAAAGAACGCCcttccaactgttaagcatgggggtgggtgCATTATGACTTTTGATTTATACTGCAGCCAGTAGCAGGGGAAATTAATTTAACTAGCAGCAAAATCTCTAAAAAGCAAACACTCCTCTGTTTGTTAAAGATTTTACCATGATCCTTAGTACTGCAACCTAAACATGATCGAAAAAAGATGACCAGGTGATTTATTTAGTGCTGAGCATGCAGAGTGCTTAGTCTTTATCTTtgggctttttttcttttgaaatggtaaaaaatgaaatctgtgaCTTTTGGGACTTTTTTGGAAATCAAGTTAcgttttatttactttagttGTTCATATTGTTCACAATGTCTACATAATTTCTATATAATATCTATATAATTTGTGAAACTACACATTTTGTTGAGATAATATTCCTTGAACgcagtctattttgtatttgttttgcaattTACTGTGATGTTTTATGGGTATATTTTattgttttgtttctactgaatgtttgaaactAATCTACTGGTACTACATATGTTGCAGTACTAAGTTTTTGAAATTagtaagtaaaaatatatatatttttcaacattttgcCATATTGTCAAcaatatcgttatcacaaaaataacctaaaatattgttatattattaggGTCATATCGCTCACCCCTAATTCACAGTAACAGAGATTTTACCTAAGGATGCCTGCACTTTTTTGTGCACcactttttatgtatatatgatCTTGAAGTGCGTCTGAAAGACAAAAATTAGTTCAACACTGAAAGCATCTCTTGAGGGTTTGGGGAATCAGTAGCTGCCTCTGAAGACAAGAGGTCAGCTGAGATTCGTGCAGAGTTCCGACATTCCTCGGCTACTCCGAGCCTGTTCTCATACCTTTCCGCTGACGGACGCCTCATTAGTGCCATTTCACAAGCCTGCCATCACTTTAACGATTATTGCCATGACAAACCCACAGCCACTGTAAGATCCTATAAACTCGGTCATGCAAAACCAGTTCTAACGGTGCCAAAAAACCTGCTCTGAGCCTTCTATTCCAGTGCTGCCTTACCTAGTGTGCCTCAAAAATGACTGAAACAGAGATTCTTCTTTCCAGTTATTAATTTTCATTAGAGTCACAATACACTGAATATTCATACTGAGTAATTTAATtactaagggcgttttcacaccagcacattTTATTCTGGTTTATGTGAACTCAGAATTAGTTTGGAcaggtgtgaatacagtaaatgcacttggatgtgtaatttgtttggtcaggtgtgaatacagtaattGTATTTGGATGTGGACCAACACAACCACACTGAGACCCTTGACAGGAAGTGATCTCAGTCTGGTTTCAAACTAACTCTGGAGAAGTGTGTTTGAGTTGAGGAGAATGTGATCTGGCCTCAGTTTGACCCATCTCTATTATTGCTGTGTTAAACTGAACAGAAATAGGCCCTAGTCCAGAGCACAGGACATTTTTCCTGTATTTCTTGCTCCTGCCCCAGACAGATCTGACCAATAGGAGGAGAGAACATTCTCACGTTTGTtgtatttttctatGCTTcaaacactaggagggtgaggGCTAGCAAATGTCtcctcagatacatgtgaagccagacactcactttttttttttaaactgtcgCCAATGCAGCAACACTAGGCAGCCATCTACCATAAGGCCAATGCCAGCACcattcccagctctgatacatatGCCAACAGAAGCCTGTTCTAGCTAAACCATAACAGAAGTGATGAACTTGTGATTTGAACTCGTGATTCTTGAGCCAGCATCCTAAGCCCCCTTTCAATACAGCAACTGAAATCCAGAACTTTTCTAGATTTATCTAGAGCGGTGGCATGTGTGAACGCAAATGTTGGTGTTAACTGCTTTGGACATCGTCCAGATCTCTTTCTGGTAGTTCCCTAACAAAATTTGAGGATCATGTCTGAGTGAGCTCATGCATGTGTGAATAGAGCAGGGAATGTTCCAGAAAATTTATTGTGGGTATGAGTCAAAGTTCTTCAAAACATCATCTcagggcaccgagtggtccagcgctcTAAAGAGCTGCCAAttgtgatcgggagatcgctggtttgaatcctggtcatgcagcttgtcatcagctgccggagccctgagagagcacaactgagAGAGCATGGCTCTCTCTGGGGGgctagatggcactctttcccttcatcactcctagggtgatgttgatcagcataagacgtctgtgagctgatgtatcggaactgagtcactgcgcttttctccgagtgtgctggctagctactcggcaatgcttaATCCTTTCCATTCTACCCCTAATATTGtggatttaaacattttgttgtttgttgttgtacTCGTACAAAGTCAAGACCTGATTCTCCAGATATTTTCTGAAGTGTATGTGTGGATAAGGGTTTAGTCTGTTGTGACACACAGCCTCAAgtgtgctggattttttttcttttccttggtgtgaaaaacaaaaagaaaaaaaaaaacgcaccaAGTTTACAAgctcattaactgattcagaccattGCAAACTGACTATTGGCGTGAAAACACCCTAATACCCAGTACATTATACAGACTCCATGTCAGTATATTGTTCAGGTTGTTTGACTCTTTCAAAAGCGTAAAGACCTTAACAAAGCCTTCTCTACCCTTCAGGAATTCAGCCCCTACATTCCTCATGTGTCCTTCTAATTCCTCCCGCATGTTCTGCCTGACTGCGAATGCATAGGCCTCCGTCAAATTAAACagtcaaaacacaaaacaaagcgCCACCATCAGCTATTTTATGCTTTACCAGGCTTAGCCCGGGGTTGGAGGCTTACTCCTATAGCTGGTGATGGGAATTTCTGGGAGAAGCTGAGCTTGTAGTTTTGACGGAAGCAAACTTTGGTGTGAAACAACGTATCCAATACAGGAAAGCTGCCTGCAGAGGgtatgtgatgtgatgtgatgtacGTGAACAGATTCAGAGGTATTACAACATAGGAAATGTGCTTTGTTTTGGCTTTGGTTTCTATTGACGAGCTGGCAGTTTCAATTCTTTAgcataaaacatgtaaaactaaTACGATTTAAAGCTAAAATACACAACTGACGGTAATAATACGTGATTGAACAAATCTAAAGTagtgattttttgttttctaagaAATTAGAtctgtaaaatataatttaaaaatacatctgTAGTAGAGATAAGCTATAAAACTGAGCATAATAAAGATGTTATAGTGCATACACAGGAAATATAGACTGGTTCATAGAAAGATCAGAAAGACAAAGCCATGTAGCATGTTGCTTGGTTCCCTCATAGAACACCTATGGAAACCTGTAGAATTGTGCACCATCAGCACCAGCACATCAGAATAACCTCAGTTGGGGGTTGCTTGAGAATGACTTTCCACTGATGATGCTGGTGCTGTCCTCAGCATGATAAGACTTACTACTACTCAAATGAAAGCAGGTCTGGGTGTGGTTCCTCGTTCTCCATGTTGGAGCTTCTCCTGGAGCTTTTATAGTCCACTGAACCGTTTTCCAGGAGCTCCCCCTCGCTCAGGCTGATGCGACAGCCTCCTTTCCCCGGGCAAGGTGTGGAGGCCATTCTAGACTCCATACTGTTCAGTTTTTGTTTCAGCTCCAGGTTATCCTTGTGAATGAGGTCAGGAACGGAGCGCAGCACCTGAGACTGGTCTTCTTTCGCAGCGTCAAGCTCCTTCAGCCCGTCTGCCATCTGCACAGCATCTGTACTGCCACACTGCCCTTTCACCTCTGCTGATCCACTCTCCTCCTTTATCTGGATCTCCAGAGGCGTGCTGGCTGCTGAAGGTGTCTCTGGCTCCAGGCCTGGCTCTTCGAGGCAGGGCTGGAATTGATCCTGGGCCTTGCTTGATGATATGAGgcagctcttatctggggaggaCAGGAGGGAGGAGTCGGAGACCTCTGGGGAGGCTACCACTGGGTCAGATGAGATCATCATGTCCTGAGTGGTCTTTAAAGCTCGAGGAAGCCGCTTCTTGCTGGTGGGAGGTGGAGGATCCAGGCGCGGGAAGGAGTCCAAAG

Function


symbol description
nos1ap Predicted to enable nitric-oxide synthase binding activity. Involved in postsynaptic actin cytoskeleton organization; regulation of heart rate by chemical signal; and regulation of ventricular cardiac muscle cell membrane repolarization. Is active in glutamatergic synapse. Implicated in nephrotic syndrome type 22.

NR:

description
PREDICTED: carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU158333 True 5085 lncRNA 0.40 3 40595052 40600261

Neighbor


gene id symbol gene type direction distance location
LOC111193786 NA coding downstream 1312137 39271790 ~ 39282915 (-)
lnp1 lnp1 coding downstream 1569890 39013038 ~ 39025162 (-)
LOC103031712 tmem45a,LOC107685333 coding downstream 1583298 39002702 ~ 39011754 (-)
LOC103032030 zgc:110788,LOC108440097,LOC107711028,LOC107673477,LOC107726515,LOC107585211,LOC107580362 coding downstream 1594887 38996878 ~ 39000165 (-)
LOC111193785 NA coding downstream 1613907 38978736 ~ 38981145 (-)
uhmk1 uhmk1,LOC107692420 coding upstream 19221 40619482 ~ 40636689 (-)
LOC103034848 NA coding upstream 155087 40755348 ~ 40777657 (-)
LOC103032504 ap1m3,LOC108441657,LOC107724146,LOC107684323,LOC108271949,LOC107692442,LOC106528254 coding upstream 624580 41224841 ~ 41249611 (-)
c13h1orf210 NA coding upstream 650756 41251017 ~ 41260579 (-)
orc1 orc1,LOC107725193,LOC105913168,LOC104957406 coding upstream 724461 41324722 ~ 41335529 (-)
G117217 LOC103358909,LOC107711121,LOC107551033 non-coding downstream 82813 40418271 ~ 40512239 (-)
G117207 NA non-coding downstream 254574 40337761 ~ 40340478 (-)
G117120 NA non-coding downstream 424847 40169837 ~ 40170205 (-)
G117115 NA non-coding downstream 458366 40129216 ~ 40136686 (-)
G117107 NA non-coding downstream 523135 40071596 ~ 40071917 (-)
G117235 NA non-coding upstream 13938 40614199 ~ 40614416 (-)
G117223 NA non-coding upstream 24076 40624337 ~ 40626142 (-)
G117239 uap1,LOC107551035 non-coding upstream 42687 40642948 ~ 40650103 (-)
G117240 NA non-coding upstream 52790 40653051 ~ 40653775 (-)
G117253 NA non-coding upstream 107521 40707782 ~ 40709792 (-)
LOC103040080 LOC108440156 other downstream 231092 40360319 ~ 40363960 (-)
LOC103028549 NA other downstream 1304024 39284217 ~ 39291028 (-)
LOC103032356 LOC108441420,LOC108272184,LOC107582737,LOC107726519 other downstream 1631358 38953162 ~ 38963694 (-)
negr1 negr1,LOC107673552,LOC107711106,LOC107726517,LOC107582736,LOC107585169,LOC107685309 other downstream 1695606 38630637 ~ 38899446 (-)
G116805 plcxd1,LOC103035541,LOC105895009,LOC107711026,LOC107673474,LOC108441321,LOC107585164 other downstream 2210454 38381270 ~ 38384598 (-)
LOC103034527 NA other upstream 131035 40731296 ~ 40769682 (-)
LOC103041916 LOC107758363,LOC107684070,LOC107692412 other upstream 215872 40816133 ~ 41017814 (-)

Expression



Co-expression Network