G117811


Basic Information

Item Value
gene id G117811
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 43226554 ~ 43232574 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU159082
GTGTGTGACGTGCCTGTCCCCTGATTGGGTGTTAGGGGGTGGGGCTACAGACCTAATCAATATATGCACCTGTGTAGGTGTGCTGCGGGAGGcctttcttttgttctgtttgctgCAGGCAGCTCAGTTTTCTGGGCCTGCTTGGTTTGGTTCTGTTTGACATTATGctttagttgttttttgttgataCATAGGTTTTCTTTGGGCCgcctttttgtttataaatgtctggaCATGAACCTTTTTCTAATTTCttcattaaatttatattttttgccatttaaa
>TU159083
gaattattctgtaatagAAAAGGAGGCTTTGGCCCTAATTTGGGCCCTGAAACACTTTGAGGTCTATGTGGGTACGGCTTGTTCTCTGGTAGTGTATACTGATCATAACCCCTTGACTTTTTTGCATTCTTTACAGAATCCGAACCAGCGATTGATGAGATGGTGTCTGTTTTTACAGGGGTACCACCTAGACATACGGCATATCAAGGGCCAGGATAATGTAATTGCTGATGCCCTGTCCCGTGGTCCACTGGGCGCCAGGGTTGCTGGTGGAGACTGGTGAATGAGGAGGTTGTGTGGAGTGGACTTGAAACATGGAGATGGCAGGACTGGATCAAAGCTGTTGgagttctgtttttcttttgtttgttttttttgttttttttgttttttttaagggggGGTGTGTGACGTGCCTGTCCCCTGATTGGGTGTTAGGGGGTGGGGCTACAGACCTAATCAATATATGCACCTGTGTAGGTGTGCTGCGGGAGGcctttcttttgttctgtttgctgCAGGCAGCTCAGTTTTCTGGGCCTGCTTGGTTTGGTTCTGTTTGACATTATGctttagttgttttttgttgataCATAGGTTTTCTTTGGGCCgcctttttgtttataaatgtctggaCATGAACCTTTTTCTAATTTCttcattaaatttatattttttgccatttaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159082 False 285 lncRNA 0.41 2 43226554 43232574
TU159083 True 688 lncRNA 0.43 2 43226554 43227339

Neighbor

gene id symbol gene type direction distance location
dock7 dock7 coding downstream 399623 42745620 ~ 42826931 (-)
kank4 kank4,LOC107731645,LOC107704518,LOC107692389,LOC107556542,LOC107591186 coding downstream 498147 42657958 ~ 42728407 (-)
LOC107197605 NA coding downstream 570473 42652533 ~ 42656081 (-)
LOC103033504 NA coding downstream 844857 42361736 ~ 42381697 (-)
LOC103030126 LOC103030126,LOC108440237,LOC108271568,LOC107692395 coding downstream 891430 42276265 ~ 42335124 (-)
jak1 jak1,LOC107556544,LOC107659055,LOC107739023,LOC107709186 coding upstream 335155 43567729 ~ 43619228 (-)
G117662 NA non-coding downstream 790017 42368505 ~ 42436537 (-)
G117660 NA non-coding downstream 875359 42350120 ~ 42351195 (-)
G117623 NA non-coding downstream 1009538 42216458 ~ 42217016 (-)
G117578 NA non-coding downstream 1113495 42097731 ~ 42113059 (-)
G117569 NA non-coding downstream 1162546 42063212 ~ 42064008 (-)
G117954 NA non-coding upstream 205548 43438122 ~ 43438335 (-)
LOC111193793 NA non-coding upstream 210278 43442852 ~ 43449854 (-)
G117963 NA non-coding upstream 354928 43587502 ~ 43850446 (-)
G118011 NA non-coding upstream 541303 43773877 ~ 43775458 (-)
G118019 NA non-coding upstream 651615 43884189 ~ 43886064 (-)
LOC103041916 LOC107758363,LOC107684070,LOC107692412 other downstream 2208740 40816133 ~ 41017814 (-)
LOC103034527 NA other downstream 2456872 40731296 ~ 40769682 (-)
LOC103040080 LOC108440156 other downstream 2862594 40360319 ~ 40363960 (-)
LOC103028549 NA other downstream 3935526 39284217 ~ 39291028 (-)
LOC103032356 LOC108441420,LOC108272184,LOC107582737,LOC107726519 other downstream 4262860 38953162 ~ 38963694 (-)

Expression


Co-expression Network