LOC103034364


Basic Information

Item Value
gene id LOC103034364
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 38407298 ~ 38411708 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249084.3
ttttttttttcttttgacaaCATAATTGCAAACTGTGTGATGTGCTATATGAGCTAATCCCCAACTGGAAATGAGGAAAACATGGTTTAGGACATTGCTGCtgaactttttatgtttttatacatgTCAAGCTAAAACATGTGTAGTTGGAATGTTGGGGGAATCTGTCTCTATTCCCTGTCTTTATAATGGACCAGAGGATTTGACCACTTTAAACATTTCATTTGAATGGAGAAGAGGCTCTGAGGTGGTCTACAAAGCTGTGTGGAGAGGGGGACATGAGGAAAGACTCGAAGTGGACTTCAATAGCAGGAGCACAGTGTCCTCTCTGGCACAAACTGGAAATTTCACGTTGAAGTTAAATGACATCCGTTTTCCAGATGCCCAGAATTACAGTCTATATTTAAAGCGTCTGGACCGTGGAGCTAATGCTTCAATATGCACTGTCTGCCTGAGTGTTGCAGCTCATTTTACTCCACCTGTGTTGATGAGAACGGGTGGGAAAGAGGGAGAAGCAACTCGATTGGTTTGCCAGTCTCAGGGCGGTTTTCCTGAACCTGCAGTTCACTGGTATATCAACCACACTCAGCATCCCCCAGCGGACACAGTCAGTACACATACAAGCACTCTTCCCCATTCTAAACTCTACAACGTCACCAGCATCCTTTATACTGCCATTCCACGAGACACCACCGTATCCTGTGCCATAGAAAACCACCTGCTGAATGAAACTCTGACCACAATCAGCTATGACGTTGGGTCCATTCACTCACATGGATTCGTATGGATTCTCAGCGTCATTCTTTGTGTGATAGTGACTGTGCTGGTCTTAATAGCTCTGTGTTACCAGAAGAAATGGGACAGAGACAGAAGAAGAGAACGTGAAGATGATTCAGTCTGTGAGGAAACAGAAATGATCATGCTGGACATGGACGCCATGGACGGGCAACTTAACATAGACTAATCTGACACTGATGACTGGCCACACACCACTACTGCACTGCTGGACTGTATTCATTAACTcaacaaatataatattaaagcatattgtgACTGTCTcacaaaaaacaccacaaaataGCTACTTCCTTTCCAGGAAAATGGGACAAAAGCACTTTGGAGCACTTCAATTTGTCCATTTATCATAATATTTGAATCTGGCAGAATCAGTTTaagttaaaaattacaaaaactgtattaagtgagagaaaaataaattttagtACTGATTACAGACAGGTTATGACTTAAAACTGTGtgaataaatcagtttaaagtgaaataaagatTTCCATCTCA
>XM_015605772.2
ttttttttttcttttgacaaCATAATTGCAAACTGTGTGATGTGCTATATGAGCTAATCCCCAACTGGAAATGAGGAAAACATGGTTTAGGACATTGCTGCtgaactttttatgtttttatacatgTCAAGCTAAAACATGTGTAGTTGGAATGTTGGGGGAATCTGTCTCTATTCCCTGTCTTTATAATGGACCAGAGGATTTGACCACTTTAAACATTTCATTTGAATGGAGAAGAGGCTCTGAGGTGGTCTACAAAGCTGTGTGGAGAGGGGGACATGAGGAAAGACTCGAAGTGGACTTCAATAGCAGGAGCACAGTGTCCTCTCTGGCACAAACTGGAAATTTCACGTTGAAGTTAAATGACATCCGTTTTCCAGATGCCCAGAATTACAGTCTATATTTAAAGCGTCTGGACCGTGGAGCTAATGCTTCAATATGCACTGTCTGCCTGAGTGTTGCAGCTCATTTTACTCCACCTGTGTTGATGAGAACGGGTGGGAAAGAGGGAGAAGCAACTCGATTGGTTTGCCAGTCTCAGGGCGGTTTTCCTGAACCTGCAGTTCACTGGTATATCAACCACACTCAGCATCCCCCAGCGGACACAGTCAGTACACATACAAGCACTCTTCCCCATTCTAAACTCTACAACGTCACCAGCATCCTTTATACTGCCATTCCACGAGACACCACCGTATCCTGTGCCATAGAAAACCACCTGCTGAATGAAACTCTGACCACAATCAGCTCTCTGTGTTACCAGAAGAAATGGGACAGAGACAGAAGAAGAGAACGTGAAGATGATTCAGTCTGTGAGGAAACAGAAATGATCATGCTGGACATGGACGCCATGGACGGGCAACTTAACATAGACTAATCTGACACTGATGACTGGCCACACACCACTACTGCACTGCTGGACTGTATTCATTAACTcaacaaatataatattaaagcatattgtgACTGTCTcacaaaaaacaccacaaaataGCTACTTCCTTTCCAGGAAAATGGGACAAAAGCACTTTGGAGCACTTCAATTTGTCCATTTATCATAATATTTGAATCTGGCAGAATCAGTTTaagttaaaaattacaaaaactgtattaagtgagagaaaaataaattttagtACTGATTACAGACAGGTTATGACTTAAAACTGTGtgaataaatcagtttaaagtgaaataaagatTTCCATCTCA

Function

GO:

id name namespace
GO:0036344 platelet morphogenesis biological_process
GO:0030220 platelet formation biological_process
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249084.3 True 1299 mRNA 0.41 6 38407298 38411708
XM_015605772.2 False 1212 mRNA 0.41 6 38407298 38411708

Neighbor

gene id symbol gene type direction distance location
gtpbp6 gtpbp6,LOC104953295 coding downstream 4745 38395866 ~ 38402553 (-)
slc9a7 slc9a7,LOC107673530,LOC107711095,LOC107753405,LOC107685298 coding downstream 66456 38263121 ~ 38340842 (-)
LOC103039807 cyfip1,LOC107673532,LOC107716963,LOC107685293 coding downstream 174746 38164962 ~ 38232552 (-)
herc2 herc2 coding downstream 260675 38058927 ~ 38146623 (-)
oca2 oca2,LOC107716962 coding downstream 358410 37904635 ~ 38048888 (-)
ptger3 ptger3,LOC107585167,LOC107711104,LOC107673459,LOC107682156,LOC107734856 coding upstream 79077 38490785 ~ 38501152 (-)
zranb2 zranb2,LOC107685308,LOC107726518 coding upstream 92418 38504126 ~ 38511378 (-)
LOC111193784 NA coding upstream 552424 38964132 ~ 38971739 (-)
chd1l NA coding upstream 560441 38972149 ~ 38996466 (-)
LOC111193785 NA coding upstream 567028 38978736 ~ 38981145 (-)
G116794 NA non-coding downstream 49930 38354991 ~ 38357368 (-)
G116754 NA non-coding downstream 446687 37953796 ~ 37960611 (-)
G116653 NA non-coding downstream 648138 37640493 ~ 37759160 (-)
G116646 gabra5,LOC107673539,LOC107711088 non-coding downstream 795011 37600824 ~ 37612287 (-)
LOC111193781 NA non-coding downstream 907102 37498363 ~ 37500196 (-)
G116908 NA non-coding upstream 21631 38433339 ~ 38434506 (-)
G116910 NA non-coding upstream 74342 38486050 ~ 38487112 (-)
G116906 NA non-coding upstream 75518 38487226 ~ 38487631 (-)
G116926 NA non-coding upstream 181360 38593068 ~ 38593493 (-)
G116927 NA non-coding upstream 183772 38595480 ~ 38596795 (-)
G116805 plcxd1,LOC103035541,LOC105895009,LOC107711026,LOC107673474,LOC108441321,LOC107585164 other downstream 22700 38381270 ~ 38384598 (-)
tubgcp5 tubgcp5,chst7,LOC107585157,LOC107582726,LOC107673606,LOC107753407,LOC107582727 other downstream 158674 38233474 ~ 38248624 (-)
G116581 eif4b,LOC108441049 other downstream 1361510 37041361 ~ 37045788 (-)
LOC103023810 NA other downstream 1375935 37022175 ~ 37031363 (-)
LOC103028059 ghrl other downstream 2345014 36056563 ~ 36062284 (-)
negr1 negr1,LOC107673552,LOC107711106,LOC107726517,LOC107582736,LOC107585169,LOC107685309 other upstream 218929 38630637 ~ 38899446 (-)
LOC103032356 LOC108441420,LOC108272184,LOC107582737,LOC107726519 other upstream 541454 38953162 ~ 38963694 (-)
LOC103028549 NA other upstream 872509 39284217 ~ 39291028 (-)
LOC103040080 LOC108440156 other upstream 1948611 40360319 ~ 40363960 (-)
LOC103034527 NA other upstream 2319588 40731296 ~ 40769682 (-)

Expression


Co-expression Network