prpsap1 (prpsap1,LOC106606986,LOC107731682,LOC106588225,LOC105013149)


Basic Information

Item Value
gene id prpsap1
gene name prpsap1,LOC106606986,LOC107731682,LOC106588225,LOC105013149
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 25537693 ~ 25570327 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007252149.3
TCCAATGAGCAAACTCgtggtgtgttttctctcttttccaacCGCATTGCAACCAAGTTTGCAGTGATACAAATCCATCCAGCTTTACGGGACACTTTGCGCCCCGGTCTTGTTTACGAGCTTCGTAATCGGATAGTATTTTGTTTCGGCTCGGAGTCTCGGAGAGGAAGAGAGGTCCAGATCGGTTTGCAGCTGCAGGTTCTGGTCTattcctttctttccttcttctgGAGACCATTCCCTGTCCTGCTGAGTTACATGTCTGTGGCTTTATATGGTCATAAGTGATTATTTTCTTTGGTAAACCTGTTTAGACTACGAGGATAATCCTGTTTGTGGTGAATGAGCAGCAGAAAGACCTGGGCTTGCTCTgaaagcaggagagagagagagagatagagagagagagagagagaagaggagctgCTAGATTTTAGTGGACTTCTGTGAGGGCTTAGCTTAACTAGTTACAGTCAGTCATCATCCAGGGCACTGAGTAGCTAACGTTAGATTAGGTTAAccaaggttagctagcttagtttAACTAGCTAAGATAGTTTATATGTTGGAGTGTGTTTAGGTTAATATATTTTCCTTGTTTTCCTCTCATTTTTAATTCTGTTGTGTCATGGGACATTTTTTCTGACTAGTTTGGGTAGTTAACCTAAGTTAGTGGATTTAAATTCCACCATATAGCCAACAAGGTTATCTATGTTAACTCTTTATCACATCAAGTTTTTacataacgttagctagctaacgctaagtaAGCTAGTGCAGTTCTAGTTTTCTACACTTTCACAAGTTTGCCCCCAAACGTAGCTAGGTTAACCACATTTCCACTTGGACTAAAGTCATTTGTATCACTGCACATTTGTTTTTGCTTCTTTGCGGCCTCCCAAAAAACAATTTTACTAAATTTAAGTAAGAAAACACCCAGTTCTGTCTAAAAATGCCCAAAAGTCGAGCTGGCCCTCACAAGTTTTCTCTGTCTCACCCTCAAACACCCAAAGCTCTCCTATGGTTATAAGTCCAAAATGAATGTGGGGAGAAGTGGCTACCGGGTCTTTTCTGCGAACTCCACACCAGCTGGCTCTGAACTCGCCAAGCAGATCACTGAGCGTCTTGGTGTGGAGTTGGGAAAATCAGTGGTCTACCAGGAGTCAAACAGAGAGACCAGAGTGGATGTGAAGGAATCAGTCAGAGGACAGGACATATTCATCATTCAGACCATGCCCAGaGATGTGAACACAGCAATAATGGAGCTGCTGGTGATGGCGTACGCACTGAAGACATCCTGCGCCAAGAACATTATCGGGGTCATCCCATATTTCCCCTATAGCAAACAGTGCAAGATGAGGAAGAGAGGCTCCATTGTCTGCAAGCTGCTGGCCTCCATGCTCGCTAAAGCTGGCCTGACTCACATCATCACTATGGATCTGCATCAGAAAGAGATCCAGGGCTTCTTCAGCTTCCCTGTAGACAACTTGCGAGCTTCACCCTTTTTACTGCAGTACATTCAGGAAGAGATTCCAGACTACAGAAATGCTATTATAGTTGCAAAATCCCCCTCGGCTGCAAAGAGggctcagtCGTATGCTGAGAGGTTGAGGTTGGGTTTGGCAGTGATGCACGGTGAAGCGCAGTGTGCTGAGTCAGACATGGCCGACGGTCGGCATTCGCCCCCTGCATTCAGACCCTCCTGTGGACCCCCCGGCCTTGAGCTGCCCTTGATGATGGCCAAAGAAAAACCGCCCATCACAGTTGTGGGAGATGTTGGGGGTCGAATTGCCATCATTGTGgatGACATCATCGATGATGTGGCAGACTttgtagcagcagcagagatCCTGAAGGAAAGAGGAGCATATAAAATCTACATCATGGCCACCCATGGCCTGCTCTCAGCGGATGCTCCTCGCCTCATAGAGGAGTCTGCCATAgatgagGTGGTTGTGACCAACACTGTGCCCCATGAGGTCCAGAAGCTACAGTGTCCCAAGATCAAAACAGTGGACGTCAGTATGATTTTAGCCGAGGCCATCCGGCGCATCCACAACGGCGAGTCCATGGCCTACCTGTTCCGCAACGTCACTGTGGATGACTAGCCCCAGGCTTTAGGAAGTCCCTCGGCTGATTCGGGACCAGTTTGgggtctttgtttttttgtggtggTCTGGGATTTGAAGGATGGACAGTAACTCTGTGCAGTACTTGGAGACCAGCCACTGACCCGGGGCCTGTTTTCTTAAAAGCATGACAGTATTAAAACCTTCCTCATGAGGAAA
>XM_007252150.3
CGTCCAATGAGCAAACTCgtggtgtgttttctctcttttccaacCGCATTGCAACCAAGTTTGCAGTGATACAAATCCATCCAGCTTTACGGGACACTTTGCGCCCCGGTCTTGTTTACGAGCTTCGTAATCGGATAGTATTTTGTTTCGGCTCGGAGTCTCGGAGAGGAAGAGAGGTCCAGATCGGTTTGCAGCTGCAGCTCTCCTATGGTTATAAGTCCAAAATGAATGTGGGGAGAAGTGGCTACCGGGTCTTTTCTGCGAACTCCACACCAGCTGGCTCTGAACTCGCCAAGCAGATCACTGAGCGTCTTGGTGTGGAGTTGGGAAAATCAGTGGTCTACCAGGAGTCAAACAGAGAGACCAGAGTGGATGTGAAGGAATCAGTCAGAGGACAGGACATATTCATCATTCAGACCATGCCCAGaGATGTGAACACAGCAATAATGGAGCTGCTGGTGATGGCGTACGCACTGAAGACATCCTGCGCCAAGAACATTATCGGGGTCATCCCATATTTCCCCTATAGCAAACAGTGCAAGATGAGGAAGAGAGGCTCCATTGTCTGCAAGCTGCTGGCCTCCATGCTCGCTAAAGCTGGCCTGACTCACATCATCACTATGGATCTGCATCAGAAAGAGATCCAGGGCTTCTTCAGCTTCCCTGTAGACAACTTGCGAGCTTCACCCTTTTTACTGCAGTACATTCAGGAAGAGATTCCAGACTACAGAAATGCTATTATAGTTGCAAAATCCCCCTCGGCTGCAAAGAGggctcagtCGTATGCTGAGAGGTTGAGGTTGGGTTTGGCAGTGATGCACGGTGAAGCGCAGTGTGCTGAGTCAGACATGGCCGACGGTCGGCATTCGCCCCCTGCATTCAGACCCTCCTGTGGACCCCCCGGCCTTGAGCTGCCCTGGAAACACCAAGCTCCATTTCCTGGCATCGAGCTTCCAATGATGATGGCCAAAGAAAAACCGCCCATCACAGTTGTGGGAGATGTTGGGGGTCGAATTGCCATCATTGTGgatGACATCATCGATGATGTGGCAGACTttgtagcagcagcagagatCCTGAAGGAAAGAGGAGCATATAAAATCTACATCATGGCCACCCATGGCCTGCTCTCAGCGGATGCTCCTCGCCTCATAGAGGAGTCTGCCATAgatgagGTGGTTGTGACCAACACTGTGCCCCATGAGGTCCAGAAGCTACAGTGTCCCAAGATCAAAACAGTGGACGTCAGTATGATTTTAGCCGAGGCCATCCGGCGCATCCACAACGGCGAGTCCATGGCCTACCTGTTCCGCAACGTCACTGTGGATGACTAGCCCCAGGCTTTAGGAAGTCCCTCGGCTGATTCGGGACCAGTTTGgggtctttgtttttttgtggtggTCTGGGATTTGAAGGATGGACAGTAACTCTGTGCAGTACTTGGAGACCAGCCACTGACCCGGGGCCTGTTTTCTTAAAAGCATGACAGTATTAAAACCTTCCTCATGAGGAAA

Function

symbol description
prpsap1 Predicted to enable magnesium ion binding activity and ribose phosphate diphosphokinase activity. Predicted to act upstream of or within nucleoside metabolic process and nucleotide biosynthetic process. Orthologous to human PRPSAP1 (phosphoribosyl pyrophosphate synthetase associated protein 1).

NR:

description
PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007252149.3 True 2288 mRNA 0.47 10 25537695 25570327
XM_007252150.3 False 1514 mRNA 0.51 12 25537693 25570327

Neighbor

gene id symbol gene type direction distance location
LOC103024355 LOC103024355,LOC108424794,LOC108273264,LOC106588570,LOC107681484,LOC107711600 coding upstream 1153 25528577 ~ 25536540 (+)
LOC103023085 slc25a6,LOC108424711,LOC108273102,LOC108426068,LOC107752260,LOC107702905,LOC107557761,LOC103140121,LOC106926499 coding upstream 196612 25333141 ~ 25341081 (+)
rhbdf2 rhbdf2 coding upstream 218341 25265475 ~ 25319352 (+)
LOC111193666 NA coding upstream 278520 25257569 ~ 25259173 (+)
acox1 acox1 coding upstream 305292 25209804 ~ 25232401 (+)
LOC103034703 pltp,LOC107696437,LOC107744357,LOC107740259,LOC107666176,LOC107560511,LOC107587597 coding downstream 87526 25657853 ~ 25670407 (+)
ncoa5 NA coding downstream 117080 25687407 ~ 25700739 (+)
LOC103035650 NA coding downstream 464349 26034676 ~ 26038094 (+)
LOC111193667 NA coding downstream 488854 26059181 ~ 26062510 (+)
LOC111193668 NA coding downstream 498740 26069067 ~ 26074451 (+)
G113682 NA non-coding upstream 27679 25418619 ~ 25510014 (+)
G113683 NA non-coding upstream 110957 25426460 ~ 25426736 (+)
G113680 NA non-coding upstream 136507 25400454 ~ 25401186 (+)
G113552 NA non-coding upstream 436810 25037538 ~ 25100883 (+)
G113557 NA non-coding upstream 461752 25075205 ~ 25075941 (+)
G113703 NA non-coding downstream 38081 25608408 ~ 25608878 (+)
G113707 ctsa,LOC107587598,LOC107696438,LOC107744356 non-coding downstream 101142 25671469 ~ 25683917 (+)
G113711 NA non-coding downstream 131621 25701948 ~ 25755148 (+)
G113732 NA non-coding downstream 436548 26006875 ~ 26007347 (+)
LOC111193688 NA non-coding downstream 487872 26058199 ~ 26059131 (+)
ube2o ube2o other upstream 140710 25342153 ~ 25396983 (+)
G113642 acox1 other upstream 275472 25261386 ~ 25262221 (+)
LOC103030782 NA other upstream 283563 25250384 ~ 25254130 (+)
G113422 NA other upstream 1062355 24474078 ~ 24475338 (+)
LOC103027315 manbal,LOC107666036,LOC107744407 other upstream 1118014 24411009 ~ 24419679 (+)
G113979 snrpb,LOC101173217 other downstream 1777122 27347449 ~ 27352444 (+)
LOC103037845 necab3,LOC108431835,LOC108271560,LOC107666033,LOC107553901,LOC107740282,LOC107587636,LOC107744391 other downstream 1820687 27391014 ~ 27489522 (+)
LOC103044650 LOC108427558 other downstream 3637416 29207743 ~ 29281311 (+)
LOC111193669 NA other downstream 4312044 29882371 ~ 29887978 (+)
G114698 NA other downstream 4556008 30126335 ~ 30129896 (+)

Expression


Co-expression Network