tmem125 (tmem125,LOC108440199,LOC107725195,LOC107684333,LOC107551025)


Basic Information

Item Value
gene id tmem125
gene name tmem125,LOC108440199,LOC107725195,LOC107684333,LOC107551025
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 41194102 ~ 41216267 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007258348.3
cgcacacgcgcgcgcacacgAGCGCGAGGCGAAAGTCCGGATGGGTGGAAGTGAGCACACCTGAGCCGCTGCTCTCCGGCCGGGCTGCCTTCATTTCGGTGCGCTGAGTCCGCTGGAGCGCTGCGGGGATACGGATATCAGAGCTCGGCTGATTAAAGCCGGTGTTCCCGCTGCTGGGAGAACCGCCGCGCtgtgagagaggaggagaaggagaccCGAGTGAGCAGCGAGTGACCGGAGCAGCAGCTCAGCAGCGCAGTGACACATTAACCTCATCCTGGCCTAAAAAAAGGATACAAAGACATCGTTACATCATTGTCCCTGTCCGGCAACCAAGCGAGGAAGGAACAAGGCAGCGGCTGTTGCATGGTGACCAAAGACAAGAGGCTGCTTTGTGAATGCTTCCTATTCAGATACATGTCCTGCCACCCAACAGACCCTGACACCAAAGAATAATGCTTTGCTACAGACCTGACTCAGAACACAGGCTACCTTGATGCTTGGCTTGTACCTGTCAGGAAGGGCGGAGCTTTGTTTTGGTTTCTTGAAGACTTGAAGACTGCGAGGGATACCAAGAGGATTTTTCACAAAGTAGACAAAGACTTGCAGGTGCATTTATTGACCACCTCCCTTCTGACTTGACCCTGGTACTCCATCAGCCTCAGTGGTGGCTGGGTTGGGGGCAGCAGCATGCCGGAGCTGGAGGACTTCCCCCAACCTCGGGgccatcagcagcagcatgcTGACCCGGCCCGAATCCAGCAGAACCTCCTGGAGGAGCAGGTGGAGCTGTGGTGGTTCAGCGAGCCCCGCAAATCCCTGCTGTGCTACTGTGCCTCGGTAGCCCTGATCCTGGGCTGCGGCCTGGGCGGAGTGGGCCTCCTgtccaccaccaccagcctgtCCAGCGAGTGGAGGCTGGGGGCAGGGACGGCTCTGTGCCTGCTGGCCCTGGGGGTTCTCCTCAAGCAGCTGCTGAGCTCTGCCGTGCAGGACATGAACTGTGTGAGGAGTCGGCGGCGCATCAACGTGCTGAAGAGCGGCGGCCTGTCCGACGTCCTGGTCGTTCTCGTCACAGGAGTGTCCCTGCTGATTTGTGGAGCTGTGCTTCTGGACATTGCGCTGGCCTATCACATGCCTAAACCTGGCCAGGCCCTGAATGACATGTATATATCTGGAGTGGTGCTGCTAGCGGGTGGAGGGTTTACAGTGTTAGCCGTTGGGATTTACTCGACTGTGGTTTTCCTCTTAGAGAGGACGAGGCCGGAGCGGAGCCTGAGGGACAGAATGGTGGACATCTTCACTGTTTCAGGACAAATGCGCACCAGGAGAGAAACTGCATCAAGCCTGGCTCAGCTTATATGACTGTATGACTGCCTTCTGTGACTGACTTCTAGCATCCTTATATGAAAGACAATGCAGCTCAACCAAAAAATGCAGATGCTAGAGAAATGGACTGTAAACGGATCTATACGTTAAATCTTCATTTTCTTCGGAGACTTACAGAACAAGAACCCGACGATCGATTATGAAACACAGCCACTAATGAACCTTTTGCACAGTGGACAAATATTGATTGAAGAATGTATGACACTACAACCATCGGTACAAATCATCGCACATGACACACTATACATATTGTCATATTTACATCTCACTGTCAGTTACAATGTAGGCCTGGATTGGTCTTGCTGTGGTGGTGAGACTGAGGATGCACAATGATATACTGAATTAAATGAGTATAAgcacatattttattaaaaaaaaaaaccgtaATATTTAGATTTGACTGATACTTCAAACTGATATTTGATGATAGATTTATTATAATCTAGAGGTAAATATTAATGTGGAGGCACAGCTGGGTACCTGAGCTAAGTATTTGCAtactactttaatactttacaaataaatatttaatttcccTGTAA

Function

symbol description
tmem125 Predicted to be integral component of membrane.

NR:

description
transmembrane protein 125

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007258348.3 True 1931 mRNA 0.51 3 41194102 41216267

Neighbor

gene id symbol gene type direction distance location
LOC103041612 LOC108440175 coding upstream 68531 41121126 ~ 41125571 (+)
slc35d1 slc35d1,slc35d1a,LOC108441641,LOC108272060,LOC107724140,LOC107758361,LOC107684099 coding upstream 396166 40786228 ~ 40797936 (+)
LOC103042225 NA coding upstream 410901 40777645 ~ 40783201 (+)
LOC103035173 serbp1,LOC107594603,LOC107758366,LOC107692416 coding upstream 461536 40725657 ~ 40732566 (+)
hsd17b7 hsd17b7,LOC107551038,LOC107724130 coding upstream 476032 40710906 ~ 40718070 (+)
tie1 tie1,LOC107731644,LOC107684058 coding downstream 66584 41282851 ~ 41305229 (+)
mpl NA coding downstream 92309 41308576 ~ 41323618 (+)
prpf38a prpf38a coding downstream 127155 41343422 ~ 41347799 (+)
pik3r3 pik3r3,LOC107692397,LOC107717145,LOC107594617,LOC106584012,LOC107556985 coding downstream 270194 41486461 ~ 41801791 (+)
gpbp1l1 gpbp1l1,LOC107731630,LOC107551044,LOC107725200 coding downstream 873722 42089989 ~ 42099620 (+)
G117299 NA non-coding upstream 102110 41091501 ~ 41091992 (+)
G117183 NA non-coding upstream 372772 40817176 ~ 40821330 (+)
G117156 NA non-coding upstream 563958 40624010 ~ 40630144 (+)
G117154 NA non-coding upstream 573336 40619568 ~ 40620766 (+)
G117152 NA non-coding upstream 613798 40567208 ~ 40580304 (+)
G117324 ap1m3,LOC108441657,LOC108271949,LOC103463064,LOC106528254,LOC107724146,LOC103137203 non-coding downstream 9908 41226175 ~ 41233853 (+)
LOC111193789 NA non-coding downstream 89056 41305323 ~ 41306911 (+)
G117370 NA non-coding downstream 115934 41332201 ~ 41335785 (+)
G117379 NA non-coding downstream 134684 41350951 ~ 41352350 (+)
G117474 NA non-coding downstream 562684 41778951 ~ 41784207 (+)
fam183a NA other upstream 27943 41159187 ~ 41166159 (+)
LOC103033994 LOC103033994,LOC108441647 other upstream 385557 40799471 ~ 40808545 (+)
G116997 NA other upstream 1834714 39358871 ~ 39359388 (+)
LOC103036266 LOC108441345 other upstream 2799572 38390277 ~ 38394530 (+)
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289 other upstream 3581780 37524851 ~ 37612322 (+)
pomgnt1 pomgnt1,LOC102776429 other downstream 137234 41353501 ~ 41367729 (+)
G117642 NA other downstream 1135540 42351807 ~ 42355784 (+)

Expression


Co-expression Network