uap1 (uap1,LOC107551035,LOC107724142)


Basic Information

Item Value
gene id uap1
gene name uap1,LOC107551035,LOC107724142
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 40637785 ~ 40653811 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007258362.3
TCAAATGACGGAAACGGGAGGCGGCTTTTCTCGTAGTGTAATGTAACTCAGCGCGTTTTAGAAAGACGGGAAAGCGAAGTCTGCTTTAGAGACTGTCAGCTACATTGAAGATCTGACCCTGTGAGACATGGACATTAGCAGACTCACACAGAGACTTGCTGAGGCTGGGCAGTCCCACCTCCTGCAGTTCTGGGACCAGCTCAGCCCTGAAGAACAAGCTGACCTGGTCTCTGATCTGGAGAACATGGACTTTAAAGAGATCAACTGCTTTTTTACGAATGCTATGAAGACGTCTACCCAGACCAAGCAGGACAATGTGGACACCAGAATGGAGCCAGTGCCGCGGGAGATCCTGGGCAGTGTGACCCGAGATCGAGAGTCTCTGAAAGACTGGGAGGAGGAAGGCCTGCACTGTATCTCTCAGAACAAAGTAGCAGTTCTACTGCTGGCTGGAGGTCAGGGAACACGACTAGGTGTTCCATACCCCAAAGGCATGTACGACGTAGGCCTGCCATCCCACAAAACCCTCTTTCAGATCCAGGCCGAGCGCATCCTGAAACTGGAGCAACTAGCAGAGAACAATCACAAGACGAAGTGCTGCATTCCATGGTACATTATGACGAGTGGCAGAACAATGGACTCCACTAAAGAGTTCTTCGCCAAACACAAGTATTTCGGCCTTAAAGAAGAGAACATCATATTCTTTCAGCAAGGCATGCTTCCAGCCATGGACTTCAATGGAAAAATTATACTTGAGGACAAAGGGAAACTGGCCATGGCACcagatggcAATGGAGGTCTTTACAGATCACTGGCAGCAAATAAGATTGTGGAAGACATGGAGAGGAGAGGCATCTCCTACATTTATGTCTACTGCGTGGACAATATCCTGGTGAAAGTGGCAGACCCAGCCTTTATTGGTTTTTGTGTGCGTAAGGGAGCAGACTGTGGTGCGAAGGTTGTGGAGAAAACCAATCCGACTGAGGCAGTGGGTGTGGTCTGTAAAGTGGATGGGCGTTACCAAGTGGTTGAGTACAGTGAAATCACATTGTCCACAGCAGAAAAGCGGAGCAGCGACGGCCGGTTATTGTTCAATGCCAGCAATGTAGCTAATCATTTCTTCAGCCTTCCCTTCCTCAAAGATGTCGTCAATAAGCATGAGCCGCAGTTGCAGCACCATGTGGCCCGGAAGAAAATCCCCTTTGTGGACACTCGAGGACAGCTAATTTCACCTCACAAACCCAACGGAATTAAGATGGAAAAATTTGTTTTCGACATTTTCCAATTTGCCAAgATGTTTGTGGTGTACGAGGTGCTGAGGGAGGATGAGTTTTCTCCTCTGAAGAATGCAGACAGTCAGGATGGGAAGGATAACCCCACCACCGCTCGACAAGCACTCATGTCCCTGCACCACCGCTGGATCCTCAACGCAGGCGGACATTTTATTGACGAAAATGGAACGCGCCTGCCTGCTATTCCCAGACACGGACCAGCAGGGACACACACACCTGATGGCAGCCAGAATCTGAAGGACGGCACTGACCTGCCAATCAAATGTGAGATCTCTCCACTTGTGTCCTATGGAGGAGAGGGACTGGAGGATCTTGTGAAAGGCAGAGAATTCCACCCTGCACTGATCATCGATGAAAGCGATGTCCATGAGCAAGTGAGAAACGGACTGTAAACTGCAAGCTggctgctgtgctgtttggaAGCAATTTTCATCTCCTTCGACTTTCTTCCTGCCAGGCTGAAAGGACTGTGACATTCTAGTGCAATAATATGAaggaaataatttattttgctaaaacatatttttatataaattcctTCCGTTTCTTAGAATGGGGATATGTGTTGTAGCTGTTAATTTATATGTGTACACACCTttggaataaatgaatgaatgtgatGCAATGAAAAGTATGGTacatgggttaaaaaaaaaaagctttcggTACAGACCGTGTGGTTCTCTGAATTGGTGCAGCTCATCATCAGGGCTTTACCACATCTGAAATTATGTTCCAAGACACTGATTAAGTTTAGGGGTAAATGCTTTGTGcctctttgttttctgtttttatacgCTGATTCTTTACTTTGTTTAAATGTTCTTCATAGGAAGGACACACTTGTTCTGACAAGtatgcaaagtttttttttttttttttttttttttttttacaaataaattattgttgGCTTTGTTTCTGTTATCAAATAACAGAATCATACAAAGTAGAAAATGGTTAAATAGAATTTCTAGCATGAGAACTACTGTAAACTCCTCCTGTCTGATCAATCttttcacaaataaataagtaaataaagtaaatacattcTTTA
>XM_007258364.3
TCAAATGACGGAAACGGGAGGCGGCTTTTCTCGTAGTGTAATGTAACTCAGCGCGTTTTAGAAAGACGGGAAAGCGAAGTCTGCTTTAGAGACTGTCAGCTACATTGAAGATCTGACCCTGTGAGACATGGACATTAGCAGACTCACACAGAGACTTGCTGAGGCTGGGCAGTCCCACCTCCTGCAGTTCTGGGACCAGCTCAGCCCTGAAGAACAAGCTGACCTGGTCTCTGATCTGGAGAACATGGACTTTAAAGAGATCAACTGCTTTTTTACGAATGCTATGAAGACGTCTACCCAGACCAAGCAGGACAATGTGGACACCAGAATGGAGCCAGTGCCGCGGGAGATCCTGGGCAGTGTGACCCGAGATCGAGAGTCTCTGAAAGACTGGGAGGAGGAAGGCCTGCACTGTATCTCTCAGAACAAAGTAGCAGTTCTACTGCTGGCTGGAGGTCAGGGAACACGACTAGGTGTTCCATACCCCAAAGGCATGTACGACGTAGGCCTGCCATCCCACAAAACCCTCTTTCAGATCCAGGCCGAGCGCATCCTGAAACTGGAGCAACTAGCAGAGAACAATCACAAGACGAAGTGCTGCATTCCATGGTACATTATGACGAGTGGCAGAACAATGGACTCCACTAAAGAGTTCTTCGCCAAACACAAGTATTTCGGCCTTAAAGAAGAGAACATCATATTCTTTCAGCAAGGCATGCTTCCAGCCATGGACTTCAATGGAAAAATTATACTTGAGGACAAAGGGAAACTGGCCATGGCACcagatggcAATGGAGGTCTTTACAGATCACTGGCAGCAAATAAGATTGTGGAAGACATGGAGAGGAGAGGCATCTCCTACATTTATGTCTACTGCGTGGACAATATCCTGGTGAAAGTGGCAGACCCAGCCTTTATTGGTTTTTGTGTGCGTAAGGGAGCAGACTGTGGTGCGAAGGTTGTGGAGAAAACCAATCCGACTGAGGCAGTGGGTGTGGTCTGTAAAGTGGATGGGCGTTACCAAGTGGTTGAGTACAGTGAAATCACATTGTCCACAGCAGAAAAGCGGAGCAGCGACGGCCGGTTATTGTTCAATGCCAGCAATGTAGCTAATCATTTCTTCAGCCTTCCCTTCCTCAAAGATGTCGTCAATAAGCATGAGCCGCAGTTGCAGCACCATGTGGCCCGGAAGAAAATCCCCTTTGTGGACACTCGAGGACAGCTAATTTCACCTCACAAACCCAACGGAATTAAGATGGAAAAATTTGTTTTCGACATTTTCCAATTTGCCAAgATGTTTGTGGTGTACGAGGTGCTGAGGGAGGATGAGTTTTCTCCTCTGAAGAATGCAGACAGTCAGGATGGGAAGGATAACCCCACCACCGCTCGACAAGCACTCATGTCCCTGCACCACCGCTGGATCCTCAACGCAGGCGGACATTTTATTGACGAAAATGGAACGCGCCTGCCTGCTATTCCCAGTCTGAAGGACGGCACTGACCTGCCAATCAAATGTGAGATCTCTCCACTTGTGTCCTATGGAGGAGAGGGACTGGAGGATCTTGTGAAAGGCAGAGAATTCCACCCTGCACTGATCATCGATGAAAGCGATGTCCATGAGCAAGTGAGAAACGGACTGTAAACTGCAAGCTggctgctgtgctgtttggaAGCAATTTTCATCTCCTTCGACTTTCTTCCTGCCAGGCTGAAAGGACTGTGACATTCTAGTGCAATAATATGAaggaaataatttattttgctaaaacatatttttatataaattcctTCCGTTTCTTAGAATGGGGATATGTGTTGTAGCTGTTAATTTATATGTGTACACACCTttggaataaatgaatgaatgtgatGCAATGAAAAGTATGGTacatgggttaaaaaaaaaaagctttcggTACAGACCGTGTGGTTCTCTGAATTGGTGCAGCTCATCATCAGGGCTTTACCACATCTGAAATTATGTTCCAAGACACTGATTAAGTTTAGGGGTAAATGCTTTGTGcctctttgttttctgtttttatacgCTGATTCTTTACTTTGTTTAAATGTTCTTCATAGGAAGGACACACTTGTTCTGACAAGtatgcaaagtttttttttttttttttttttttttttttacaaataaattattgttgGCTTTGTTTCTGTTATCAAATAACAGAATCATACAAAGTAGAAAATGGTTAAATAGAATTTCTAGCATGAGAACTACTGTAAACTCCTCCTGTCTGATCAATCttttcacaaataaataagtaaataaagtaaatacattcTTTA

Function

symbol description
uap1 Predicted to enable UDP-N-acetylglucosamine diphosphorylase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process. Is expressed in several structures, including EVL; ectoderm; hatching gland; pectoral fin; and polster. Orthologous to human UAP1 (UDP-N-acetylglucosamine pyrophosphorylase 1).

NR:

description
PREDICTED: UDP-N-acetylhexosamine pyrophosphorylase isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016779 nucleotidyltransferase activity molecular_function

KEGG:

id description
K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007258362.3 True 2349 mRNA 0.45 11 40637785 40653811
XM_007258364.3 False 2307 mRNA 0.44 10 40637785 40653811

Neighbor

gene id symbol gene type direction distance location
c13h1orf226 nos1ap coding upstream 37490 40580376 ~ 40600295 (+)
nos1ap nos1ap,LOC107711121,LOC107551033 coding upstream 70647 40417327 ~ 40567138 (+)
LOC103040381 rgs5a,LOC108441543,LOC107732440,LOC107564083,LOC107685321,LOC107684230 coding upstream 298111 40318758 ~ 40339674 (+)
LOC103040699 LOC103040699,LOC108440142,LOC108271632 coding upstream 361296 40273386 ~ 40276489 (+)
LOC103027818 rgs8,LOC108441527,LOC108271678,LOC107711118,LOC107551030,LOC107732448,LOC107564081 coding upstream 378566 40224051 ~ 40259219 (+)
ddr2 ddr2,ddr2a,LOC107551036,LOC107692417,LOC107724144 coding downstream 4589 40658400 ~ 40709827 (+)
hsd17b7 hsd17b7,LOC107551038,LOC107724130 coding downstream 57095 40710906 ~ 40718070 (+)
LOC103035173 serbp1,LOC107594603,LOC107758366,LOC107692416 coding downstream 71846 40725657 ~ 40732566 (+)
LOC103042225 NA coding downstream 123834 40777645 ~ 40783201 (+)
slc35d1 slc35d1,slc35d1a,LOC108441641,LOC108272060,LOC107724140,LOC107758361,LOC107684099 coding downstream 132417 40786228 ~ 40797936 (+)
G117156 NA non-coding upstream 7641 40624010 ~ 40630144 (+)
G117154 NA non-coding upstream 17019 40619568 ~ 40620766 (+)
G117152 NA non-coding upstream 57481 40567208 ~ 40580304 (+)
G117147 NA non-coding upstream 275208 40360340 ~ 40362577 (+)
G117111 NA non-coding upstream 501058 40129092 ~ 40136727 (+)
G117183 NA non-coding downstream 163365 40817176 ~ 40821330 (+)
G117299 NA non-coding downstream 437690 41091501 ~ 41091992 (+)
G117324 ap1m3,LOC108441657,LOC108271949,LOC103463064,LOC106528254,LOC107724146,LOC103137203 non-coding downstream 572364 41226175 ~ 41233853 (+)
LOC111193789 NA non-coding downstream 651512 41305323 ~ 41306911 (+)
G117370 NA non-coding downstream 678390 41332201 ~ 41335785 (+)
G116997 NA other upstream 1278397 39358871 ~ 39359388 (+)
LOC103036266 LOC108441345 other upstream 2243255 38390277 ~ 38394530 (+)
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289 other upstream 3025463 37524851 ~ 37612322 (+)
LOC103045245 vdrb,LOC108272216,LOC107585146,LOC107673565,LOC107711077,LOC108441087 other upstream 3516458 37100014 ~ 37121327 (+)
LOC103044253 LOC108440873 other upstream 3923901 36657392 ~ 36713884 (+)
LOC103033994 LOC103033994,LOC108441647 other downstream 145660 40799471 ~ 40808545 (+)
fam183a NA other downstream 505376 41159187 ~ 41166159 (+)
pomgnt1 pomgnt1,LOC102776429 other downstream 699690 41353501 ~ 41367729 (+)
G117642 NA other downstream 1697996 42351807 ~ 42355784 (+)

Expression


Co-expression Network