LOC103025620 (LOC103025620,LOC108431823)


Basic Information

Item Value
gene id LOC103025620
gene name LOC103025620,LOC108431823
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 28271821 ~ 28292098 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015606925.2
CTGTGCTTTACCGCCGGAGGTGGAGAAGAGCCTGCTGCACGGAGGAACAGGCGGGCTGCTTTAAAACCAGTcgctcttatttattttaataggcGGATGtgtaacttagttacttgaAAAAGGAAATATTAGTATATTAACCGCAGTAATAGGCCATATAGGGAGAAGTACGGGTGTATCGTTAACGGGTTTGGAGCGATATTAAGCTGTAGAGTCGGTTAAACGACTAACCTAacataacgttagctagctaatacGGTTTGAATGGACTGAATGggttaagctagctaacatacgGTCAATAAATCCTGCGTTATACTTGAAGCAAAGGACTATGTGTGTCAAATGACGCTGTAGTTAGCTGGATAAGGAGAGTTAAAGGCGTGACTGACTGGGCGTACGACCGTGTTTTGGCGACCACAGCAGCCGGAGGACGATGGCACCCAGGCGGCTAACGCTGCTGCTCATCATCGGGTTTGTGTGGGAGTTCCAGCTAGTTGTGTGCCGTGAGGTTACACTTCCCCCTGGTCCAGTGTACCGGGTAGCAGGGTTCCCCATGTCCCTGCCCTGCACTGTTTCAGGGTATGAGGGTCCACGAACGCAGGACTTCGAGTGGTTCCTGTACCGAGAGGATGCAGGCGAGATGCAGATCGGGGTGGTGTCGACCAGAGACCAGGGGTTTCCTTACGCCCCGTTCCAGGGGCGAGTGCGCTCGGGCGAGGTCCGGGTGGAGAGGGACTCTGATGATAAAGCCAGGCTGGTTATTCAGAGGCTCCGCCCAGACGATCAGGGACGATTCGAGTGTTACACACCGAGCACTGATGTGCGATATCAGGGCAGCTATAGCGCCTCAGTGAATGTCAAAGTGATGCCAGACACCTTGTCAATAACGCACTCTCGCATACTGAGTGGTCAGCCCGTCACAGAGGGCACAGAGCTTCAGCTGACGTGTGCAGCATCTGTCCAGTCACCCCAACACACTCACCTATCTGTTACGTTTGGAGTGCGAGGCAGCACTGATTCTGGATCTCTGGGCCACAACCTCAGAGAGATCATCTCCATCGACCGCGAGCTGCGTGTGATCCCAGGCCGAGGCGCCTATGAAAAGAGGTATAAAGATGGGGAGATCAACCTAGAGAAGAAGAGtggagatggagggagggatctgtacgtGCTAACGATGAGCGTGTTAGCCCCGGAGGATTCCGGTGCGTATTTTTGCGAGGCAGTGCAGTGGATCCTGGACCCATCTGACCAGTGGGAGCGTATTGCACAGAGGACCATGGAGCTGGGAAACCTCGCTGTTCAGCCACTAGCGGATACTCTGTCAGTGAGCGTGGCACCGGCTGGAGAATTGTCTCTGCAGCTCGGCTCTCCTCTCAGGCTCATGTGCCAGGTTTCCGGTGCCGGTTGGTGGAACCGCTCAGCCCTGCTGGTCCAGTGGATGCGGCGTGGTCCGTCTGGGggagtggaggtggaggtggctAAGATGGGGCCTGATGGGGTGGTGAGCTGGGGGGATGACACCAGcaaaggaggaggaggcagtATGGAGAAGGAGGGCAATGGGAAGTTCTCTCTGCGTCGCTTCTCTGCCCACCCTGCTGATGCCGGGGTCTACCGCTGCGCCGTGAGTGTGTACGCAGGGAGGATAAGTCCAGGACCAGCCAGCCCCGCCACCCTCACGCAGTGGTCTGAGGGAGTGACTGTCAGCCTCAGAACTAAAGaGGTCAATGTATCGGCAGTAGTCGAGCTGCCACGCCGTCCACTCCTGAAGCGCGGAAGCACTGCTACCTTGCTGTGCAACGTCTCTGTGGTGACCACCGGTTCGGCCCAGGTAGAAGTGCAGTGGCTGCACAAAAGGGAGGAGCCTGAAAATAAGGAGGTCACGCCCCCAGCTGACACTAAAGGCGTGGTTTTTGCGACTCTGACCTACGATGGAATGTCTCGGATCTACAGTAATGGAAGTGATATGAGCGTGGACCGCATCTCTGCTGGCACCTACAGGCTGCGGATCTTCTCAGCACGTGAGGAAGACCAGGGGTATTACCAGTGCACGGCAGAGGTGTGGGCACAGGATCCCCACGGAGGCTGGTACAAAACCACCAAAAAGGCGGAGTCAGCCATGGTGCGTGTGTACTTGTACGCACGAGTTGCTGACCTCCTGCTTATACCATTGGTGGTTGGAGTATCCTCTGCCCTGTTCGTTGGAGTGGTCATCATCGCCACGGTAACGTGCTGCTTCATGAAACGACTAGCCAGGCAACGGCCCCATATTAGGAAGTAGAGAAGTGGAGAAGTCGACTGCAGAAGCTCCTGAGAAGCCGATTATGGTTAGTCTGTACTGAACTTCACTGGaggagtgaggtaaagtgtggtTTCTGGTGGAAAGACTCGACTGTAAGAGTTAAACTGTAtacagagaagagaaaaaaagagagaagtttTCAGCTTCTCCACTTCCACAACCATCAGCTCCGTCATGCCCACATTATTTCACTCACACTTAACAGTTGGTTTGAACATTAACTCACACAAAGTGTGCACATGCAATGTCTCTGAGGAAGGAGAAGATGACCTAACGGGTAAATAAGTAGTCTTAGTGCCCCTCGTGCACTTCTTCTAAGGGTAGAACCACAATGCACATGActtctttcactctcttgtTTGGAAGCCACAGATGGCCTAACCATGTTTGGTTATGAACATCAAGCTGTTGCCGAATGAACATGGGGCCAAATTTTAAGTCAGCACTTTGCATATTgcatatgatgttttttttgctttcttttgttttctgtgagccacttaaaatatgtgtttttgtgtttgtttttcatgtgtTCTGATATCTTGAAATCCTTGTTTTTTGGTAtgagaaactttttttatatagagtTTGTGAAACCTATATATAAATAGCATGGCGCACATCTTTTACCATAGTTTTTATGGTATTTATGAAACCACCCAAACTACTACTTGTTGCACTGAATTCTGTGAAGTTAAAAACAAGTAATTCCAGGTACTTATTCACTTTcagcccacacacacagctcacacactGTATGCAGTAATCAAGCAACCCCTTGATGGTAGAACCTCATTTCCAGTGGGTGGAATAGactaaatactgtatgtgtggtAGCCCTGTTCTTTAGAGACACAAACAATATACAGATCTAAGCTCCTGTAGTAGTACAGTTAGGAGgtacatgtgtatatataggATAAAAGCTAGCAGTGtccaataatataataataataataataataacagtaaaacaagctgaaaaaaaacaccagaatgAAAGTTTAAATGAAACCACTTTATTATAAGGGACGCAGAAAGTTCTGGTGCTGAAAAGTTGAAAGTCTGCTCCCCTCACGCTGCGATGAAGGACTGTCGGTATGTAAACATCACTTAAGCTGTCGGCAGACACAGCTTGAAATGCAGGGACTCTACTTGAAATGCTGTTGTTGCTCCGTCCACGACAGCTGAGCCAAATCAGGCCAACGTTAAATAGATGCCAAGCTTTTCAACCAAGCCTGCAGGACCAAAGTGGGACGAGGGCCAAAGCGTTCcttctttattctttaaaaagtttagtttttttaatctttaagaAAGATCTTTTTGTTAAAACCCATGTTGAAAACTGTTTTAATGGTACATAATGTTtatatactgtgtgtatgtgttttattggttttaatGGCCTGCCCATGTTTTACTGCTGTTGATTTGTGAATGTGCAAtgcatctctctatctctcatcatttattttatttttatttttttaaagaaggaaatgtgtttttctttgttgtaGCCTGTGTGAATAAGGCAGATCACTGTGCACTCCACTGTGTTTCCTCTGGATTTATCTTTTCTCCTGGACTTGGCAGGTGGGCGTAGCCGCAGTGTTTTAgcttaacacaaaaaaaaaaagaacgggACGACAGCTCAGTCCCTTGTTTGGAGTCAaagcatcatttatttgattGCTCTGCTAGGCAGTGATTTGTTAGGCTAACAGAATCTCCTCTGATTGTTAATGTGGTTGATACATTAGAGAGAGACCCCTGTTTGCTGTTATGTGCTGAAACACTTATTTACAGCGCTTGGCTCATGAAAGCGGATTTATCCTCTTACGCAGTGGAGCCACGTGACCCGGAGTAGAATGGCCAAGTCAGTGAGAGTAACGCAATATTCGCTGGCTCTTAATCCGTGTGTTTACATTTCAGTTACTCCACTCCCTTCAGTGAATTTACCAGCCACTCTGCTGACTAAAGCTGCCCCATGCAGCCCAGTGGCCATTTTGTTCCTCAATCCTGCACTGGTACTGttttattagtgtgtgtttctgtgcatGGACAGATTTGAACtcctgctctcactctctctcttttagctAACCTGTAAAAAGTGCTTCAATTATGGGTTCAAATGTAAAACCGGTTACAGAACAGGTATACAGAAGTTACACAGATACAGATTTACACTGTACACGTACTCGTActgtgttttcctttgttcattgttatttttatgtgaattaaaaaaaaagactagacTGCCAATGTTCATGCTTTCAAAGCTTTGTGCtttgtgatttttcttttttgtatgtaCAACAGATGCCCACAATCCACTGCATTTTGCTTTTTCACAAGTACTGACAGTGACCTGTAATTCTATTCAGTGTCTGCTTGTACTGTGTAATGGTGCTTCAGagtcatgaataaaaaaatcaataaaacaccaCAATAAAAGGCT
>XM_022675629.1
CTGTGCTTTACCGCCGGAGGTGGAGAAGAGCCTGCTGCACGGAGGAACAGGCGGGCTGCTTTAAAACCAGTcgctcttatttattttaataggcGGATGtgtaacttagttacttgaAAAAGGAAATATTAGTATATTAACCGCAGTAATAGGCCATATAGGGAGAAGTACGGGTGTATCGTTAACGGGTTTGGAGCGATATTAAGCTGTAGAGTCGGTTAAACGACTAACCTAacataacgttagctagctaatacGGTTTGAATGGACTGAATGggttaagctagctaacatacggTAACTACGCTAGCCAGATTTAACCGAACGTTTTTCACCgtataattatgtaatttacTTGTGTTTTTCCGATATTAGGTCAATAAATCCTGCGTTATACTTGAAGCAAAGGACTATGTGTGTCAAATGACGCTGTAGTTAGCTGGATAAGGAGAGTTAAAGGCGTGACTGACTGGGCGTACGACCGTGTTTTGGCGACCACAGCAGCCGGAGGACGATGGCACCCAGGCGGCTAACGCTGCTGCTCATCATCGGGTTTGTGTGGGAGTTCCAGCTAGTTGTGTGCCGTGAGGTTACACTTCCCCCTGGTCCAGTGTACCGGGTAGCAGGGTTCCCCATGTCCCTGCCCTGCACTGTTTCAGGGTATGAGGGTCCACGAACGCAGGACTTCGAGTGGTTCCTGTACCGAGAGGATGCAGGCGAGATGCAGATCGGGGTGGTGTCGACCAGAGACCAGGGGTTTCCTTACGCCCCGTTCCAGGGGCGAGTGCGCTCGGGCGAGGTCCGGGTGGAGAGGGACTCTGATGATAAAGCCAGGCTGGTTATTCAGAGGCTCCGCCCAGACGATCAGGGACGATTCGAGTGTTACACACCGAGCACTGATGTGCGATATCAGGGCAGCTATAGCGCCTCAGTGAATGTCAAAGTGATGCCAGACACCTTGTCAATAACGCACTCTCGCATACTGAGTGGTCAGCCCGTCACAGAGGGCACAGAGCTTCAGCTGACGTGTGCAGCATCTGTCCAGTCACCCCAACACACTCACCTATCTGTTACGTTTGGAGTGCGAGGCAGCACTGATTCTGGATCTCTGGGCCACAACCTCAGAGAGATCATCTCCATCGACCGCGAGCTGCGTGTGATCCCAGGCCGAGGCGCCTATGAAAAGAGGTATAAAGATGGGGAGATCAACCTAGAGAAGAAGAGtggagatggagggagggatctgtacgtGCTAACGATGAGCGTGTTAGCCCCGGAGGATTCCGGTGCGTATTTTTGCGAGGCAGTGCAGTGGATCCTGGACCCATCTGACCAGTGGGAGCGTATTGCACAGAGGACCATGGAGCTGGGAAACCTCGCTGTTCAGCCACTAGCGGATACTCTGTCAGTGAGCGTGGCACCGGCTGGAGAATTGTCTCTGCAGCTCGGCTCTCCTCTCAGGCTCATGTGCCAGGTTTCCGGTGCCGGTTGGTGGAACCGCTCAGCCCTGCTGGTCCAGTGGATGCGGCGTGGTCCGTCTGGGggagtggaggtggaggtggctAAGATGGGGCCTGATGGGGTGGTGAGCTGGGGGGATGACACCAGcaaaggaggaggaggcagtATGGAGAAGGAGGGCAATGGGAAGTTCTCTCTGCGTCGCTTCTCTGCCCACCCTGCTGATGCCGGGGTCTACCGCTGCGCCGTGAGTGTGTACGCAGGGAGGATAAGTCCAGGACCAGCCAGCCCCGCCACCCTCACGCAGTGGTCTGAGGGAGTGACTGTCAGCCTCAGAACTAAAGaGGTCAATGTATCGGCAGTAGTCGAGCTGCCACGCCGTCCACTCCTGAAGCGCGGAAGCACTGCTACCTTGCTGTGCAACGTCTCTGTGGTGACCACCGGTTCGGCCCAGGTAGAAGTGCAGTGGCTGCACAAAAGGGAGGAGCCTGAAAATAAGGAGGTCACGCCCCCAGCTGACACTAAAGGCGTGGTTTTTGCGACTCTGACCTACGATGGAATGTCTCGGATCTACAGTAATGGAAGTGATATGAGCGTGGACCGCATCTCTGCTGGCACCTACAGGCTGCGGATCTTCTCAGCACGTGAGGAAGACCAGGGGTATTACCAGTGCACGGCAGAGGTGTGGGCACAGGATCCCCACGGAGGCTGGTACAAAACCACCAAAAAGGCGGAGTCAGCCATGGTGCGTGTGTACTTGTACGCACGAGTTGCTGACCTCCTGCTTATACCATTGGTGGTTGGAGTATCCTCTGCCCTGTTCGTTGGAGTGGTCATCATCGCCACGGTAACGTGCTGCTTCATGAAACGACTAGCCAGGCAACGGCCCCATATTAGGAAGTAGAGAAGTGGAGAAGTCGACTGCAGAAGCTCCTGAGAAGCCGATTATGGTTAGTCTGTACTGAACTTCACTGGaggagtgaggtaaagtgtggtTTCTGGTGGAAAGACTCGACTGTAAGAGTTAAACTGTAtacagagaagagaaaaaaagagagaagtttTCAGCTTCTCCACTTCCACAACCATCAGCTCCGTCATGCCCACATTATTTCACTCACACTTAACAGTTGGTTTGAACATTAACTCACACAAAGTGTGCACATGCAATGTCTCTGAGGAAGGAGAAGATGACCTAACGGGTAAATAAGTAGTCTTAGTGCCCCTCGTGCACTTCTTCTAAGGGTAGAACCACAATGCACATGActtctttcactctcttgtTTGGAAGCCACAGATGGCCTAACCATGTTTGGTTATGAACATCAAGCTGTTGCCGAATGAACATGGGGCCAAATTTTAAGTCAGCACTTTGCATATTgcatatgatgttttttttgctttcttttgttttctgtgagccacttaaaatatgtgtttttgtgtttgtttttcatgtgtTCTGATATCTTGAAATCCTTGTTTTTTGGTAtgagaaactttttttatatagagtTTGTGAAACCTATATATAAATAGCATGGCGCACATCTTTTACCATAGTTTTTATGGTATTTATGAAACCACCCAAACTACTACTTGTTGCACTGAATTCTGTGAAGTTAAAAACAAGTAATTCCAGGTACTTATTCACTTTcagcccacacacacagctcacacactGTATGCAGTAATCAAGCAACCCCTTGATGGTAGAACCTCATTTCCAGTGGGTGGAATAGactaaatactgtatgtgtggtAGCCCTGTTCTTTAGAGACACAAACAATATACAGATCTAAGCTCCTGTAGTAGTACAGTTAGGAGgtacatgtgtatatataggATAAAAGCTAGCAGTGtccaataatataataataataataataataacagtaaaacaagctgaaaaaaaacaccagaatgAAAGTTTAAATGAAACCACTTTATTATAAGGGACGCAGAAAGTTCTGGTGCTGAAAAGTTGAAAGTCTGCTCCCCTCACGCTGCGATGAAGGACTGTCGGTATGTAAACATCACTTAAGCTGTCGGCAGACACAGCTTGAAATGCAGGGACTCTACTTGAAATGCTGTTGTTGCTCCGTCCACGACAGCTGAGCCAAATCAGGCCAACGTTAAATAGATGCCAAGCTTTTCAACCAAGCCTGCAGGACCAAAGTGGGACGAGGGCCAAAGCGTTCcttctttattctttaaaaagtttagtttttttaatctttaagaAAGATCTTTTTGTTAAAACCCATGTTGAAAACTGTTTTAATGGTACATAATGTTtatatactgtgtgtatgtgttttattggttttaatGGCCTGCCCATGTTTTACTGCTGTTGATTTGTGAATGTGCAAtgcatctctctatctctcatcatttattttatttttatttttttaaagaaggaaatgtgtttttctttgttgtaGCCTGTGTGAATAAGGCAGATCACTGTGCACTCCACTGTGTTTCCTCTGGATTTATCTTTTCTCCTGGACTTGGCAGGTGGGCGTAGCCGCAGTGTTTTAgcttaacacaaaaaaaaaaagaacgggACGACAGCTCAGTCCCTTGTTTGGAGTCAaagcatcatttatttgattGCTCTGCTAGGCAGTGATTTGTTAGGCTAACAGAATCTCCTCTGATTGTTAATGTGGTTGATACATTAGAGAGAGACCCCTGTTTGCTGTTATGTGCTGAAACACTTATTTACAGCGCTTGGCTCATGAAAGCGGATTTATCCTCTTACGCAGTGGAGCCACGTGACCCGGAGTAGAATGGCCAAGTCAGTGAGAGTAACGCAATATTCGCTGGCTCTTAATCCGTGTGTTTACATTTCAGTTACTCCACTCCCTTCAGTGAATTTACCAGCCACTCTGCTGACTAAAGCTGCCCCATGCAGCCCAGTGGCCATTTTGTTCCTCAATCCTGCACTGGTACTGttttattagtgtgtgtttctgtgcatGGACAGATTTGAACtcctgctctcactctctctcttttagctAACCTGTAAAAAGTGCTTCAATTATGGGTTCAAATGTAAAACCGGTTACAGAACAGGTATACAGAAGTTACACAGATACAGATTTACACTGTACACGTACTCGTActgtgttttcctttgttcattgttatttttatgtgaattaaaaaaaaagactagacTGCCAATGTTCATGCTTTCAAAGCTTTGTGCtttgtgatttttcttttttgtatgtaCAACAGATGCCCACAATCCACTGCATTTTGCTTTTTCACAAGTACTGACAGTGACCTGTAATTCTATTCAGTGTCTGCTTGTACTGTGTAATGGTGCTTCAGagtcatgaataaaaaaatcaataaaacaccaCAATAAAAGGCT

Function

NR:

description
immunoglobulin superfamily member 8-like

GO: NA

KEGG:

id description
K06730 IGSF8, CD316; immunoglobulin superfamily, member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015606925.2 False 4781 mRNA 0.47 7 28271821 28292098
XM_022675629.1 True 4859 mRNA 0.47 6 28271821 28292098

Neighbor

gene id symbol gene type direction distance location
sp7 sp7 coding upstream 42806 28224659 ~ 28229015 (+)
LOC103025927 NA coding upstream 72941 28172574 ~ 28198880 (+)
stmn3 stmn3 coding upstream 104686 28154107 ~ 28167135 (+)
arfrp1 arfrp1 coding upstream 122400 28141928 ~ 28149421 (+)
kcnq2 kcnq2,LOC100537363 coding upstream 144585 28041772 ~ 28127236 (+)
LOC111193756 NA coding downstream 49889 28341987 ~ 28349481 (+)
LOC111193755 NA coding downstream 59885 28351983 ~ 28361479 (+)
dctn2 dctn2 coding downstream 137143 28429241 ~ 28454020 (+)
ddit3 ddit3,LOC106582666 coding downstream 194610 28486708 ~ 28492312 (+)
arhgap9 arhgap9 coding downstream 225533 28517631 ~ 28589490 (+)
G114159 NA non-coding upstream 54386 28217207 ~ 28217435 (+)
G114154 NA non-coding upstream 99832 28171511 ~ 28171989 (+)
G114127 NA non-coding upstream 141529 28066690 ~ 28130292 (+)
G114110 NA non-coding upstream 265472 28005507 ~ 28006349 (+)
G114026 NA non-coding upstream 605846 27661540 ~ 27665975 (+)
G114168 NA non-coding downstream 5396 28297494 ~ 28297775 (+)
G114162 LOC108431801 non-coding downstream 20542 28312640 ~ 28316397 (+)
G114191 NA non-coding downstream 113111 28405209 ~ 28455339 (+)
LOC111193758 NA non-coding downstream 442292 28734390 ~ 28736858 (+)
LOC111193757 NA non-coding downstream 444767 28736865 ~ 28755521 (+)
LOC103037845 necab3,LOC108431835,LOC108271560,LOC107666033,LOC107553901,LOC107740282,LOC107587636,LOC107744391 other upstream 782299 27391014 ~ 27489522 (+)
G113979 snrpb,LOC101173217 other upstream 919377 27347449 ~ 27352444 (+)
ube2o ube2o other upstream 2874838 25342153 ~ 25396983 (+)
G113642 acox1 other upstream 3009600 25261386 ~ 25262221 (+)
LOC103030782 NA other upstream 3017691 25250384 ~ 25254130 (+)
LOC103044650 LOC108427558 other downstream 915645 29207743 ~ 29281311 (+)
LOC111193669 NA other downstream 1590273 29882371 ~ 29887978 (+)
G114698 NA other downstream 1834237 30126335 ~ 30129896 (+)
G114841 NA other downstream 2558211 30850309 ~ 30880553 (+)
G115024 ngf,LOC103031633,LOC105909845 other downstream 3601187 31893285 ~ 31894351 (+)

Expression


Co-expression Network