LOC103032776


Basic Information

Item Value
gene id LOC103032776
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 29620360 ~ 29630245 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675650.1
CACCTGAGGACGTCTGTTTTGGTGAACTTGGAGTGATATAAAAACAGAGCTTATTTTTCGTAGGCtgggctaaaaaaaaacatgataatttAAACTCCAGTTTGAGACAGGATCTACAGGATGAGGCTGCGAGGGATTGTCTCTCTTTTTATACTGGTGGTTAGCCTCATCTTAGTCTGGGTCTTCTTTGTTGATAAGACGTATCTCTGGGATCTTCAGGAGAATGAAAAACATCGGTTGCAGCGCAAAGAGCTTCCTCGATCAGACTGTGATCCTCCAGTTCTGTTTCAGTCTCACCCAGGCTGCTGTCCTCAGAAAGTCTGCGCTGTAGATCACTACCCTTTCTTTATCCGCAGTGGAGTAGCCAACGTGGTGGGACCAAAGATCTGCTTCAACAACTCCATTATAATGGGAGGGATAATGAATAATATCGGACAGGGTCTGAACATTGTGGTGGTGAAGGgtgaaACTGGAGAGATATTGAAGAGCAACTACTTCAACGCCCACACCGGGGAATTACTTGAGTTTCTAAAGTCAATACAGGCTGGAAATATAGTTTGTGTGGCTTCATATGAAGATCCGGCAGAAGTGTTGACTGATGAAATCAGGGAGATTTTTATCAGGTTAGGAAGCACAATGAGCCGCTCGGTGAAGAGGCGGGACACCTGGGTGTTTGTCGGAGCTGAAGGGATAGTTAAGGAAAGTCCTTTTGAGAAGctctccgctaatgatGAGAAGAGCAACGTGTATGGAGGCTGGCCAGAGATGAGGGAGGTGGGTGGCTGCTTTCCCAGAAAGATCTGACTGACACTAAATGAGCATGTTCTGCAGCAGCCAACGGGATCGTTAGAAACACGGAGCTTTTCAAACGTGGGATTTAGAAGCTTTGAAGTTTGGAAGTGCTGCAAAGTGTTCACATATGGAAGCCTGCATGTGACGGCCATGTACTGCCCACAGCCTGCGCATCCTGCTGACAGAGTCACAGTACCTCACATCAAATGTTCACCATCTTTCAGAAATAAATTGATCAAAAAAGTATGGTATTATTGTTACTTTATGAGACAATGTTATAGATTTTAATTAACAAGTCTTTTCTTACACTCTTTCTACATTCTGTCTCTCGTGTCTGTTTGTGTGCTCTTTTTATTGAATTCCGTCTATTTCTCTTTAACTGTTGCAATCCATGTCTGCAGTtgaaagaaataattattttaattatttaaacatattaaaaatggttaaaatttatgttttttaatagtttatgcattttaattattcattgaaCAGTTTTCTATCTGActtcatattattatatatttctcaaATTGTCTCCATTCTTATCTTAGTTAAAGCAtaagctgtccaccctgtcatggtaaaatttcaaggcaattaaaatatattgagaggatcaaaatatatttatatgtatttgatGTGTATTTCTCATTCCCTTATTTCCACTTATTTCATATATGAATTATGCGTTTATAAAAGCTAATACATGGCTTACTTTGATCAAAAGCAATAtaaccttttattatttttttcattaaaagcatttaaaggCACCATGAGTCTTGGCCACTTTTGGGAAGAATGTATAGCTGTCTGCATAGCtgtgtacacaaacacatagtGAAGGcacaacacactctctcttactctgttttctctctctcagtttcaaTTAAAGGGCCCTATTGTAGAAATCTATAGGCATGCTGTCAACCGTGCACcaatgcagcttgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675650.1 True 1756 mRNA 0.39 9 29620360 29630245

Neighbor

gene id symbol gene type direction distance location
c13h3orf67 NA coding upstream 10804 29559731 ~ 29609556 (+)
rbp7 rbp7,LOC107713528,LOC107666991,LOC107555975,LOC107708738 coding upstream 348911 29267706 ~ 29271449 (+)
h6pd h6pd coding upstream 361277 29245281 ~ 29259083 (+)
shmt2 shmt2,LOC103359782,LOC106515133 coding upstream 488297 29090843 ~ 29132063 (+)
nxph4 nxph4 coding upstream 534916 28994206 ~ 29085444 (+)
LOC111193761 LOC108427564 coding downstream 680 29630925 ~ 29638287 (+)
LOC103043238 pbrm1l,LOC108427561 coding downstream 52405 29682650 ~ 29697639 (+)
stau1 stau1 coding downstream 68355 29698600 ~ 29709786 (+)
LOC103032161 LOC108427567 coding downstream 82240 29712485 ~ 29728337 (+)
LOC103040768 LOC103040768,LOC108427541 coding downstream 269319 29899564 ~ 29917753 (+)
G114480 NA non-coding upstream 21280 29521807 ~ 29599080 (+)
G114474 NA non-coding upstream 62669 29458027 ~ 29557691 (+)
G114475 NA non-coding upstream 144793 29474846 ~ 29475567 (+)
G114438 NA non-coding upstream 335582 29230207 ~ 29284778 (+)
G114439 tardbp,LOC108427558,LOC105025427 non-coding upstream 337946 29281458 ~ 29282414 (+)
G114623 NA non-coding downstream 202951 29833196 ~ 29833502 (+)
G114627 NA non-coding downstream 209017 29839262 ~ 29839720 (+)
G114640 NA non-coding downstream 328353 29958598 ~ 29959049 (+)
G114643 NA non-coding downstream 339690 29969935 ~ 29970956 (+)
G114647 NA non-coding downstream 349369 29979614 ~ 29979838 (+)
LOC103044650 LOC108427558 other upstream 339049 29207743 ~ 29281311 (+)
LOC103037845 necab3,LOC108431835,LOC108271560,LOC107666033,LOC107553901,LOC107740282,LOC107587636,LOC107744391 other upstream 2130838 27391014 ~ 27489522 (+)
G113979 snrpb,LOC101173217 other upstream 2267916 27347449 ~ 27352444 (+)
ube2o ube2o other upstream 4223377 25342153 ~ 25396983 (+)
G113642 acox1 other upstream 4358139 25261386 ~ 25262221 (+)
LOC111193669 NA other downstream 252126 29882371 ~ 29887978 (+)
G114698 NA other downstream 496090 30126335 ~ 30129896 (+)
G114841 NA other downstream 1220064 30850309 ~ 30880553 (+)
G115024 ngf,LOC103031633,LOC105909845 other downstream 2263040 31893285 ~ 31894351 (+)
LOC103031324 kcna3a,LOC108427600,LOC108271529,LOC107729772,LOC107666172,LOC107708155,LOC107554199,LOC107685799 other downstream 2322769 31953014 ~ 31962885 (+)

Expression


Co-expression Network