os9 (os9,LOC107711069,LOC107582707,LOC107673576,LOC107733587,LOC107585136)


Basic Information

Item Value
gene id os9
gene name os9,LOC107711069,LOC107582707,LOC107673576,LOC107733587,LOC107585136
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 36947965 ~ 36961567 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675783.1
GTGAACTGACAACGCCAGTTTGGGATGTGAGGGAAACATGGCTGCTTCCTTGGTTAGGTGTTTGAGGGGgctgtatgttttgtttttgatatGTCTCCTTTTCGCCTCTGCTTTCCTGAATTTAGAggaattaaatgaaatgaaatatggCATCCAGATTCTGCCCGACCCGGTTATCATGGGCCAGGTGGAGGATGTAATGTTGGTCTCCAACAAGTACAAGCAGCTGTATGAGTGTCGCTTACCTGCCCAGGCAGTCCGCTTCCACCAGGATCCTGTACCAGAGGCTGACTCTCAGGGCTACAGTGGACCGGGGATCACTGAGCTCCTGAAGCCCATGCAGACTGCTCCCTGCCTTGTCAAGACCAAAGACTGGTGGACCTATGAGTTCTGTTATGGCCAGCACATTCGACAGTATCATTTGGAAGATTCAGAAATCAAGGGTGATGTCCTCTTCCTGGGTTATTTTGAATCAGAATTTGACTGGACCAATGAAACTGCAAAGGCCACTAAACAACACAAGCTGAAGAGATACCACAGCCAGTCTTATATCAATGGTTCCAAGTGTGATCTAAATGGCAGCCCAAGGGAGTCAGAAGTCAGGTTTGTTTGTGAGGAGAGTTCAAGTGATTTTATTGCTCGTGTGGATGAACCTCAGTCCTGTCGCTATGTTCTCACCATACACACCTCTCGCACGTGTCAACACCCACTCCTGCGCCCACCCTCCTCTGCCAAACCACAGGGCATTGTGTGTCAGCCTGCTCTCAGTGCTCAGCAGTACATGGACTATGTCAAAGCGCAAGTCTCTGACACTAAACGTAAAGTGGAGCAGATCTCAGAAGAGCTAAGAAACCTGGATCAAATTTTGTCCAAAGATCAAACCAGTGAGACGACAGCAGCAGCAAATGACAAAATAGAAGAAGAGTCTGCAGCATCCAGTTATAAGCTGGCCTCAGAGACTGAGGATAAAGAGGCTGTAGAGGAAGAGGCTGAATTGGCCAATGTGGAGCCAGATGATAAAGATTTCTGGGATGGTGTCACCAAACCAGAGAGTACAGATCAACAGACACCTGAAGCACAGGAGTTTGATGATTCTCTGGAAAACCAGCCTCAAGACAATGACCTATTCGGGGAggaaaagtttaattttaaaataatcacaGACCCTGCTGACCTAATGAAGTTTGTTCAGCACCTCAGGGAGAGCAACAAAAAAaagGCACATcacaaaaatgagaaaagcCAGTCACCTTCACAAAAAAGTGAACCTGAGGAGGCAAAGATGAAAGAAACCGAGGTTGACAAAGAGGAAGGAGATGAAGATGAGCAACTTCTTAAGGAGTTTGAGGAAGAAATGGCTGATCTGACTGTGCCTCCTTCCAAGAttgaagaaataaaagaagaaatggAGAAAGAGTTTGATAACATCATAGAAGAGGCTCAGCAGGAATTAGAATCAGAGGGCCTGAAGGGGGAATTTGATCGGTCCCAAGCAACTCAGACTTTGGAGAACACTTTAGGCAAACTTCTGGATCGTTTGGAGGATAGGACGGGAGAGGATGCAGAATCAGAAGATACAGAGGCTCATACAAacccacaaaaaaacacacaagatCCAcctgagacagaaacagacTCTGCTAGTGGTGGTCCCAGTCTTGTCCCCAAAACCCCAGCACGGGAGCTTGGCAATGGGGAGCAGGTAAAAATCAGGGTGACTAAGTATAAGGTGGGTGGAGACGTGGCTGCGGGAGCGGTTGCCGGGGGCGATGGTCGTGAGGGAGGTGTGCAGGTGCGAGAGCTGGGCGAAAGTGACCCCCAGTGGCAGCAGATTAAGGATGTGGTCACAGAGCAGCTAGGAAAGGCTGGCATCAAGGCCGAAGGCAAGATTGAGGTAAAAATCTTAACGCGTAAAACAGCAGAGGAAGCCGGAGACCAGTGGCTAAGTGAGGAGGATACCAAATCTTTTAGAGAACTACTCATCAACCTACTGACTGGAGGCACAGAGGAAGTGTACAAAGAGCAAAAGAGGCAGCAGGAGTTGGAGAACAATTACAGATTTGTTTGGGGAGAAAAACAGGAAGAGAGTCAGTCTTCAGGAACCAGCGATTCAGATGAACTCGATTTCTGAACCTGGATTTCTCTTCAATTTCCTTTCTTCAGACCTCAGGGAGGTAgaagaaataaactaataaactgtACATTGGAATACAAAAGAACTTTGGACTCTTTAGCTCCTGTACAGCCTTTGCTTGGACTGCAGTTTTTTGCAAACACTGTGGTTGTCCTTTTTTCATGCTGTGACAATTTGGACAATATGTGGCTTAATCATAAAACTCTGAATGAAAGTCTCATGAAACCTGAGAGGGGAATTAAAGCCTCTCACACTCCAGAATGATGCGTTCCCATTGTAAAAGCACCCGTGAACAATAAATCCTGGAGTACATTTTCTTATGTTATAAACAAACATACTGAATGTTTGATACAACTGTTACTGTTATGtaacagtattttttctttgcagTTTATTGCTAATGCTGCCTACTTCCTGAACCCATGCGATGCTAATTACAtttgtatgtgtctgtgtggtttAGATGTGATGATATAACAGATTTTGGACTGTTAGTAATTGTAATATCTGTTCTGAGAGTGGTGAGTGCTGTACAGGTAGATGTACAGATAGATGTTCTATTTCACAATGAAGGGCTGTTCTACTTTGGCTTTTGTTTCATGCATTTTAACAATCTCTAAGGTTTCCCATGTGATTATTGGATCACTGACACCTGGAGGAATAGGTGATGTTCTGAATCCAATACAGGCGTATTTTGCTGTGAGAGAATCTAAGATATTGCAAAATCTTGAGTGAGATTATAGGACAGAgtttattgcattttaaataaatgagccctgtttaaaatgttatcCTTGATTATATCAAATAATCAAGACACATaggaaaaatatgtaaaacaatGTTGTCTTCTACAGTTGGGACACTTTATTGTTGACATATAATGGTATGCATACTTTCACTGAGCACTTTTTATGAACCCTAATACTGGATGGGGCATGCTCTCAAAACAGCCTCATTTTACATTGGCGTGGATCCTGTTGACATGATTGCTTTGTGCAATTCCTACAGATTCCACAAGGGTTGTATTGGATTTAGACCTGGTGACGAGGAAGGCCACTGACAAGCTCATTGTTATGTCTCAGAAATAAATGACCTGACTTTTGCTGTGCAACATAGTGGGTGCATTATCATTGTGCAAGTAGCCATTAGAAGAATTGGTCATGAAGGGGTACATAAGGTCAGCTCACCACAATTATACTGAGTGGTTATCTGAGTTCCTGTAGCATTGTGTTGGATTAAACCAGTCTGCATATTGTTCATTGACCTTTCTCATCAACAAGGTGTTTCTATCTGCAGTATTTCTACTcactggatgttttttttttatattacataattCTGAGTAAACTGTACAAACTTTTTCTGCTGAAAATCCAGGAGATCAGCTGTTCTAGAAATACTCAGAAATACTAAAATCTGTTAACCTGGCACCAACAGCTATGCCACATTCCAAATGACTGAGATCTTATTGTTGCCCCTTCTGTTGGTAAACGAAAACAATGTGCTGAGTCATGATTCTATGCATTTTTATGCAGTGCATTGCTGCCACATGATTGGCTGCTCAGATGATATTGCACAAATCAGTAGGTGTACAGGTCTTCTTAATAAAGTGCTCAGTGAATATATGCTGCTGACTTGACCcagtacaaatacaaatatagtcTGTAATTAATGACAAGGCAAACTTTTAATAGCATATCAGATTCTGATGCCCAAGCTCCATCCCATGTTTGGACTGCTTTAATAAATATAGAGACAGTGCTATAATCAATTATTTTCAGTCTATTTTGCGCATTGTTCCCAATTCATTGATGCTAAATTAGGTTTGGTGAGCTTAATGCCATACTATCTTGTTTAGCCCAAATTACTGTGCAATTACTGCTGCACGTTGCGACCAATAAAATACAGGTTTTTGAGATTTTATTGATCATTCTCTCTTGTCCAAGGAAATGAGCTGTACAGCAGGATTGTTTTTGCacataaattgtgtttttttttctcccaaacAGGCTTGTAGCCAAACAGCCTCTCAAAGAATATGACTGCTATGGATGTGagatatttaatatgtattttctatttgtCTTTTGCACAGTCCCAGCAGATAAGGGCTCTCTCTGTGTAAACTTTGTGAATAGATCTTTAGTAGTTTGTACATATCTGTGATATTGCTGGTTCTCTGTTCTGCTTGCCATCAGTGGCATAACCCCAGTAAAGCTCAATCCAAGCACA
>XM_022675784.1
TGAACTGACAACGCCAGTTTGGGATGTGAGGGAAACATGGCTGCTTCCTTGGTTAGGTGTTTGAGGGGgctgtatgttttgtttttgatatGTCTCCTTTTCGCCTCTGCTTTCCTGAATTTAGAggaattaaatgaaatgaaatatggCATCCAGATTCTGCCCGACCCGGTTATCATGGGCCAGGTGGAGGATGTAATGTTGGTCTCCAACAAGTACAAGCAGCTGTATGAGTGTCGCTTACCTGCCCAGGCAGTCCGCTTCCACCAGGATCCTGTACCAGAGGCTGACTCTCAGGGCTACAGTGGACCGGGGATCACTGAGCTCCTGAAGCCCATGCAGACTGCTCCCTGCCTTGTCAAGACCAAAGACTGGTGGACCTATGAGTTCTGTTATGGCCAGCACATTCGACAGTATCATTTGGAAGATTCAGAAATCAAGGGTGATGTCCTCTTCCTGGGTTATTTTGAATCAGAATTTGACTGGACCAATGAAACTGCAAAGGCCACTAAACAACACAAGCTGAAGAGATACCACAGCCAGTCTTATATCAATGGTTCCAAGTGTGATCTAAATGGCAGCCCAAGGGAGTCAGAAGTCAGGTTTGTTTGTGAGGAGAGTTCAAGTGATTTTATTGCTCGTGTGGATGAACCTCAGTCCTGTCGCTATGTTCTCACCATACACACCTCTCGCACGTGTCAACACCCACTCCTGCGCCCACCCTCCTCTGCCAAACCACAGGGCATTGTGTGTCAGCCTGCTCTCAGTGCTCAGCAGTACATGGACTATGTCAAAGCGCAAGTCTCTGACACTAAACGTAAAGTGGAGCAGATCTCAGAAGAGCTAAGAAACCTGGATCAAATTTTGTCCAAAGATCAAACCAGTGAGACGACAGCAGCAGCAAATGACAAAATAGAAGAAGAGTCTGCAGCATCCAGTTATAAGCTGGCCTCAGAGACTGAGGATAAAGAGGCTGTAGAGGAAGAGGCTGAATTGGCCAATGTGGAGCCAGATGATAAAGATTTCTGGGATGGTGTCACCAAACCAGAGAGTACAGATCAACAGACACCTGAAGCACAGGAGTTTGATGATTCTCTGGAAAACCAGCCTCAAGACAATGACCTATTCGGGGAggaaaagtttaattttaaaataatcacaGACCCTGCTGACCTAATGAAGTTTGTTCAGCACCTCAGGGAGAGCAACAAAAAAaagGCACATcacaaaaatgagaaaagcCAGTCACCTTCACAAAAAAGTGAACCTGAGGAGGCAAAGATGAAAGAAACCGAGGTTGACAAAGAGGAAGGAGATGAAGATGAGCAACTTCTTAAGGAGTTTGAGGAAGAAATGGCTGATCTGACTGTGCCTCCTTCCAAGAttgaagaaataaaagaagaaatggAGAAAGAGTTTGATAACATCATAGAAGAGGCTCAGCAGGAATTAGAATCAGAGGGCCTGAAGGGGGAATTTGATCGGTCCCAAGCAACTCAGACTTTGGAGAACACTTTAGGCAAACTTCTGGATCGTTTGGAGGATAGGACGGGAGAGGATGCAGAATCAGAAGATACAGAGGCTCATACAAacccacaaaaaaacacacaagatCCAcctgagacagaaacagacTCTGCTAGTGGTGGTCCCAGTCTTGTCCCCAAAACCCCAGGCAAGATTGAGGTAAAAATCTTAACGCGTAAAACAGCAGAGGAAGCCGGAGACCAGTGGCTAAGTGAGGAGGATACCAAATCTTTTAGAGAACTACTCATCAACCTACTGACTGGAGGCACAGAGGAAGTGTACAAAGAGCAAAAGAGGCAGCAGGAGTTGGAGAACAATTACAGATTTGTTTGGGGAGAAAAACAGGAAGAGAGTCAGTCTTCAGGAACCAGCGATTCAGATGAACTCGATTTCTGAACCTGGATTTCTCTTCAATTTCCTTTCTTCAGACCTCAGGGAGGTAgaagaaataaactaataaactgtACATTGGAATACAAAAGAACTTTGGACTCTTTAGCTCCTGTACAGCCTTTGCTTGGACTGCAGTTTTTTGCAAACACTGTGGTTGTCCTTTTTTCATGCTGTGACAATTTGGACAATATGTGGCTTAATCATAAAACTCTGAATGAAAGTCTCATGAAACCTGAGAGGGGAATTAAAGCCTCTCACACTCCAGAATGATGCGTTCCCATTGTAAAAGCACCCGTGAACAATAAATCCTGGAGTACATTTTCTTATGTTATAAACAAACATACTGAATGTTTGATACAACTGTTACTGTTATGtaacagtattttttctttgcagTTTATTGCTAATGCTGCCTACTTCCTGAACCCATGCGATGCTAATTACAtttgtatgtgtctgtgtggtttAGATGTGATGATATAACAGATTTTGGACTGTTAGTAATTGTAATATCTGTTCTGAGAGTGGTGAGTGCTGTACAGGTAGATGTACAGATAGATGTTCTATTTCACAATGAAGGGCTGTTCTACTTTGGCTTTTGTTTCATGCATTTTAACAATCTCTAAGGTTTCCCATGTGATTATTGGATCACTGACACCTGGAGGAATAGGTGATGTTCTGAATCCAATACAGGCGTATTTTGCTGTGAGAGAATCTAAGATATTGCAAAATCTTGAGTGAGATTATAGGACAGAgtttattgcattttaaataaatgagccctgtttaaaatgttatcCTTGATTATATCAAATAATCAAGACACATaggaaaaatatgtaaaacaatGTTGTCTTCTACAGTTGGGACACTTTATTGTTGACATATAATGGTATGCATACTTTCACTGAGCACTTTTTATGAACCCTAATACTGGATGGGGCATGCTCTCAAAACAGCCTCATTTTACATTGGCGTGGATCCTGTTGACATGATTGCTTTGTGCAATTCCTACAGATTCCACAAGGGTTGTATTGGATTTAGACCTGGTGACGAGGAAGGCCACTGACAAGCTCATTGTTATGTCTCAGAAATAAATGACCTGACTTTTGCTGTGCAACATAGTGGGTGCATTATCATTGTGCAAGTAGCCATTAGAAGAATTGGTCATGAAGGGGTACATAAGGTCAGCTCACCACAATTATACTGAGTGGTTATCTGAGTTCCTGTAGCATTGTGTTGGATTAAACCAGTCTGCATATTGTTCATTGACCTTTCTCATCAACAAGGTGTTTCTATCTGCAGTATTTCTACTcactggatgttttttttttatattacataattCTGAGTAAACTGTACAAACTTTTTCTGCTGAAAATCCAGGAGATCAGCTGTTCTAGAAATACTCAGAAATACTAAAATCTGTTAACCTGGCACCAACAGCTATGCCACATTCCAAATGACTGAGATCTTATTGTTGCCCCTTCTGTTGGTAAACGAAAACAATGTGCTGAGTCATGATTCTATGCATTTTTATGCAGTGCATTGCTGCCACATGATTGGCTGCTCAGATGATATTGCACAAATCAGTAGGTGTACAGGTCTTCTTAATAAAGTGCTCAGTGAATATATGCTGCTGACTTGACCcagtacaaatacaaatatagtcTGTAATTAATGACAAGGCAAACTTTTAATAGCATATCAGATTCTGATGCCCAAGCTCCATCCCATGTTTGGACTGCTTTAATAAATATAGAGACAGTGCTATAATCAATTATTTTCAGTCTATTTTGCGCATTGTTCCCAATTCATTGATGCTAAATTAGGTTTGGTGAGCTTAATGCCATACTATCTTGTTTAGCCCAAATTACTGTGCAATTACTGCTGCACGTTGCGACCAATAAAATACAGGTTTTTGAGATTTTATTGATCATTCTCTCTTGTCCAAGGAAATGAGCTGTACAGCAGGATTGTTTTTGCacataaattgtgtttttttttctcccaaacAGGCTTGTAGCCAAACAGCCTCTCAAAGAATATGACTGCTATGGATGTGagatatttaatatgtattttctatttgtCTTTTGCACAGTCCCAGCAGATAAGGGCTCTCTCTGTGTAAACTTTGTGAATAGATCTTTAGTAGTTTGTACATATCTGTGATATTGCTGGTTCTCTGTTCTGCTTGCCATCAGTGGCATAACCCCAGTAAAGCTCAATCCAAGCACA

Function

symbol description
os9 Predicted to be involved in retrograde protein transport, ER to cytosol and ubiquitin-dependent ERAD pathway. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum lumen. Orthologous to human OS9 (OS9 endoplasmic reticulum lectin).

NR:

description
protein OS-9-like isoform X1

GO: NA

KEGG:

id description
K10088 OS9; protein OS-9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675783.1 True 4369 mRNA 0.42 15 36947965 36961567
XM_022675784.1 False 4161 mRNA 0.41 14 36947966 36961567

Neighbor

gene id symbol gene type direction distance location
LOC103040047 NA coding upstream 28422 36904618 ~ 36919543 (+)
LOC103040875 krt4,LOC108440969,LOC107667388,LOC106565226,LOC107711067 coding upstream 65560 36876648 ~ 36882405 (+)
LOC103041493 NA coding upstream 92003 36849647 ~ 36855962 (+)
LOC103042615 scn8ab,LOC108440919,LOC100304602 coding upstream 128872 36747556 ~ 36819093 (+)
LOC103043543 LOC103043543,LOC108440897,LOC108271751,LOC107582700,LOC107667378 coding upstream 226068 36714888 ~ 36721897 (+)
LOC103039123 LOC108441012,LOC105017220,LOC105897894 coding downstream 659 36962226 ~ 36971698 (+)
apof NA coding downstream 24365 36985932 ~ 36990049 (+)
LOC103021407 LOC108441035,LOC108272207 coding downstream 32415 36993982 ~ 37010190 (+)
LOC103046153 eif4b,LOC108441049 coding downstream 79799 37041366 ~ 37050408 (+)
LOC103046872 NA coding downstream 95874 37057441 ~ 37088492 (+)
G116378 NA non-coding upstream 38316 36909203 ~ 36909649 (+)
G116360 NA non-coding upstream 104727 36840841 ~ 36843238 (+)
G116353 LOC108440955,LOC108272218,LOC107711062,LOC100304745,LOC107585131,LOC107673602,LOC103386112 non-coding upstream 113443 36833489 ~ 36834522 (+)
G116359 NA non-coding upstream 116389 36823464 ~ 36831576 (+)
G116356 LOC103042096,LOC108440962 non-coding upstream 120097 36825294 ~ 36827868 (+)
G116466 NA non-coding downstream 49886 37011453 ~ 37014185 (+)
G116511 NA non-coding downstream 136687 37098254 ~ 37098533 (+)
G116507 NA non-coding downstream 160123 37121690 ~ 37124435 (+)
G116532 LOC108441132,LOC107711082,LOC107585147,LOC107673595,LOC107685285,LOC107733606,LOC107582800 non-coding downstream 229503 37191070 ~ 37199094 (+)
G116539 NA non-coding downstream 290640 37252207 ~ 37252770 (+)
LOC103044253 LOC108440873 other upstream 234081 36657392 ~ 36713884 (+)
LOC103024058 LOC103024058,LOC108440764,LOC107748389,LOC107711047,LOC107673509,LOC107585116,LOC106583201 other upstream 588188 36342985 ~ 36359777 (+)
G116103 prkcda,LOC103030273,LOC108440644,LOC107582675,LOC107667398,LOC107721176,LOC107673500,LOC107712078,LOC108271968 other upstream 959905 35982119 ~ 35988060 (+)
tomm6 NA other upstream 980087 35958543 ~ 35967878 (+)
G115931 NA other upstream 1213606 35730379 ~ 35734359 (+)
LOC103045245 vdrb,LOC108272216,LOC107585146,LOC107673565,LOC107711077,LOC108441087 other downstream 138447 37100014 ~ 37121327 (+)
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289 other downstream 563284 37524851 ~ 37612322 (+)
LOC103036266 LOC108441345 other downstream 1428710 38390277 ~ 38394530 (+)
G116997 NA other downstream 2397304 39358871 ~ 39359388 (+)
LOC103033994 LOC103033994,LOC108441647 other downstream 3837904 40799471 ~ 40808545 (+)

Expression


Co-expression Network