LOC103043103 (cnga3a,LOC108441138,LOC107585144,LOC107711084,LOC107733584,LOC108271559,LOC106560639)


Basic Information

Item Value
gene id LOC103043103
gene name cnga3a,LOC108441138,LOC107585144,LOC107711084,LOC107733584,LOC108271559,LOC106560639
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 37221320 ~ 37233209 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675789.1
TGAGAGAAGTCTGCGTGAGGAGTAGTGGATGCAGTAATACCTGAAGCTGGGAATGCGGTGATGGATTAATATGACCCGGTTTCACACAGGAAAAAGTGGATTATGGCTCAAAAAACGCATCGTGGAATTTGCTTCTCCAGAATGGGATTTTACCGAGTCACATTGAGAGGAACTTGAGGATTAAGAGGCGTTCAGACCTGGAGGAGAAtcagcacagtttaatctgtCCATGAAGTAAATAAGAAACTTTTGTTGTCTCACTGAAGCCTCGCTGTGTTTTAGCAGGAGCTGCATGTCCTGGCAGCAGTGAGCTTTAACAGTGAGAATGGCGAAAATCTGCACCGCAGAGTCGTACCCGTCCCGTCACAGGGTATCAGTTCGAGCCTCAGACGATGAAGTGGACCAAACTGATTACGGTGACAACagGGCACCGTCCATATGTGACGACACTGCCTCTGAAATGCAGGGGGTCAATTCCACAGCAACAAGTCAGCAGCTGCAGGAGTCTCGGAGAAGCTCGTTTACAGGTGCTGGGGCCATGGCCAGGCTCTCCCATTTCCTGTTCATGCTGCGGAACTGGGCAACACATAGGCTGCAGCGTGAGGTCGAGCGGCCCGACTCCTTCCTGGAGCGATTCCGTGGGCCTGAGCTCAAAGACATTTCCAGCCGGGGCAGCTATGCCCGCTCCTCCATAGGGCACCCTGACAGACCTCATAAGAGGAACAAAAAAGAGGACAAAGCGAAAGATgagaaaaaagaggaggagaaaaaagatgGAGACAAGAAAGATGAGAAGAAGGATGAAAATAAAGATgagaaaaaagatgaaaagaagGACGATAAAAAGGACGAAAAGAAGGATGATAAGAAGGACGATAAGAAGGATAAAAAGGatgataaaaagaaagaagagccTCCGAAAGAGGTCTGGATCATGGACCCAGCCACAGACAAGTATTACCATTGGCTCACAATAATAGCAGCACCAGTGTTTTACAACCTGATGATGATCGTAACGAGGGCCTGTTTCAATGAGCTACAGAACACCTACACAATCCTGTGGATCATCCTGGACTACACTTCAGATGTAATCTACTACACAGACACATTTGTAAGATCAAGAACAGGGTTCTTGGAGCAAGGCCTGCTGGTTAAGGACGGCACGAAGCTAATGGGGCACTATAGGCAAACCTCGCAGTTCAAATATGACATGTTGTCAATGATTCCCACTGATTTTTTAATGCTGAAGGTGGGATACAACAACCCGGAACTGAGGTTCAATCGTCTGTTTAAAATGGCGCGCCTCTTCGAGTTCTTTGACCGCACAGAGACCAGAACAAACTACCCCAACATCTTCCGTATCAGCAACCTCGTACTTTACATCTTGATCATTATCCACTGGAACGCCTGCATCTTCTTTGCGATTTCCAAAACGATCGGCTTCGGCACAGACACTTGGGTCTACCCCAACATTAGCCATCCTGAATACGGACGCCTAGCTCGAAAATACATCTACTGTTTGTATTGGTCCACTCTTACACTCACCACTATTGGAGAAACCCCTCCTCCTGTCAAAGATGTAGAGTATCTGTTTGTAGTTGCTGACTTCCTCATTGGAGTGCTTATTTTTGCTACTATTGTCGGTAATGTCGGTGCCATGATCTCCAACATGAACGCCTCACGTGCTGAGTTCCAAGCCAAGATTGACTCCATCAAGCAGTACATGCAGTTCCGTAAGGTCTCCAAAGATCTGGAGGCCAGGGTGATCAAGTGGTTCGATTACCTctggacagaaaaaaagaccTGTGACGAGAAGGAGGTGTTGAAGAACCTTCCAGACAAGCTCAAAGCCGAGATTGCCATCAACGTCCATCTGGATACACTGAAGAAGGTGCGGATCTTCCAGGATTGCGAAGCTGGACTGCTGATCGAGTTGGTGCTCAAACTGCAGCCTCAGGTTTTCAGCCCAGGGGATTACATTTGTAAAAAGGGCGACATCGGAAGAGAAATGTACATCATCAAGGAAGGAAAGCTGGCTGTGGTGGCTGATGACGGAGTCACTCAGTTTGTGGTGCTCAGTGATGGAGCATACTTTGGAGAAATCAGTATCCTCGGTATCAAAGGCAGTAAAGCTGGGAACAGGCGGACAGCCAACATCCGAAGTGTGGGCTACTCTGACCTTTTCGCCCTCTCTAAAGATGACCTAATGGAGGCACTTACAGAGTACCCCGAGGCCAAGAAGGCCCTGGAGGAGAAAGGAAAAGCCATCTTGATGAAGGACAACTTGATCGATGAAGCCGTGGCCAACGCAGGGGCAGATCCCAAAGACCTGGAGGAAAAAATTGTGAAACTGGAGAGCAATCTAGATGTCATGACCACCAAGTTTGGTAGACTCATGGCAGAGTACACATCCTACCAAGCCAAGATCAAGCAAAGGCTTACTAACATGGAGAGCAAAGTAAAATCACTTCGGCCAGAAGACCTGTCTGAAGTCGTCGCGGACAAAaaggaagaagagaagaaaaaatagtTCCAAACTGATCAAAATGTGAATAGATACAACATAGACAATGGGGTAAAGGGTTTTTGTTAATATGTACATACGTTCAAACATAGGCAGAACACTACTTTTAAACTGTTTCTACACgttgtttatatgttttgaATATGTGAGTTTGTACAACTTACCAAAAATGTTATGCATCATGAAgcataagtgtttttttaaagagtatGGCCCATTTAAAGTAAGCTCCAGAAAATGTGCATAAAGTATATCCTTATATCACTGTAAACaggtttattattatatgcTGTATCCATTCTTTTTGTACCTATGAACAGACTGAGACAGTATGCTGCATGACCCAGTTTGTCCACTTATTTGTCCTTCAGAGTGTGAGATACTTTGTGGTTCACAAGTTTAAaacatgtctttttttatttgatgggacaatttagaattattttcagatttttttttggcaagCATTAAACACTGTCCCTGTTATTGCAGTGTTTTATCAATACAATAACCAGTTTACCCTGTGTTAtctgaaaaaaagtgttgattgaatatcattgatattttattttagtggaCTTGTTCTTGCTGTTACTTAATCAGTGGCATTGACAGTGTTACTCTTAAAGCATGCTCTGTCAGCCTGGCTAGAACTTCATAATTCCAAAAACTAttcttatttataatattattttttaaaaagatgccATGTCCTTAGAAGCATTACACATGTATAGCTTCTAAATACAAACATCTTaacatataatgtaataaaattttctaaaataa
>XM_022675790.1
TGAGAGAAGTCTGCGTGAGGAGTAGTGGATGCAGTAATACCTGAAGCTGGGAATGCGGTGATGGATTAATATGACCCGGTTTCACACAGGAAAAAGTGGATTATGGCTCAAAAAACGCATCGTGGAATTTGCTTCTCCAGAATGGGATTTTACCGAGTCACATTGAGAGGAACTTGAGGATTAAGAGGCGTTCAGACCTGGAGGAGAAtcagcacagtttaatctgtCCATGAAGTAAATAAGAAACTTTTGTTGTCTCACTGAAGCCTCGCTGTGTTTTAGCAGGAGCTGCATGTCCTGGCAGCAGTGAGCTTTAACAGTGAGAATGGCGAAAATCTGCACCGCAGAGTCGTACCCGTCCCGTCACAGGGTATCAGTTCGAGCCTCAGACGATGAAGTGGACCAAACTGATTACGGTGACAACagGGCACCGTCCATATGTGACGACACTGCCTCTGAAATGCAGGGGGTCAATTCCACAGCAACAAGTCAGCAGCTGCAGGAGTCTCGGAGAAGCTCGTTTACAGGTGCTGGGGCCATGGCCAGAAAAAGCAGTCAGTGGCCTCTAGCAGTGTACAATATGAACAACTGCAACAACACAGACGACAAAAAAGAGGACAAAGCGAAAGATgagaaaaaagaggaggagaaaaaagatgGAGACAAGAAAGATGAGAAGAAGGATGAAAATAAAGATgagaaaaaagatgaaaagaagGACGATAAAAAGGACGAAAAGAAGGATGATAAGAAGGACGATAAGAAGGATAAAAAGGatgataaaaagaaagaagagccTCCGAAAGAGGTCTGGATCATGGACCCAGCCACAGACAAGTATTACCATTGGCTCACAATAATAGCAGCACCAGTGTTTTACAACCTGATGATGATCGTAACGAGGGCCTGTTTCAATGAGCTACAGAACACCTACACAATCCTGTGGATCATCCTGGACTACACTTCAGATGTAATCTACTACACAGACACATTTGTAAGATCAAGAACAGGGTTCTTGGAGCAAGGCCTGCTGGTTAAGGACGGCACGAAGCTAATGGGGCACTATAGGCAAACCTCGCAGTTCAAATATGACATGTTGTCAATGATTCCCACTGATTTTTTAATGCTGAAGGTGGGATACAACAACCCGGAACTGAGGTTCAATCGTCTGTTTAAAATGGCGCGCCTCTTCGAGTTCTTTGACCGCACAGAGACCAGAACAAACTACCCCAACATCTTCCGTATCAGCAACCTCGTACTTTACATCTTGATCATTATCCACTGGAACGCCTGCATCTTCTTTGCGATTTCCAAAACGATCGGCTTCGGCACAGACACTTGGGTCTACCCCAACATTAGCCATCCTGAATACGGACGCCTAGCTCGAAAATACATCTACTGTTTGTATTGGTCCACTCTTACACTCACCACTATTGGAGAAACCCCTCCTCCTGTCAAAGATGTAGAGTATCTGTTTGTAGTTGCTGACTTCCTCATTGGAGTGCTTATTTTTGCTACTATTGTCGGTAATGTCGGTGCCATGATCTCCAACATGAACGCCTCACGTGCTGAGTTCCAAGCCAAGATTGACTCCATCAAGCAGTACATGCAGTTCCGTAAGGTCTCCAAAGATCTGGAGGCCAGGGTGATCAAGTGGTTCGATTACCTctggacagaaaaaaagaccTGTGACGAGAAGGAGGTGTTGAAGAACCTTCCAGACAAGCTCAAAGCCGAGATTGCCATCAACGTCCATCTGGATACACTGAAGAAGGTGCGGATCTTCCAGGATTGCGAAGCTGGACTGCTGATCGAGTTGGTGCTCAAACTGCAGCCTCAGGTTTTCAGCCCAGGGGATTACATTTGTAAAAAGGGCGACATCGGAAGAGAAATGTACATCATCAAGGAAGGAAAGCTGGCTGTGGTGGCTGATGACGGAGTCACTCAGTTTGTGGTGCTCAGTGATGGAGCATACTTTGGAGAAATCAGTATCCTCGGTATCAAAGGCAGTAAAGCTGGGAACAGGCGGACAGCCAACATCCGAAGTGTGGGCTACTCTGACCTTTTCGCCCTCTCTAAAGATGACCTAATGGAGGCACTTACAGAGTACCCCGAGGCCAAGAAGGCCCTGGAGGAGAAAGGAAAAGCCATCTTGATGAAGGACAACTTGATCGATGAAGCCGTGGCCAACGCAGGGGCAGATCCCAAAGACCTGGAGGAAAAAATTGTGAAACTGGAGAGCAATCTAGATGTCATGACCACCAAGTTTGGTAGACTCATGGCAGAGTACACATCCTACCAAGCCAAGATCAAGCAAAGGCTTACTAACATGGAGAGCAAAGTAAAATCACTTCGGCCAGAAGACCTGTCTGAAGTCGTCGCGGACAAAaaggaagaagagaagaaaaaatagtTCCAAACTGATCAAAATGTGAATAGATACAACATAGACAATGGGGTAAAGGGTTTTTGTTAATATGTACATACGTTCAAACATAGGCAGAACACTACTTTTAAACTGTTTCTACACgttgtttatatgttttgaATATGTGAGTTTGTACAACTTACCAAAAATGTTATGCATCATGAAgcataagtgtttttttaaagagtatGGCCCATTTAAAGTAAGCTCCAGAAAATGTGCATAAAGTATATCCTTATATCACTGTAAACaggtttattattatatgcTGTATCCATTCTTTTTGTACCTATGAACAGACTGAGACAGTATGCTGCATGACCCAGTTTGTCCACTTATTTGTCCTTCAGAGTGTGAGATACTTTGTGGTTCACAAGTTTAAaacatgtctttttttatttgatgggacaatttagaattattttcagatttttttttggcaagCATTAAACACTGTCCCTGTTATTGCAGTGTTTTATCAATACAATAACCAGTTTACCCTGTGTTAtctgaaaaaaagtgttgattgaatatcattgatattttattttagtggaCTTGTTCTTGCTGTTACTTAATCAGTGGCATTGACAGTGTTACTCTTAAAGCATGCTCTGTCAGCCTGGCTAGAACTTCATAATTCCAAAAACTAttcttatttataatattattttttaaaaagatgccATGTCCTTAGAAGCATTACACATGTATAGCTTCTAAATACAAACATCTTaacatataatgtaataaaattttctaaaataa
>XM_022675791.1
TGAGAGAAGTCTGCGTGAGGAGTAGTGGATGCAGTAATACCTGAAGCTGGGAATGCGGTGATGGATTAATATGACCCGGTTTCACACAGGAAAAAGTGGATTATGGCTCAAAAAACGCATCGTGGAATTTGCTTCTCCAGAATGGGATTTTACCGAGTCACATTGAGAGGAACTTGAGGATTAAGAGGCGTTCAGACCTGGAGGAGAAtcagcacagtttaatctgtCCATGAAGTAAATAAGAAACTTTTGTTGTCTCACTGAAGCCTCGCTGTGTTTTAGCAGGAGCTGCATGTCCTGGCAGCAGTGAGCTTTAACAGTGAGAATGGCGAAAATCTGCACCGCAGAGTCGTACCCGTCCCGTCACAGGGTATCAGTTCGAGCCTCAGACGATGAAGTGGACCAAACTGATTACGGTGACAACagGGCACCGTCCATATGTGACGACACTGCCTCTGAAATGCAGGGGGTCAATTCCACAGCAACAAGTCAGCAGCTGCAGGAGTCTCGGAGAAGCTCGTTTACAGGTGCTGGGGCCATGGCCAGGCTCTCCCATTTCCTGTTCATGCTGCGGAACTGGGCAACACATAGGCTGCAGCGTGAGGTCGAGCGGCCCGACTCCTTCCTGGAGCGATTCCGTGGGCCTGAGCTCAAAGACATTTCCAGCCGGGGCAGCTATGCCCGCTCCTCCATAGGGCACCCTGACAGACCTCATAAGAGGAAGAAAGAGGTCTGGATCATGGACCCAGCCACAGACAAGTATTACCATTGGCTCACAATAATAGCAGCACCAGTGTTTTACAACCTGATGATGATCGTAACGAGGGCCTGTTTCAATGAGCTACAGAACACCTACACAATCCTGTGGATCATCCTGGACTACACTTCAGATGTAATCTACTACACAGACACATTTGTAAGATCAAGAACAGGGTTCTTGGAGCAAGGCCTGCTGGTTAAGGACGGCACGAAGCTAATGGGGCACTATAGGCAAACCTCGCAGTTCAAATATGACATGTTGTCAATGATTCCCACTGATTTTTTAATGCTGAAGGTGGGATACAACAACCCGGAACTGAGGTTCAATCGTCTGTTTAAAATGGCGCGCCTCTTCGAGTTCTTTGACCGCACAGAGACCAGAACAAACTACCCCAACATCTTCCGTATCAGCAACCTCGTACTTTACATCTTGATCATTATCCACTGGAACGCCTGCATCTTCTTTGCGATTTCCAAAACGATCGGCTTCGGCACAGACACTTGGGTCTACCCCAACATTAGCCATCCTGAATACGGACGCCTAGCTCGAAAATACATCTACTGTTTGTATTGGTCCACTCTTACACTCACCACTATTGGAGAAACCCCTCCTCCTGTCAAAGATGTAGAGTATCTGTTTGTAGTTGCTGACTTCCTCATTGGAGTGCTTATTTTTGCTACTATTGTCGGTAATGTCGGTGCCATGATCTCCAACATGAACGCCTCACGTGCTGAGTTCCAAGCCAAGATTGACTCCATCAAGCAGTACATGCAGTTCCGTAAGGTCTCCAAAGATCTGGAGGCCAGGGTGATCAAGTGGTTCGATTACCTctggacagaaaaaaagaccTGTGACGAGAAGGAGGTGTTGAAGAACCTTCCAGACAAGCTCAAAGCCGAGATTGCCATCAACGTCCATCTGGATACACTGAAGAAGGTGCGGATCTTCCAGGATTGCGAAGCTGGACTGCTGATCGAGTTGGTGCTCAAACTGCAGCCTCAGGTTTTCAGCCCAGGGGATTACATTTGTAAAAAGGGCGACATCGGAAGAGAAATGTACATCATCAAGGAAGGAAAGCTGGCTGTGGTGGCTGATGACGGAGTCACTCAGTTTGTGGTGCTCAGTGATGGAGCATACTTTGGAGAAATCAGTATCCTCGGTATCAAAGGCAGTAAAGCTGGGAACAGGCGGACAGCCAACATCCGAAGTGTGGGCTACTCTGACCTTTTCGCCCTCTCTAAAGATGACCTAATGGAGGCACTTACAGAGTACCCCGAGGCCAAGAAGGCCCTGGAGGAGAAAGGAAAAGCCATCTTGATGAAGGACAACTTGATCGATGAAGCCGTGGCCAACGCAGGGGCAGATCCCAAAGACCTGGAGGAAAAAATTGTGAAACTGGAGAGCAATCTAGATGTCATGACCACCAAGTTTGGTAGACTCATGGCAGAGTACACATCCTACCAAGCCAAGATCAAGCAAAGGCTTACTAACATGGAGAGCAAAGTAAAATCACTTCGGCCAGAAGACCTGTCTGAAGTCGTCGCGGACAAAaaggaagaagagaagaaaaaatagtTCCAAACTGATCAAAATGTGAATAGATACAACATAGACAATGGGGTAAAGGGTTTTTGTTAATATGTACATACGTTCAAACATAGGCAGAACACTACTTTTAAACTGTTTCTACACgttgtttatatgttttgaATATGTGAGTTTGTACAACTTACCAAAAATGTTATGCATCATGAAgcataagtgtttttttaaagagtatGGCCCATTTAAAGTAAGCTCCAGAAAATGTGCATAAAGTATATCCTTATATCACTGTAAACaggtttattattatatgcTGTATCCATTCTTTTTGTACCTATGAACAGACTGAGACAGTATGCTGCATGACCCAGTTTGTCCACTTATTTGTCCTTCAGAGTGTGAGATACTTTGTGGTTCACAAGTTTAAaacatgtctttttttatttgatgggacaatttagaattattttcagatttttttttggcaagCATTAAACACTGTCCCTGTTATTGCAGTGTTTTATCAATACAATAACCAGTTTACCCTGTGTTAtctgaaaaaaagtgttgattgaatatcattgatattttattttagtggaCTTGTTCTTGCTGTTACTTAATCAGTGGCATTGACAGTGTTACTCTTAAAGCATGCTCTGTCAGCCTGGCTAGAACTTCATAATTCCAAAAACTAttcttatttataatattattttttaaaaagatgccATGTCCTTAGAAGCATTACACATGTATAGCTTCTAAATACAAACATCTTaacatataatgtaataaaattttctaaaataa
>XM_022675792.1
TGAGAGAAGTCTGCGTGAGGAGTAGTGGATGCAGTAATACCTGAAGCTGGGAATGCGGTGATGGATTAATATGACCCGGTTTCACACAGGAAAAAGTGGATTATGGCTCAAAAAACGCATCGTGGAATTTGCTTCTCCAGAATGGGATTTTACCGAGTCACATTGAGAGGAACTTGAGGATTAAGAGGCGTTCAGACCTGGAGGAGAAtcagcacagtttaatctgtCCATGAAGTAAATAAGAAACTTTTGTTGTCTCACTGAAGCCTCGCTGTGTTTTAGCAGGAGCTGCATGTCCTGGCAGCAGTGAGCTTTAACAGTGAGAATGGCGAAAATCTGCACCGCAGAGTCGTACCCGTCCCGTCACAGGGTATCAGTTCGAGCCTCAGACGATGAAGTGGACCAAACTGATTACGGTGACAACagGGCACCGTCCATATGTGACGACACTGCCTCTGAAATGCAGGGGGTCAATTCCACAGCAACAAGTCAGCAGCTGCAGGAGTCTCGGAGAAGCTCGTTTACAGGTGCTGGGGCCATGGCCAGGCTCTCCCATTTCCTGTTCATGCTGCGGAACTGGGCAACACATAGGCTGCAGCGTGAGGTCGAGCGGCCCGACTCCTTCCTGGAGCGATTCCGTGGGCCTGAGCTCAAAGACATTTCCAGCCGGGGCAGCTATGCCCGCTCCTCCATAGGGCACCCTGACAGACCTCATAAGAGGAAAAAAAGCAGTCAGTGGCCTCTAGCAGTGTACAATATGAACAACTGCAACAACACAGACGACAAAAAAGAGGACAAAGCGAAAGATgagaaaaaagaggaggagaaaaaagatgGAGACAAGAAAGATGAGAAGAAGGATGAAAATAAAGATgagaaaaaagatgaaaagaagGACGATAAAAAGGACGAAAAGAAGGATGATAAGAAGGACGATAAGAAGGATAAAAAGGatgataaaaagaaagaagagccTCCGAAAGAGGTCTGGATCATGGACCCAGCCACAGACAAGTATTACCATTGGCTCACAATAATAGCAGCACCAGTGTTTTACAACCTGATGATGATCGTAACGAGGGCCTGTTTCAATGAGCTACAGAACACCTACACAATCCTGTGGATCATCCTGGACTACACTTCAGATGTAATCTACTACACAGACACATTTGTAAGATCAAGAACAGGGTTCTTGGAGCAAGGCCTGCTGGTTAAGGACGGCACGAAGCTAATGGGGCACTATAGGCAAACCTCGCAGTTCAAATATGACATGTTGTCAATGATTCCCACTGATTTTTTAATGCTGAAGGTGGGATACAACAACCCGGAACTGAGGTTCAATCGTCTGTTTAAAATGGCGCGCCTCTTCGAGTTCTTTGACCGCACAGAGACCAGAACAAACTACCCCAACATCTTCCGTATCAGCAACCTCGTACTTTACATCTTGATCATTATCCACTGGAACGCCTGCATCTTCTTTGCGATTTCCAAAACGATCGGCTTCGGCACAGACACTTGGGTCTACCCCAACATTAGCCATCCTGAATACGGACGCCTAGCTCGAAAATACATCTACTGTTTGTATTGGTCCACTCTTACACTCACCACTATTGGAGAAACCCCTCCTCCTGTCAAAGATGTAGAGTATCTGTTTGTAGTTGCTGACTTCCTCATTGGAGTGCTTATTTTTGCTACTATTGTCGGTAATGTCGGTGCCATGATCTCCAACATGAACGCCTCACGTGCTGAGTTCCAAGCCAAGATTGACTCCATCAAGCAGTACATGCAGTTCCGTAAGGTCTCCAAAGATCTGGAGGCCAGGGTGATCAAGTGGTTCGATTACCTctggacagaaaaaaagaccTGTGACGAGAAGGAGGTGTTGAAGAACCTTCCAGACAAGCTCAAAGCCGAGATTGCCATCAACGTCCATCTGGATACACTGAAGAAGGTGCGGATCTTCCAGGATTGCGAAGCTGGACTGCTGATCGAGTTGGTGCTCAAACTGCAGCCTCAGGTTTTCAGCCCAGGGGATTACATTTGTAAAAAGGGCGACATCGGAAGAGAAATGTACATCATCAAGGAAGGAAAGCTGGCTGTGGTGGCTGATGACGGAGTCACTCAGTTTGTGGTGCTCAGTGATGGAGCATACTTTGGAGAAATCAGTATCCTCGGTATCAAAGGCAGTAAAGCTGGGAACAGGCGGACAGCCAACATCCGAAGTGTGGGCTACTCTGACCTTTTCGCCCTCTCTAAAGATGACCTAATGGAGGCACTTACAGAGTACCCCGAGGCCAAGAAGGCCCTGGAGGAGAAAGGAAAAGCCATCTTGATGAAGGACAACTTGATCGATGAAGCCGTGGCCAACGCAGGGGCAGATCCCAAAGACCTGGAGGAAAAAATTGTGAAACTGGAGAGCAATCTAGATGTCATGACCACCAAGTTTGGTAGACTCATGGCAGAGTACACATCCTACCAAGCCAAGATCAAGCAAAGGCTTACTAACATGGAGAGCAAAGTAAAATCACTTCGGCCAGAAGACCTGTCTGAAGTCGTCGCGGACAAAaaggaagaagagaagaaaaaatagtTCCAAACTGATCAAAATGTGAATAGATACAACATAGACAATGGGGTAAAGGGTTTTTGTTAATATGTACATACGTTCAAACATAGGCAGAACACTACTTTTAAACTGTTTCTACACgttgtttatatgttttgaATATGTGAGTTTGTACAACTTACCAAAAATGTTATGCATCATGAAgcataagtgtttttttaaagagtatGGCCCATTTAAAGTAAGCTCCAGAAAATGTGCATAAAGTATATCCTTATATCACTGTAAACaggtttattattatatgcTGTATCCATTCTTTTTGTACCTATGAACAGACTGAGACAGTATGCTGCATGACCCAGTTTGTCCACTTATTTGTCCTTCAGAGTGTGAGATACTTTGTGGTTCACAAGTTTAAaacatgtctttttttatttgatgggacaatttagaattattttcagatttttttttggcaagCATTAAACACTGTCCCTGTTATTGCAGTGTTTTATCAATACAATAACCAGTTTACCCTGTGTTAtctgaaaaaaagtgttgattgaatatcattgatattttattttagtggaCTTGTTCTTGCTGTTACTTAATCAGTGGCATTGACAGTGTTACTCTTAAAGCATGCTCTGTCAGCCTGGCTAGAACTTCATAATTCCAAAAACTAttcttatttataatattattttttaaaaagatgccATGTCCTTAGAAGCATTACACATGTATAGCTTCTAAATACAAACATCTTaacatataatgtaataaaattttctaaaataa

Function

symbol description
cnga3a Predicted to enable cGMP binding activity; intracellular cAMP-activated cation channel activity; and intracellular cGMP-activated cation channel activity. Predicted to act upstream of or within ion transport and transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in gonad; heart; and nervous system. Human ortholog(s) of this gene implicated in achromatopsia 2 and color blindness. Orthologous to human CNGA3 (cyclic nucleotide gated channel subunit alpha 3).

NR:

description
PREDICTED: cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0042391 regulation of membrane potential biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0070588 calcium ion transmembrane transport biological_process
GO:0007603 phototransduction, visible light biological_process
GO:0006874 cellular calcium ion homeostasis biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005219 ryanodine-sensitive calcium-release channel activity molecular_function
GO:0005222 intracellular cAMP-activated cation channel activity molecular_function
GO:0005223 intracellular cGMP-activated cation channel activity molecular_function
GO:0030553 cGMP binding molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04950 CNGA3; cyclic nucleotide gated channel alpha 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675789.1 False 3313 mRNA 0.43 8 37221320 37233209
XM_022675790.1 False 3196 mRNA 0.43 8 37221320 37233209
XM_022675791.1 False 3118 mRNA 0.44 7 37221320 37233209
XM_022675792.1 True 3373 mRNA 0.43 9 37221320 37233209

Neighbor

gene id symbol gene type direction distance location
LOC103044613 NA coding upstream 62000 37131574 ~ 37159320 (+)
LOC103046872 NA coding upstream 132828 37057441 ~ 37088492 (+)
LOC103046153 eif4b,LOC108441049 coding upstream 170912 37041366 ~ 37050408 (+)
LOC103021407 LOC108441035,LOC108272207 coding upstream 211130 36993982 ~ 37010190 (+)
apof NA coding upstream 231271 36985932 ~ 36990049 (+)
gabrg3 gabrg3 coding downstream 386827 37620036 ~ 37829531 (+)
nipa1 nipa1 coding downstream 914733 38147942 ~ 38154159 (+)
nipa2 nipa2,LOC107673599,LOC107582725,LOC107716965 coding downstream 921890 38155099 ~ 38164964 (+)
fndc9 fndc9 coding downstream 951116 38184325 ~ 38189931 (+)
chst7 chst7,LOC107582727 coding downstream 1014765 38247974 ~ 38262903 (+)
G116532 LOC108441132,LOC107711082,LOC107585147,LOC107673595,LOC107685285,LOC107733606,LOC107582800 non-coding upstream 22226 37191070 ~ 37199094 (+)
G116507 NA non-coding upstream 96885 37121690 ~ 37124435 (+)
G116511 NA non-coding upstream 122787 37098254 ~ 37098533 (+)
G116466 NA non-coding upstream 207135 37011453 ~ 37014185 (+)
G116378 NA non-coding upstream 311671 36909203 ~ 36909649 (+)
G116539 NA non-coding downstream 18998 37252207 ~ 37252770 (+)
G116536 NA non-coding downstream 32067 37265276 ~ 37273002 (+)
G116553 NA non-coding downstream 203039 37436248 ~ 37436492 (+)
G116574 NA non-coding downstream 438627 37671836 ~ 37673086 (+)
G116580 NA non-coding downstream 567008 37800217 ~ 37800754 (+)
LOC103045245 vdrb,LOC108272216,LOC107585146,LOC107673565,LOC107711077,LOC108441087 other upstream 99993 37100014 ~ 37121327 (+)
LOC103044253 LOC108440873 other upstream 507436 36657392 ~ 36713884 (+)
LOC103024058 LOC103024058,LOC108440764,LOC107748389,LOC107711047,LOC107673509,LOC107585116,LOC106583201 other upstream 861543 36342985 ~ 36359777 (+)
G116103 prkcda,LOC103030273,LOC108440644,LOC107582675,LOC107667398,LOC107721176,LOC107673500,LOC107712078,LOC108271968 other upstream 1233260 35982119 ~ 35988060 (+)
tomm6 NA other upstream 1253442 35958543 ~ 35967878 (+)
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289 other downstream 291642 37524851 ~ 37612322 (+)
LOC103036266 LOC108441345 other downstream 1157068 38390277 ~ 38394530 (+)
G116997 NA other downstream 2125662 39358871 ~ 39359388 (+)
LOC103033994 LOC103033994,LOC108441647 other downstream 3566262 40799471 ~ 40808545 (+)
fam183a NA other downstream 3925978 41159187 ~ 41166159 (+)

Expression


Co-expression Network