c13h1orf226 (nos1ap)


Basic Information

Item Value
gene id c13h1orf226
gene name nos1ap
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 40580376 ~ 40600295 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675827.1
GTTGCATAAAACTATTACAGCTTTACAGCAGCtcttgtgtgttgtgtatgtttATGTAGTTATTAAGACGTGTCCTCTATGTTTCATTCTAATGCTTTCCGAGAAATAATGTTCTGAGTTGACCAAAGCATGTTTGAGAATTCCAATGCAGCcgagcagcagaagcagagtCTGAGGATGGCCGGAGTCGTTTCCTCCAGCCCTGCTGGACAAAAGAGTggaggcagcagcagccagcACCTGAAAAACTTGGGCAAGGCCGTCGGAGCTAAGGTCAATGACCTGCTGCGCCGCAAAGACCCCAGCAGCCTGGGGGACATCGGGGTCACAGAGGTTAACAAGAACGTGGAGGCAGTGTGGGCCAGCCTGACCGAGATGGGCCTTGGCACAACCGCTAACAGTCACATGTCTTTGGACTCCTTCCCGCGCCTGGATCCTCCACCTCCCACCAGCAAGAAGCGGCTTCCTCGAGCTTTAAAGACCACTCAGGACATGATGATCTCATCTGACCCAGTGGTAGCCTCCCCAGAGGTCTCCGACTCCTCCCTCCTGtcctccccagataagagctgcCTCATATCATCAAGCAAGGCCCAGGATCAATTCCAGCCCTGCCTCGAAGAGCCAGGCCTGGAGCCAGAGACACCTTCAGCAGCCAGCACGCCTCTGGAGATCCAGATAAAGGAGGAGAGTGGATCAGCAGAGGTGAAAGGGCAGTGTGGCAGTACAGATGCTGTGCAGATGGCAGACGGGCTGAAGGAGCTTGACGCTGCGAAAGAAGACCAGTCTCAGGTGCTGCGCTCCGTTCCTGACCTCATTCACAAGGATAACCTGGAGCTGAAACAAAAACTGAACAGTATGGAGTCTAGAATGGCCTCCACACCTTGCCCGGGGAAAGGAGGCTGTCGCATCAGCCTGAGCGAGGGGGAGCTCCTGGAAAACGGTTCAGTGGACTATAAAAGCTCCAGGAGAAGCTCCAACATGGAGAACGAGGAACCACACCCAGACCTGCTTTCATTTGAGTAGTAGTAAGTCTTATCATGCTGAGGACAGCACCAGCATCATCAGTGGAAAGTCATTCTCAAGCAACCCCCAACTGAGGTTATTCTGATGTGCTGGTGCTGATGGTGCACAATTCTACAGGTTTCCATAGGTGTTCTATGAGGGAACCAAGCAACATGCTACATGGCTTTGTCTTTCTGATCTTTCTATGAACCAGTCTATATTTCCTGTGTATGCACTATAACATCTTTATTATGCTCAGTTTTATAGCTTATCTCTACTAcagatgtatttttaaattatattttacagaTCTAATTtcttagaaaacaaaaaatcactACTTTAGATTTGTTCAATCACGTATTATTACCGTCAGTTGTGTATTTTAGCTTTAAATCGTAttagttttacatgttttatgcTAAAGAATTGAAACTGCCAGCTCGTCAATAGAAACCAAAGCCAAAACAAAGCACATTTCCTATGTTGTAATACCTCTGAATCTGTTCACgtacatcacatcacatcacatacCCTCTGCAGGCAGCTTTCCTGTATTGGATACGTTGTTTCACACCAAAGTTTGCTTCCGTCAAAACTACAAGCTCAGCTTCTCCCAGAAATTCCCATCACCAGCTATAGGAGTAAGCCTCCAACCCCGGGCTAAGCCTGGTAAAGCATAAAATAGCTGATGGTGGcgctttgttttgtgttttgactGTTTAATTTGACGGAGGCCTATGCATTCGCAGTCAGGCAGAACATGCGGGAGGAATTAGAAGGACACATGAGGAATGTAGGGGCTGAATTCCTGAAGGGTAGAGAAGGCTTTGTTAAGGTCTTTACGCTTTTGAAAGAGTCAAACAACCTGAACAATATACTGACATGGAGTCTGTATAATGTACTGGGTATTAGGGTGTTTTCACGCCAATAGTCAGTTTGCaatggtctgaatcagttaatgagcTTGTAAACTtggtgcgtttttttttttctttttgtttttcacaccaaggaaaagaaaaaaaatccagcacacTTGAGGCTGTGTGTCACAACAGACTAAACCCTTATCCACACATACACTTCAGAAAATATCTGGAGAATCAGGTCTTGACTTTGTACGAgtacaacaacaaacaacaaaatgtttaaatccaCAATATTAGGGGTAGAATGGAAAGGATtaagcattgccgagtagctagccagcacactcggagaaaagcgcagtgactcagttccgatacatcagctcacagacgtcttatgctgatcaacatcaccctaggagtgatgaagggaaagagtgccatctagcCCCCCAGAGAGAGCCATGCTCTctcagttgtgctctctcagggctccggcagctgatgacaagctgcatgaccaggattcaaaccagcgatctcccgatcacaaTTGGCAGCTCTTTAgagcgctggaccactcggtgccctgAGATGATGTTTTGAAGAACTTTGACTCATACCCACAATAAATTTTCTGGAACATTCCCTGCTCTATTCACACATGCATGAGCTCACTCAGACATGATCCTCAAATTTTGTTAGGGAACTACCAGAAAGAGATCTGGACGATGTCCAAAGCAGTTAACACCAACATTTGCGTTCACACATGCCACCGCTCTAGATAAATCTAGAAAAGTTCTGGATTTCAGTTGCTGTATTGAAAGGGGGCTTAGGATGCTGGCTCAAGAATCACGAGTTCAAATCACAAGTTCATCACTTCTGTTATGGTTTAGCTAGAACAGGCTTCTGTTGGCatatgtatcagagctgggaatgGTGCTGGCATTGGCCTTATGGTAGATGGCTGCCTAGTGTTGCTGCATTGGcgacagtttaaaaaaaaaaagtgagtgtctggcttcacatgtatctgaggaGACATTTGCTAGCcctcaccctcctagtgtttgAAGCATTACTTGTGATAGTCCTAATGCGTAAATGGGTGGATCATTTGATTCAACTAAAcgtgtttgaaaaaaaatatatagaaaaatacaACAAACGTGAGAATGTTCTCTCCTCCTATTGGTCAGATCTGTCTGGGGCAGGAGCAAGAAATACAGGAAAAATGTCCTGTGCTCTGGACTAGGGCCTATTTCTGTTCAGTTTAACACAGCAATAATAGAGATGGGTCAAACTGAGGCCAGATCACATTCTCCTCAACTCAAACACACTTCTCCAGAGTTAGTTTGAAACCAGACTGAGATCACTTCCTGTCAAGGGTCTCAGTGTGGTTGTGTTGGTCCACATCCAAATACaattactgtattcacacctgaccaaacaaattacacatccaagtgcatttactgtattcacacctgTCCAAACTAATTCTGAGTTCACATAAACCAGAATAAaatgtgctggtgtgaaaacgcccttagtaATTAAATTACTCAGTATGAATATTCAGTGTATTGTGACTCTAATGAAAATTAATAACTGGAAAGAAGAATCTCTGTTTCAGTCATTTTTGAGGCACACTAGGTAAGGCAGCACTGGAATAGAAGGCTCAGAGCAGGTTTTTTGGCACCGTTAGAACTGGTTTTGCATGACCGAGTTTATAGGATCTTACAGTGGCTGTGGGTTTGTCATGGCAATAATCGTTAAAGTGATGGCAGGCTTGTGAAATGGCACTAATGAGGCGTCCGTCAGCGGAAAGGTATGAGAACAGGCTCGGAGTAGCCGAGGAATGTCGGAACTCTGCACGAATCTCAGCTGACCTCTTGTCTTCAGAGGCAGCTACTGATTCCCCAAACCCTCAAGAGATGCTTTCAGTGTTGAACTAATTTTTGTCTTTCAGACGCACTTCAAGatcatatatacataaaaagtgGTGCACAAAAAAGTGCAGGCATCCTTAGGTAAAATCTCTGTTACTGTGAATTAGGGGTGAGCGATATGACcctaataatataacaatattttaggttatttttgtgataacgatattgTTGACAATATGgcaaaatgttgaaaaatatatatatttttacttactAATTTCAAAAACTTAGTACTGCAACATATGTAGTACCAGTAGATTagtttcaaacattcagtagaaacaaaacaatTGTTAAGGTTTGCGCATCAAAACagtatatttagtgcatgcatatgaaTGTCAAAATATACCCATAAAACATCACAGTAaattgcaaaacaaatacaaaatagactgcGTTCAAGGAATATTATCTCAACAAAATGTGTAGTTTCACAAATTATATAGATATTATATAGAAATTATGTAGACATTGTGAACAATATGAACaactaaagtaaataaaacgTAACTTGATTTCCAAAAAAGTCCCAAAAGtcacagatttcattttttaccatttcaaaagaaaaaaagcccaAAGATAAAGACTAAGCACTCTGCATGCTCAGCACTAAATAAATCACCTGGTCATCTTTTTTCGATCATGTTTAGGTTGCAGTACTAAGGATCATGGTAAAATCTTTAACAAACAGAGGAGTGTTTGCTTTTTAGAGATTTTGCTGCTAGTTAAATTAATTTCCCCTGCTACTGGCTGCAGTATAAATCAAAAGTCATAATGcacccacccccatgcttaacagttggaagGGCGTTCTTTGCATGAATCGTCTACTCACTCACTTTTTCACAGTAACAAATATTCTATGTTGACCAAGGATTCCCAAACAtctgcaagccactgtacagtACACTGTGCCTATAGCCACAAATAGCATTCATTTCACAGTTTTATAAGAAATATGCAATATTCAGTTATCTTTTATCAGGTGTTTTACAGGAAGAGGGTTGTGCAATTGCAGCAGGTCAGAAGAGGGTTAACAGAATGTCAGTTAAGTGCAGGTCAGGGTAATGAGTGTAAGTGAGAAATGCTCAAGGTAAAGTAACAAAGGGATGTGTTGTTCATTTTAAGCACATTATTATAACAATGGAAATGTTCTATAAATGTCACTTAAACTTAAGGGCAAATATCTTATCATGTATGTCCTGCATTTCATGTGTTTATCACTGTCATATTGTTATGTCATTGTTAATGAGAGCTAATGTGTTGTAACAGGATGGGATGGGATGAGTTGTCAGATGTTCTCTGCAGATTTGAACACTAGAAATAGAGAAAATGATGAACACTATTAGATAAATGCTGTACTAATGCTGGCCACTCACTGTTGTATTGTAATGTTATATTGGGTTATAAAATGtgaagttatttttattattatgatctATTTTATGATACCTTTTAAGACTGCTATGTATATGTGGtggggacaaaaaaaatcaatgaaaaaaaaattgagatttctattttagtttattgtaGTTTTGAAGATGATTTTTATACAGAGCTGTGGTAAAATAATGGGAATTTATCACAAAAAGAAtgattgtattttcttttattacagtGATTTTCATAGTTTGTTAACTGCTTAATTATCTGTGGTCTGGTCACTTTCACAATGTTCTGAAATGAAGGAATTACAGAATTGCTGAAGGAAAGACTCCTGTTTATGAAGGGTTTATTATAAGCGCACTAAAATGTAGTTAGAGGAACCTCAAATGTTCAggcttttttattaaagattcttttttaaagaaa

Function

symbol description
nos1ap Predicted to enable nitric-oxide synthase binding activity. Involved in postsynaptic actin cytoskeleton organization; regulation of heart rate by chemical signal; and regulation of ventricular cardiac muscle cell membrane repolarization. Is active in glutamatergic synapse. Implicated in nephrotic syndrome type 22.

NR:

description
PREDICTED: carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675827.1 True 5653 mRNA 0.41 3 40580376 40600295

Neighbor

gene id symbol gene type direction distance location
nos1ap nos1ap,LOC107711121,LOC107551033 coding upstream 13238 40417327 ~ 40567138 (+)
LOC103040381 rgs5a,LOC108441543,LOC107732440,LOC107564083,LOC107685321,LOC107684230 coding upstream 240702 40318758 ~ 40339674 (+)
LOC103040699 LOC103040699,LOC108440142,LOC108271632 coding upstream 303887 40273386 ~ 40276489 (+)
LOC103027818 rgs8,LOC108441527,LOC108271678,LOC107711118,LOC107551030,LOC107732448,LOC107564081 coding upstream 321157 40224051 ~ 40259219 (+)
LOC103028032 brinp3a.1,LOC108441513,LOC107585174,LOC107711117,LOC107732447,LOC107685317 coding upstream 570840 39954473 ~ 40009536 (+)
uap1 uap1,LOC107551035,LOC107724142 coding downstream 37490 40637785 ~ 40653811 (+)
ddr2 ddr2,ddr2a,LOC107551036,LOC107692417,LOC107724144 coding downstream 58105 40658400 ~ 40709827 (+)
hsd17b7 hsd17b7,LOC107551038,LOC107724130 coding downstream 110611 40710906 ~ 40718070 (+)
LOC103035173 serbp1,LOC107594603,LOC107758366,LOC107692416 coding downstream 125362 40725657 ~ 40732566 (+)
LOC103042225 NA coding downstream 177350 40777645 ~ 40783201 (+)
G117152 NA non-coding upstream 72 40567208 ~ 40580304 (+)
G117147 NA non-coding upstream 217799 40360340 ~ 40362577 (+)
G117111 NA non-coding upstream 443649 40129092 ~ 40136727 (+)
G117108 NA non-coding upstream 488532 40091595 ~ 40091844 (+)
G117102 NA non-coding upstream 542845 40037300 ~ 40037531 (+)
G117154 NA non-coding downstream 19273 40619568 ~ 40620766 (+)
G117156 NA non-coding downstream 23715 40624010 ~ 40630144 (+)
G117183 NA non-coding downstream 216881 40817176 ~ 40821330 (+)
G117299 NA non-coding downstream 491206 41091501 ~ 41091992 (+)
G117324 ap1m3,LOC108441657,LOC108271949,LOC103463064,LOC106528254,LOC107724146,LOC103137203 non-coding downstream 625880 41226175 ~ 41233853 (+)
G116997 NA other upstream 1220988 39358871 ~ 39359388 (+)
LOC103036266 LOC108441345 other upstream 2185846 38390277 ~ 38394530 (+)
gabra5 gabra5,LOC107711088,LOC107673539,LOC107585151,LOC107685289 other upstream 2968054 37524851 ~ 37612322 (+)
LOC103045245 vdrb,LOC108272216,LOC107585146,LOC107673565,LOC107711077,LOC108441087 other upstream 3459049 37100014 ~ 37121327 (+)
LOC103044253 LOC108440873 other upstream 3866492 36657392 ~ 36713884 (+)
LOC103033994 LOC103033994,LOC108441647 other downstream 199176 40799471 ~ 40808545 (+)
fam183a NA other downstream 558892 41159187 ~ 41166159 (+)
pomgnt1 pomgnt1,LOC102776429 other downstream 753206 41353501 ~ 41367729 (+)
G117642 NA other downstream 1751512 42351807 ~ 42355784 (+)

Expression


Co-expression Network