LOC103033504


Basic Information

Item Value
gene id LOC103033504
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 42361736 ~ 42381697 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675856.1
TACAGTGTTGTTAAATGACAGACAGCAAGTTCAGCTACATCACAAAGAGGCGTGTAGTTAATTTAGAATATATGTTAATCTGTCTAATGACAATCGATGTTCCTGGAGTTTACACTCTCGTATAGCTAGTTAAACTAGCGGTACTGACGGGTTTTAAAGGTTTGTAATGCGGTTCAGTCACACTACGACAGTTTTAAACTCGGCTCTGGGGAAACACCTACGATTTGATCAACGAAACGAAAGTGTTTACTTCTAGTAATGGCCCCCAAAGCCAAgaacatttatttcattattactaCTACACCTGCCTCATATggttggatacaatctgggaaGATATGTTATGTAAAAGAGGATCTATATTCACAACCAAAAAAGCTGAAGAAAGACACCATACCTGTAAGGTTGTTGGGCTCTACATTTGACCTTGACCTGCCACTGAATTGTCTGCATATACTGACCCAAGAAATGGCAGAGTTATTGCTGGCTATTGACTCAAATAAAGACAGACTGGATGCATGTAGATTGTCAGAGTCTTTAGACCAGGCTTTAACTTTGGTTAAAGGGTCTGAAGTGACAGTGGAACAAAATGGAAAGTGGCTGAAAGGTGTGATTAAATACACCGGCAGGCTGAATGAACCAATAAAGGATCCTATAGCAGGAGTGTTCTTTGGAGTTGAACTACAGGGAGATGACAAAGGGAAAGGCCAGAATAATGGAACTCACCATTTTAAAAGACTTTTCACTTGTGGGGAGAACTGTGGCATTTTTGCCCCATTCAACAGAATAAGACCAGTGCATTCAGCACCAGCAGACACTTCCCACCCCGCGCCTTGGTCTAGCCAAGCTGAGACAGCTGAGGAGGAGCTGTCTGTTGGAGATCGTGTGTCTTATTTTATTGGTTCTGAAATGCACTCCGGCATGGTTCTGGAAATTCTGAAGAGCAAAGGCATGGTTCTGATCTCAACTGACCGGGATGAGCATGGaaaagagggaggagagagaaaaatctCATTGGATTGTGTTTATAAACTGGAAGGAgatgaATCTGAAAAAATGGACACCTCAAAAAATCCAGAAATAAATCTGAACTCCGTGGTGGAGGTCGATCTGGCAAAAGGACCTACTTATGGGACTGTCCGGTGGATTGGCCATCTGCCTGAAAAGACTGATCTCATGGCTGGGCTGGAACTGGAAGAGGATTGGGGGGTGAATGATGGTACATTCAGAAATGACCgctattttttttgtccacCAAAACGTGGCATTTTTGTAAAGGTCGCCTCGTGTCGCCCTGATTCTCGCTTTCTGGGAGACAATGCATCAGATGGACATTTTGATGTTTCAGCTGTACAGGATTTACAGGACAATGTTCCGGTCCCACCCCTTAGATCACAGGATGTAAAAGATTTTTTGATTGGAAAGCAGAGGGGCATCCAAGGTCACTGTAACTCTTGCTACATGGACTCTGCTCTTTTCAGTCTGTTTACCTGTTCGTCAGTACTGGACTCTCTGCTGTATAAAGGCACTAATCAGAATGATAAACACATTCAAGAAACCCTACGGAAGGAGATTGTGGGTCCTCTACGCAGaacaGGGTTTGTGGCTGATCGCAGTGTAATGAAGCTACGCCAACAGTTGCAGGAACGTGGTCACTCTCCTAGCTACACCACAGATGAGAAAGATCCAGAAGAGTTCCTTACTCTCATTATGCAAGACATTCTGTCTTTGGAGCCGCCACTCAAACTAAAACCTCTGGGAATGAAGAAGGTGGAAACTAGTTTCTTTTACCAGATCTTTGTGGATTACAACAACACACTGGTTTTACCAACAGTCCAGCAGCTGCTGGAGCATTCCTTCTACACCAGCTGCCTCAGACTGGAAGAGGTGCCCTCATGTCTGATCCTGACCATGCCTCGCTCTGGAAAGCAGTTCAAAATGTTCCCCAAAATCATTCCCTCGCTAGAGCTGGACATCACTGCTCTTTTGTACAATGgTCCTCAGCAGTGTGTGCTCTGTGGACAGCTGGCTCATGTGGAGTGCACAGAGTGCTTTGGAGATCCAGTATTTGGCAATACAGGATTCAAACATTTGTGTGACACGTGTTCAGCTCAGGTTCATTTGCACCCCAGCCGGCGGCCCCATAAGCCCACTACCATGACCCTTCCAGAAGGCTTCATCCGCATGTGGGGGTCTGGTGGTCCACCTCACTCTCCTCCACGAGAAAAACTGGAGCTGTTCGCTGTGCTGTGTATAGAGACCAGCCACTACGTTTCCTTTGTCAAACACGGACCAAAAGCAACTGACTGGATCTTCTTTGATAGCATGGCTGATCGAATTGGTGAGATAAATGGTTATAACGTCCCGCAAGTTAAAGAGTGCCCAGAAGTGGGACGCTACCTCACCATGCCTCTTGCTGAGCTGGCAGCACAGGTGCCTCGAGAGATGGAAGGTGTGGCAAAGCGACTTTTCTGCGATGGCTACATGTATCTATACCAGAGTCCCAACATGGGCCTCTATCACTGACACCTCAGCTCTTTAAACAAGCAGCTCTCTAAACGAATACACTCACTCTTATACACAAATTCAGCTCTGATGCCCCCAGAAGAGCATAAATGTACTCTCACTACCGTCTTCATTTTCACGCTTTTAGCTGATTAACTGAGTATGCGCACTCAAGTGCCATAAATCATTGCCTTTCTGGTTTGTGCATCAGGGTACAGGTGGAACACTTGATGTATACTTGATGAGCTTCTGAATTGCTTTGAATTGAGTGAGGAAGAtgctaatgttaaaaatgtacagtGCCTTAAAATCTTACTAAAGTAGGACAGTTAAATACAAAactttgtgcactttttaagacttatttttgcctttttgaaCAATAATCAGATTCAGTTGATTTGCAGATAGAGAAACACTGTGCAAGGGAAAGTGCAaagattatttaagaaaaagttCCTTTTTATTTCTACCAAAACTGTTTATTCCATAGATGCATGTCTTAAAACTTGACAGTAATGAGGCACTTATGATAATTGGCTTCAGAGAAAGTAGATAAAATAAGCCAAATTAATGAGACTGGAATACAAATTACAGATCCTTCTTTGTGTTGGATTTTGTTTAGGATGGACTTGTGGAATTAATATAGTTGTATCTTTATACTATATTAAGTTATAGGTAGaaatgtggatttttttatgttgtgggTATTTTGGTAATGGAAAATGCTTATGCTGCGTAGCCTTACTTATTTTGATTTAATACCTTTGGGGATGCTGTACAATCTGGTGACACCTCAGGGAACTTGCTGTAACATTTTCAGTGCAAATgctttaatgaaaaaataataacaaataaaacagttccTGGAGTGAACTATTACTACTT
>XM_022675857.1
TACAGTGTTGTTAAATGACAGACAGCAAGTTCAGCTACATCACAAAGAGGCGTGTAGTTAATTTAGAATATATGTTAATCTGTCTAATGACAATCGATGTTCCTGGAGTTTACACTCTCGTATAGCTAGTTAAACTAGCGGTACTGACGGGTTTTAAAGGTTTGTAATGCGGTTCAGTCACACTACGACAGTTTTAAACTCGGCTCTGGGGAAACACCTACGATTTGATCAACGAAACGAAAGTAGCTAGTATTAGCGTGTAGCTGGATAGGTGTTTACTTCTAGTAATGGCCCCCAAAGCCAAgaacatttatttcattattactaCTACACCTGCCTCATATggttggatacaatctgggaaGATATGTTATGTAAAAGAGGATCTATATTCACAACCAAAAAAGCTGAAGAAAGACACCATACCTGTAAGGTTGTTGGGCTCTACATTTGACCTTGACCTGCCACTGAATTGTCTGCATATACTGACCCAAGAAATGGCAGAGTTATTGCTGGCTATTGACTCAAATAAAGACAGACTGGATGCATGTAGATTGTCAGAGTCTTTAGACCAGGCTTTAACTTTGGTTAAAGGGTCTGAAGTGACAGTGGAACAAAATGGAAAGTGGCTGAAAGGTGTGATTAAATACACCGGCAGGCTGAATGAACCAATAAAGGATCCTATAGCAGGAGTGTTCTTTGGAGTTGAACTACAGGGAGATGACAAAGGGAAAGGCCAGAATAATGGAACTCACCATTTTAAAAGACTTTTCACTTGTGGGGAGAACTGTGGCATTTTTGCCCCATTCAACAGAATAAGACCAGTGCATTCAGCACCAGCAGACACTTCCCACCCCGCGCCTTGGTCTAGCCAAGCTGAGACAGCTGAGGAGGAGCTGTCTGTTGGAGATCGTGTGTCTTATTTTATTGGTTCTGAAATGCACTCCGGCATGGTTCTGGAAATTCTGAAGAGCAAAGGCATGGTTCTGATCTCAACTGACCGGGATGAGCATGGaaaagagggaggagagagaaaaatctCATTGGATTGTGTTTATAAACTGGAAGGAgatgaATCTGAAAAAATGGACACCTCAAAAAATCCAGAAATAAATCTGAACTCCGTGGTGGAGGTCGATCTGGCAAAAGGACCTACTTATGGGACTGTCCGGTGGATTGGCCATCTGCCTGAAAAGACTGATCTCATGGCTGGGCTGGAACTGGAAGAGGATTGGGGGGTGAATGATGGTACATTCAGAAATGACCgctattttttttgtccacCAAAACGTGGCATTTTTGTAAAGGTCGCCTCGTGTCGCCCTGATTCTCGCTTTCTGGGAGACAATGCATCAGATGGACATTTTGATGTTTCAGCTGTACAGGATTTACAGGACAATGTTCCGGTCCCACCCCTTAGATCACAGGATGTAAAAGATTTTTTGATTGGAAAGCAGAGGGGCATCCAAGGTCACTGTAACTCTTGCTACATGGACTCTGCTCTTTTCAGTCTGTTTACCTGTTCGTCAGTACTGGACTCTCTGCTGTATAAAGGCACTAATCAGAATGATAAACACATTCAAGAAACCCTACGGAAGGAGATTGTGGGTCCTCTACGCAGaacaGGGTTTGTGGCTGATCGCAGTGTAATGAAGCTACGCCAACAGTTGCAGGAACGTGGTCACTCTCCTAGCTACACCACAGATGAGAAAGATCCAGAAGAGTTCCTTACTCTCATTATGCAAGACATTCTGTCTTTGGAGCCGCCACTCAAACTAAAACCTCTGGGAATGAAGAAGGTGGAAACTAGTTTCTTTTACCAGATCTTTGTGGATTACAACAACACACTGGTTTTACCAACAGTCCAGCAGCTGCTGGAGCATTCCTTCTACACCAGCTGCCTCAGACTGGAAGAGGTGCCCTCATGTCTGATCCTGACCATGCCTCGCTCTGGAAAGCAGTTCAAAATGTTCCCCAAAATCATTCCCTCGCTAGAGCTGGACATCACTGCTCTTTTGTACAATGgTCCTCAGCAGTGTGTGCTCTGTGGACAGCTGGCTCATGTGGAGTGCACAGAGTGCTTTGGAGATCCAGTATTTGGCAATACAGGATTCAAACATTTGTGTGACACGTGTTCAGCTCAGGTTCATTTGCACCCCAGCCGGCGGCCCCATAAGCCCACTACCATGACCCTTCCAGAAGGCTTCATCCGCATGTGGGGGTCTGGTGGTCCACCTCACTCTCCTCCACGAGAAAAACTGGAGCTGTTCGCTGTGCTGTGTATAGAGACCAGCCACTACGTTTCCTTTGTCAAACACGGACCAAAAGCAACTGACTGGATCTTCTTTGATAGCATGGCTGATCGAATTGGTGAGATAAATGGTTATAACGTCCCGCAAGTTAAAGAGTGCCCAGAAGTGGGACGCTACCTCACCATGCCTCTTGCTGAGCTGGCAGCACAGGTGCCTCGAGAGATGGAAGGTGTGGCAAAGCGACTTTTCTGCGATGGCTACATGTATCTATACCAGAGTCCCAACATGGGCCTCTATCACTGACACCTCAGCTCTTTAAACAAGCAGCTCTCTAAACGAATACACTCACTCTTATACACAAATTCAGCTCTGATGCCCCCAGAAGAGCATAAATGTACTCTCACTACCGTCTTCATTTTCACGCTTTTAGCTGATTAACTGAGTATGCGCACTCAAGTGCCATAAATCATTGCCTTTCTGGTTTGTGCATCAGGGTACAGGTGGAACACTTGATGTATACTTGATGAGCTTCTGAATTGCTTTGAATTGAGTGAGGAAGAtgctaatgttaaaaatgtacagtGCCTTAAAATCTTACTAAAGTAGGACAGTTAAATACAAAactttgtgcactttttaagacttatttttgcctttttgaaCAATAATCAGATTCAGTTGATTTGCAGATAGAGAAACACTGTGCAAGGGAAAGTGCAaagattatttaagaaaaagttCCTTTTTATTTCTACCAAAACTGTTTATTCCATAGATGCATGTCTTAAAACTTGACAGTAATGAGGCACTTATGATAATTGGCTTCAGAGAAAGTAGATAAAATAAGCCAAATTAATGAGACTGGAATACAAATTACAGATCCTTCTTTGTGTTGGATTTTGTTTAGGATGGACTTGTGGAATTAATATAGTTGTATCTTTATACTATATTAAGTTATAGGTAGaaatgtggatttttttatgttgtgggTATTTTGGTAATGGAAAATGCTTATGCTGCGTAGCCTTACTTATTTTGATTTAATACCTTTGGGGATGCTGTACAATCTGGTGACACCTCAGGGAACTTGCTGTAACATTTTCAGTGCAAATgctttaatgaaaaaataataacaaataaaacagttccTGGAGTGAACTATTACTACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675856.1 False 3393 mRNA 0.43 15 42361736 42381697
XM_022675857.1 True 3422 mRNA 0.43 16 42361736 42381697

Neighbor

gene id symbol gene type direction distance location
LOC103030126 LOC103030126,LOC108440237,LOC108271568,LOC107692395 coding downstream 26612 42276265 ~ 42335124 (-)
akr1a1 akr1a1,akr1a1b,LOC107731642 coding downstream 209788 42139364 ~ 42151948 (-)
nasp nasp,LOC107551040,LOC107594614 coding downstream 223851 42131577 ~ 42137885 (-)
tmem69 tmem69,LOC107579605 coding downstream 275909 42083217 ~ 42085827 (-)
mast2 mast2 coding downstream 279864 41880968 ~ 42081872 (-)
LOC107197605 NA coding upstream 270836 42652533 ~ 42656081 (-)
kank4 kank4,LOC107731645,LOC107704518,LOC107692389,LOC107556542,LOC107591186 coding upstream 276261 42657958 ~ 42728407 (-)
dock7 dock7 coding upstream 363923 42745620 ~ 42826931 (-)
jak1 jak1,LOC107556544,LOC107659055,LOC107739023,LOC107709186 coding upstream 1186032 43567729 ~ 43619228 (-)
G117660 NA non-coding downstream 10541 42350120 ~ 42351195 (-)
G117623 NA non-coding downstream 144720 42216458 ~ 42217016 (-)
G117578 NA non-coding downstream 248677 42097731 ~ 42113059 (-)
G117569 NA non-coding downstream 297728 42063212 ~ 42064008 (-)
G117567 NA non-coding downstream 342206 42016758 ~ 42019530 (-)
G117811 NA non-coding upstream 844857 43226554 ~ 43232574 (-)
G117954 NA non-coding upstream 1056425 43438122 ~ 43438335 (-)
LOC111193793 NA non-coding upstream 1061155 43442852 ~ 43449854 (-)
G117963 NA non-coding upstream 1205805 43587502 ~ 43850446 (-)
G118011 NA non-coding upstream 1392180 43773877 ~ 43775458 (-)
LOC103041916 LOC107758363,LOC107684070,LOC107692412 other downstream 1343922 40816133 ~ 41017814 (-)
LOC103034527 NA other downstream 1592054 40731296 ~ 40769682 (-)
LOC103040080 LOC108440156 other downstream 1997776 40360319 ~ 40363960 (-)
LOC103028549 NA other downstream 3070708 39284217 ~ 39291028 (-)
LOC103032356 LOC108441420,LOC108272184,LOC107582737,LOC107726519 other downstream 3398042 38953162 ~ 38963694 (-)

Expression


Co-expression Network