G60801


Basic Information

Item Value
gene id G60801
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 727837 ~ 736009 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU69226
AAACTTTTGTCCAAAATGTAAAAAAAAAAAAAAAAGAAAGTGTTTAAGGTAAATATGTAAATAAATATATGGTAAATATAGTATATAAAAGTGGCCCATACATCTGGAGAGATTAAAAAAAAAAAAAAAGCTATACCAATGTTTGATTCATGAATGAATCTTTTTTTTCATTGAATCAGTAGAGAATTTGTTTATGGATTAGACAGGTCAAGGACTTCATTGATTCAGAATAATTTGAATATAGCAGACACATTTGTGGATCACAATTTAAAATTGTTATGAAACTTTTCTTTCATTTTGGAGTTTGACAGCCTCAGTCAGTCCCCATTCACTTTCATTTTATTAAAGAAGTGTCTCTTTAAACGACAAAAAGCCAATCTAAATCTACTCTGTCAGCTGCGCCTTGTTCAAATAAAAAAATATAGTAATTCTTTTCTTTGCATTGCCCTTTTCTTATCTAATGCACAGAAGAGTTGGATCAGTGCAAAAGCTTGTTATTCTCCAACTCATGGCGTCTAGTCCCACAACACTCCCACAATTTGCTCTTATCGATAAATAATTTACCTGGTAAGACAGTTTTTATCCGAATGGGATGTGGACATGAGTTCAGAACCCCTCTTACATCTCCCAAGGTCAATCCCAGGACAGGCGTACCCCCAATCTCTAGGATGATGTCACCAACAGTGGCTCCACCCCCAGGTGCTGCTGTAACAAATGGGAACTCTCCATAATCTGCACCACCTCCAATGGCCACACCAAGCTCTCCCGAGGCTCCGCCCAGTGGGACGAAGCTCTCCTGCACTTTCGAGCGCCAGTGCAGCTTCTTAACAGTGGCCTTAGACATGTTGACAGCGCTTCATAATTCCAGCCTTTCCCCCGCGACGTATTGCCTTATGGCTGTAATCCTCACAAATACTCTATCAATATTGATTGCCTATTGGAGTCGCAGGTGACTGCAGATATGCTGTGTTGGAGGAGCACTACGGTTTCAGGTCCATAGCTCTGCGCTGCTGAGGATGAACTGGCCGGAGAGGGAGGACAGTGTAGCATTACAGTCCCGCGCGGAAGCCTCGTGCCCTCAGGGCCGCTCAGCTAATGGAACATGGGTCAAAATTACGTTGCATTCAGTACAGCCCTGTCTTTGCAGGTTTGGCAATAAGGAAGCGATGATAAGGCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69226 True 1179 lncRNA 0.42 2 727837 736009

Neighbor

gene id symbol gene type direction distance location
CI01000010_00588108_00595271 PDZD4 coding upstream 132375 587629 ~ 595462 (+)
CI01000010_00529313_00531098 NA coding upstream 196609 529313 ~ 531228 (+)
CI01000010_00504866_00514962 NA coding upstream 211863 504866 ~ 515974 (+)
CI01000010_00491341_00497973 NA coding upstream 229638 491297 ~ 498199 (+)
CI01000010_00473858_00478160 NA coding upstream 249415 473459 ~ 478422 (+)
CI01000010_00746445_00783522 CACNA1FB, CACNA1F coding downstream 10436 746445 ~ 783522 (+)
CI01000010_00797362_00800297 SYP, SYPA coding downstream 61353 797362 ~ 800301 (+)
CI01000010_00808732_00810151 NA coding downstream 72723 808732 ~ 810331 (+)
CI01000010_00826648_00831638 NA coding downstream 90639 826648 ~ 832705 (+)
CI01000010_00841791_00854049 UCKL1A, UCKL1B, UCKL1 coding downstream 105782 841791 ~ 854239 (+)
G60780 NA non-coding upstream 49730 673066 ~ 678107 (+)
G60693 NA non-coding upstream 130742 596824 ~ 597095 (+)
G60745 NA non-coding upstream 159905 567603 ~ 567932 (+)
G60667 NA non-coding upstream 176501 541818 ~ 551336 (+)
G60707 NA non-coding upstream 421445 306189 ~ 306392 (+)
G60817 NA non-coding downstream 52879 788888 ~ 789426 (+)
G60852 NA non-coding downstream 212848 948857 ~ 959047 (+)
G60915 NA non-coding downstream 283008 1019017 ~ 1019485 (+)
G61218 NA non-coding downstream 514236 1250245 ~ 1250446 (+)
G61220 NA non-coding downstream 516327 1252336 ~ 1252899 (+)
CI01000010_00881905_00883563 NA other downstream 129805 881195 ~ 883684 (+)
CI01000010_00946586_00947327 NA other downstream 209173 945182 ~ 947577 (+)
CI01000010_03197380_03199958 NA other downstream 2458146 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2577686 3313695 ~ 3347796 (+)

Expression


Co-expression Network