G61762


Basic Information

Item Value
gene id G61762
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 2985383 ~ 2985602 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU70339
GATGCCAGATATGGGAATATAACTAAACATACTTATTTTACATAAACGTGCTGTGAAAATAAAATTAATTTCTACTTCTTTTGTTATCTTTTAAAAAAAAAAAACTACTATATTTACTAATTTGCAAGTATGCATGGCAAAAGTGTGCCTGTACTGAATGTGAGCATATGGTATAGACCTTGGGAGGGGTGATATCACTCACCCGAGAGTGACCTTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70339 True 220 lncRNA 0.33 1 2985383 2985602

Neighbor

gene id symbol gene type direction distance location
CI01000010_02847074_02911612 NA coding upstream 73771 2847074 ~ 2911612 (+)
CI01000010_02821021_02827050 NA coding upstream 158166 2821021 ~ 2827217 (+)
CI01000010_02805903_02806462 NA coding upstream 178540 2805662 ~ 2806843 (+)
CI01000010_02734548_02755209 RFX2 coding upstream 229592 2734548 ~ 2755791 (+)
CI01000010_02726989_02731906 NA coding upstream 253022 2726552 ~ 2732361 (+)
CI01000010_03017924_03021246 FAM78BA, FAM78BB, FAM78B coding downstream 31614 3017216 ~ 3022870 (+)
CI01000010_03116123_03125761 EDEM3 coding downstream 130521 3116123 ~ 3126609 (+)
CI01000010_03142808_03164874 CLG10H1ORF21 coding downstream 155042 3140644 ~ 3165257 (+)
CI01000010_03172010_03192359 COLGALT2 coding downstream 186408 3172010 ~ 3192795 (+)
CI01000010_03197380_03199958 NA coding downstream 211778 3197380 ~ 3200044 (+)
G61761 NA non-coding upstream 14 2985126 ~ 2985369 (+)
G61760 NA non-coding upstream 296 2984790 ~ 2985087 (+)
G61676 NA non-coding upstream 180636 2803431 ~ 2804747 (+)
G61663 NA non-coding upstream 202904 2780080 ~ 2782479 (+)
G61662 NA non-coding upstream 205473 2779342 ~ 2779910 (+)
G61763 NA non-coding downstream 160 2985762 ~ 2986144 (+)
G61769 NA non-coding downstream 9300 2994902 ~ 2995140 (+)
G61774 NA non-coding downstream 15667 3001269 ~ 3001484 (+)
G61779 NA non-coding downstream 21487 3007089 ~ 3007312 (+)
CI01000010_00946586_00947327 NA other upstream 2037839 945182 ~ 947577 (+)
CI01000010_00881905_00883563 NA other upstream 2101869 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 2146951 826648 ~ 832705 (+)
CI01000010_03320340_03346243 NA other downstream 328093 3313695 ~ 3347796 (+)
G62838 NA other downstream 904493 3890095 ~ 3893793 (+)
G62856 NA other downstream 952155 3937757 ~ 3939945 (+)
G62983 NA other downstream 1462570 4448172 ~ 4449327 (+)

Expression


Co-expression Network