azin1b (azin1b,LOC108425019,LOC108256938)


Basic Information

Item Value
gene id azin1b
gene name azin1b,LOC108425019,LOC108256938
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 22141456 ~ 22148362 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>NM_001292029.1
CGGCTGAGCTGCCATTTCTTCTCTACTCGGATCAGGCAGTGGAAGCCCGCCAGCGCGTTCTCCAGCTCCCCTCACCCAGGCATATGGCAACAACAGCCTCCCCTCTTTCTTTCACCAGTGTCCCCACCACTCTTTAAAAATTCCGCCGAAAAAGAGAAGACGATTTTCCAAATCTTTCAGGCCGTTATCTCACGGCTCCCCTCTTTCTGTCCAAGTGTATAAGAGGTACCCAGAAGGCCTAGGGGAGGCGCTCTACCGGGAGCAGTTCGACTTCAACGCCGAGCCGCCTTGGGATCCTAGTTGATAGCGGGAGAGCTCCATCTCCCAGCTTGTCCATTTTGTTGCATATTAACAGGACCCCAAAGGCTCAGTAAACTCTCTTTATGATTGTCGGATCTGCGGACTACGGTTGAGATGAAAGGATTTACAGATGAACCAAACTACATTGTTGAGCTGCTGGAAGGAGGAACAACCCTTAAAGATGTCATTGACAACCACATTTATGAACAAGCTCTGGCTGAAAAGAATGCATTTGTTGTGGCCAACCTTGGGGCCTTGATGCAGCAGCATGTTCTTTGGCAGAGCATGCTGCCCATGGTCCGGCCCTTTTACCCAGTCAAATATAACAGCAGTCCTGCTGTCATTGAGGTTCTGGCTGCTCTAGGAGTTGGTTTTGTTTGCTCAAACAAGGCTGAAATCTCCCTGGTACTTAACCATGACGTCCCTCCGGAGAACATCATTCTGTCTGGTGTTTGCAAGCAGCTCTCGCACATCAAACATGCTACCAAGAATGGCATCAACTACTTGGTGTGCGACAACGAAGCAGAGCTTTGCAAAATTGCCAGAGCTCACCCAAATGCCAAGTTGCTCCTGCAGTTGTCCACTGAAGCTCAGACAGAAGAGGCCAGCATGGCATTTGGGTGCTCCCTGAAGAGCTGCAGGCACCTTTTGGAAACCTCTAAGGAGCTGGGTGTGGATGTGGTTGGAGTGATGTTCCAGGTACCAGCATCTTGTAGAGACCCCCAAGTTTATACCCACGCACTGTCTGATGCCCGCTGTGTATTTGATATGGGGGCGGAGATTGGGTTTAACATGGAAATTCTGGATATTGGTGGTGGATTCAGTGGCTCAGAGTTTCAGTTGAAACAGATTCATGCTGCTATTAGGCCTTTGCTGGAGGCCTATTTCCCTGTTATGTCTGGAGTGCGCGTCATTGCTGAGCCAGGAACTTTTTATGTGTCTTCCTCTTTCACCTTGGTTGTAAATGTCATTGGAAAGAAAGTGGCAGCAGGCAGTCTTCATGTTGAGACTAAAGATTTGACTCCAAGCGATGAGCCAGAATTTTTGTACTATTTAAATGATGGTGTCTATGGATCTTTTATGGGAAAGCTGTTGGGAAACACCATTCCATCCCCCAAGGTACACAAGatGTCACTTGCAGCAGATGAGCCGATGTTCCCCAGCAGCTTGTGGGGTCCCTCTTGTGACGCATTGGACCAGGTGGTGGAGCACTGCCTTCTCCCTGAGCTCACTGTGGGAGACTGGCTGATCTTCAACAATATGGGGGCCAGTGGTCAAGAGGAGTCCGCAGCCATCAATAACTCAGACAAGCCACCTGTGTATTACACTATTTCTACAGACGACTGGTTTGAGATGCAGGAGGCTGGAATCTCTCTTGACAACACAATGAGGAATTTTTCCTTGGTCCAGTATGGCTTGTAATTGGATAAAATCTGAAGCTGACCCCCTAACTTGGGCATTTCAAGTCAAGTGGTCAGAATTTAAATGGCCTGCATAGTGAACATTCCAGCAGCTATGGGTGGGGACAACAATGTGTAGCCACTAGTAAAGGAACAAGACCAGTGGCATTGGGATCACACAATAAATTATCCTTATCtaattttttcacaatttaCTGATTGAAATGCTCGTTTTCCTTGCCCACCATAGGAATGAGTCCAGGAGCCCCATGTTTATTAACAACATATGCAACAAAATGGACGACTGTGGAGATGGAATCCAGTCATTGGGTTTCTTAATCAAGAATCGTTTACATAAGTgttcaattaatttaattctaTATTGATTACCTGCTGACAGTCTTGTAAATGAGTTGTCTATTGCTCCATTATGCACTTGTCTATATTAAAATCTGATGTGATTTTAATGAGTTTAGATTCTAGTATCAGACGTGTTGCAACCCTTTGTGTAGATTGACAGAGTGGAAATTTTGATATTGATTTGTTATATCAAAGCTTCTCCATCCTAGTCGACCCTGGGTTTTTAGAACTGTGGAGTGCACCTTTGGTTGTGTCTTCAGTACATGGATTGTGACAGTATTTCCCTGTATTAATATGTACTGTCCCTTGGCTTTATGTACTGTGTTTGACTTTGTGGCCTAAAAAGGCTTATAGAATGAGAACTATAGGGTCACACCAGTATACTGTACAAGTACCAAGGACATATGCCTGATATTAAAGAAACCTTTTAGAACTGGGACTTGGGGAAAGTGGCTTTATATAGCATTTGGGTAGGGAAAGAAGGTGACTTCAAGCGAAATGTGCAAGTGCCTGAGGCAGTGTGCTCAAACTACCAGTAACAGTCACCATAAGCGCTGCAAGATTCATGCTATTAATCTCTGACAGCTCCTCTCAGGCTTCTCACAATAAATAGCTGTTTTAAAGATTTGATCATATTTTTCATTGTAAGTAAAACCAACTTACCTAAATGGCTTTTGTCTCCATAACTAAAATGTAATGATTATGGAGTGAAAAACATCTAACACAATATAGTctgatatgtatataatatgagCCCAGGCTATGCTTGTATCATTTTCCCTGAAGAAACAATACTTTGGGACCAGCAGaggagttaaaaaaaaggtgCCAGATGAGGTGTATTTTGTAATGTAGTACAACAATGAAACATTTGATCATATCTTCTTGTGCTGTTTACCTTCCAAAAGGCTTTGTTAAATGtcttttgatttaaaaatttaTAACACCCCTCCATTTAATGAAATCACACCCTTTAGcgatgtaatgtaaaatatttttgtctgaGGCACTAATGGACCATAGCCTGTTTTTGACTGTAATATTGTGTtgtaatgaaaaatattaaCTTAATACACTTCTTTGACTCAT

Function

symbol description
azin1b Predicted to enable ornithine decarboxylase activator activity and ornithine decarboxylase activity. Predicted to be involved in negative regulation of protein catabolic process; positive regulation of polyamine transmembrane transport; and putrescine biosynthetic process from ornithine. Predicted to act upstream of or within polyamine biosynthetic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in esophagus squamous cell carcinoma; hepatocellular carcinoma; and liver cirrhosis. Orthologous to human AZIN1 (antizyme inhibitor 1).

NR:

description
antizyme inhibitor 1-like

GO:

id name namespace
GO:0006596 polyamine biosynthetic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001292029.1 True 3149 mRNA 0.43 12 22141456 22148362

Neighbor

gene id symbol gene type direction distance location
LOC103030765 klhl38a,LOC103030765,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC108272409,LOC105907674 coding upstream 98909 22035185 ~ 22042547 (+)
LOC103033932 LOC108424940 coding upstream 197202 21931796 ~ 21944254 (+)
fam92a fam92a1,LOC107710198,LOC107653841,LOC107556364,LOC107702073 coding upstream 269004 21860578 ~ 21872452 (+)
lrrc69 NA coding upstream 735267 21401489 ~ 21406189 (+)
otud6b otud6b,LOC107556329 coding upstream 745928 21390138 ~ 21395528 (+)
LOC103028967 rrm2b,LOC108425040,LOC107702093,LOC107556385,LOC107724293,LOC107565196,LOC108256937 coding downstream 2007 22150369 ~ 22159424 (+)
mtdh NA coding downstream 12447 22160809 ~ 22169858 (+)
LOC103028646 laptm4b,LOC103028646,LOC107724295,LOC107702097,LOC107565197 coding downstream 28518 22176880 ~ 22191152 (+)
LOC103028033 NA coding downstream 53190 22201552 ~ 22209038 (+)
LOC103026526 nt5c1aa,5nt1a,LOC108425118,LOC107653825,LOC107702103,LOC107710055,LOC107724290 coding downstream 78760 22227122 ~ 22252040 (+)
G199006 NA non-coding upstream 149829 21991532 ~ 21991627 (+)
G198968 NA non-coding upstream 299628 21820975 ~ 21841828 (+)
G198965 NA non-coding upstream 335717 21805474 ~ 21805739 (+)
G198947 NA non-coding upstream 484692 21656416 ~ 21656764 (+)
G198943 NA non-coding upstream 521611 21619638 ~ 21619845 (+)
G199056 rpl30,LOC105895124,LOC106589133,LOC106572903,LOC107568279,LOC107702100 non-coding downstream 48304 22196666 ~ 22200711 (+)
G199090 NA non-coding downstream 67517 22215879 ~ 22218387 (+)
G199097 NA non-coding downstream 112752 22261114 ~ 22261775 (+)
G199103 NA non-coding downstream 151532 22299894 ~ 22300471 (+)
G199137 LOC103026708,LOC108424525,LOC108257191 non-coding downstream 243004 22391366 ~ 22392565 (+)
LOC103037930 NA other upstream 758456 21358464 ~ 21383000 (+)
G198815 NA other upstream 1338566 20802371 ~ 20802890 (+)
mrpl36 mrpl36 other upstream 1866602 20273021 ~ 20274854 (+)
fndc5 fndc5b,LOC108433842,LOC108272379,LOC107691512,LOC107584283,LOC107687074 other upstream 2052469 20053028 ~ 20088987 (+)
G198540 NA other upstream 2894060 19246972 ~ 19247396 (+)
G199091 stk3,LOC105907728,LOC107724280,LOC107702102 other downstream 70903 22219265 ~ 22223036 (+)
znf704 znf704,LOC107702114,LOC107555575,LOC107696217 other downstream 681869 22830231 ~ 22869257 (+)
ndufs5 ndufs5 other downstream 3469566 25617928 ~ 25620135 (+)
c23h18orf21 LOC103027551 other downstream 4437877 26586239 ~ 26613188 (+)
cdk6 cdk6,LOC107667775,LOC107567973,LOC107722162,LOC107558583,LOC106588946 other downstream 4683592 26831954 ~ 26892623 (+)

Expression


Co-expression Network