G61774


Basic Information

Item Value
gene id G61774
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 3001269 ~ 3001484 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU70351
CGTCACTTCTCAGGGGTTTTACGTAAATAGGCTATTCCAAACAAGTCCGTTTTTTTGCATAGCTAACATAGCCTATAACGTGGCTGTGTAAAAAGCACATCTCTGCAACCTGCTCGAATTCGTCATTCCTTATTGGTGAATGACAAGCTTTATGCTCCACAGAACGCTCTTAAAAATGAAGGTTCCAAAAGGGGGGTTTTGCAGCGATTAACCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70351 True 216 lncRNA 0.42 1 3001269 3001484

Neighbor

gene id symbol gene type direction distance location
CI01000010_02847074_02911612 NA coding upstream 89657 2847074 ~ 2911612 (+)
CI01000010_02821021_02827050 NA coding upstream 174052 2821021 ~ 2827217 (+)
CI01000010_02805903_02806462 NA coding upstream 194426 2805662 ~ 2806843 (+)
CI01000010_02734548_02755209 RFX2 coding upstream 245478 2734548 ~ 2755791 (+)
CI01000010_02726989_02731906 NA coding upstream 268908 2726552 ~ 2732361 (+)
CI01000010_03017924_03021246 FAM78BA, FAM78BB, FAM78B coding downstream 15732 3017216 ~ 3022870 (+)
CI01000010_03116123_03125761 EDEM3 coding downstream 114639 3116123 ~ 3126609 (+)
CI01000010_03142808_03164874 CLG10H1ORF21 coding downstream 139160 3140644 ~ 3165257 (+)
CI01000010_03172010_03192359 COLGALT2 coding downstream 170526 3172010 ~ 3192795 (+)
CI01000010_03197380_03199958 NA coding downstream 195896 3197380 ~ 3200044 (+)
G61769 NA non-coding upstream 6129 2994902 ~ 2995140 (+)
G61763 NA non-coding upstream 15125 2985762 ~ 2986144 (+)
G61762 NA non-coding upstream 15667 2985383 ~ 2985602 (+)
G61761 NA non-coding upstream 15900 2985126 ~ 2985369 (+)
G61760 NA non-coding upstream 16182 2984790 ~ 2985087 (+)
G61779 NA non-coding downstream 5605 3007089 ~ 3007312 (+)
G61784 NA non-coding downstream 22481 3023965 ~ 3025452 (+)
G61444 NA non-coding downstream 30273 3031757 ~ 3042482 (+)
G61409 NA non-coding downstream 53690 3055174 ~ 3087016 (+)
CI01000010_00946586_00947327 NA other upstream 2053725 945182 ~ 947577 (+)
CI01000010_00881905_00883563 NA other upstream 2117755 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 2162837 826648 ~ 832705 (+)
CI01000010_03320340_03346243 NA other downstream 312211 3313695 ~ 3347796 (+)
G62838 NA other downstream 888611 3890095 ~ 3893793 (+)
G62856 NA other downstream 936273 3937757 ~ 3939945 (+)
G62983 NA other downstream 1446688 4448172 ~ 4449327 (+)

Expression


Co-expression Network