G61779


Basic Information

Item Value
gene id G61779
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 3007089 ~ 3007312 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU70356
AGGAAGGTCAGTAGGTAGAAAGTTACCCTAGAACTTTACAATATATTCGTTATATAATTTAAACTGGTAACAGCATGCATGTTTGAGTAGGGGTGAGCAAAAAAAGTGATGTGAGTGAGAAACTGGACAGATAGTGATCAACTCTGACTGATAGGAAAGAAATGGTCGGATGAATAAGACCAGAGTCATAAGCCATAACAGCATTCACCCCTGCCCACACTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70356 True 224 lncRNA 0.41 1 3007089 3007312

Neighbor

gene id symbol gene type direction distance location
CI01000010_02847074_02911612 NA coding upstream 95477 2847074 ~ 2911612 (+)
CI01000010_02821021_02827050 NA coding upstream 179872 2821021 ~ 2827217 (+)
CI01000010_02805903_02806462 NA coding upstream 200246 2805662 ~ 2806843 (+)
CI01000010_02734548_02755209 RFX2 coding upstream 251298 2734548 ~ 2755791 (+)
CI01000010_02726989_02731906 NA coding upstream 274728 2726552 ~ 2732361 (+)
CI01000010_03017924_03021246 FAM78BA, FAM78BB, FAM78B coding downstream 9904 3017216 ~ 3022870 (+)
CI01000010_03116123_03125761 EDEM3 coding downstream 108811 3116123 ~ 3126609 (+)
CI01000010_03142808_03164874 CLG10H1ORF21 coding downstream 133332 3140644 ~ 3165257 (+)
CI01000010_03172010_03192359 COLGALT2 coding downstream 164698 3172010 ~ 3192795 (+)
CI01000010_03197380_03199958 NA coding downstream 190068 3197380 ~ 3200044 (+)
G61774 NA non-coding upstream 5605 3001269 ~ 3001484 (+)
G61769 NA non-coding upstream 11949 2994902 ~ 2995140 (+)
G61763 NA non-coding upstream 20945 2985762 ~ 2986144 (+)
G61762 NA non-coding upstream 21487 2985383 ~ 2985602 (+)
G61761 NA non-coding upstream 21720 2985126 ~ 2985369 (+)
G61784 NA non-coding downstream 16653 3023965 ~ 3025452 (+)
G61444 NA non-coding downstream 24445 3031757 ~ 3042482 (+)
G61409 NA non-coding downstream 47862 3055174 ~ 3087016 (+)
G61826 NA non-coding downstream 194327 3201639 ~ 3232879 (+)
CI01000010_00946586_00947327 NA other upstream 2059545 945182 ~ 947577 (+)
CI01000010_00881905_00883563 NA other upstream 2123575 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 2168657 826648 ~ 832705 (+)
CI01000010_03320340_03346243 NA other downstream 306383 3313695 ~ 3347796 (+)
G62838 NA other downstream 882783 3890095 ~ 3893793 (+)
G62856 NA other downstream 930445 3937757 ~ 3939945 (+)
G62983 NA other downstream 1440860 4448172 ~ 4449327 (+)

Expression


Co-expression Network