Gene
RNA
| Item | Value |
|---|---|
| gene id | G62648 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000010 |
| NCBI id | null |
| chromosome length | 12265998 |
| location | 3436698 ~ 3436928 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU71340 | True | 231 | lncRNA | 0.39 | 1 | 3436698 | 3436928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000010_03308058_03308511 | NA | coding | downstream | 126351 | 3307482 ~ 3310347 (-) |
| CI01000010_03204475_03207149 | MPEG1.2 | coding | downstream | 229549 | 3204435 ~ 3207149 (-) |
| CI01000010_03109809_03114298 | NPL | coding | downstream | 322400 | 3109803 ~ 3114298 (-) |
| CI01000010_03101723_03103968 | SEC22BB, SEC22B, SEC22B.S, SEC22B.L, S22BB | coding | downstream | 332540 | 3100588 ~ 3104158 (-) |
| CI01000010_03033615_03059357 | NOTCH2 | coding | downstream | 377341 | 3032384 ~ 3059357 (-) |
| CI01000010_03494576_03500309 | MPND | coding | upstream | 57378 | 3494306 ~ 3500309 (-) |
| CI01000010_03517080_03524389 | FSD1 | coding | upstream | 79932 | 3516860 ~ 3524389 (-) |
| CI01000010_03527436_03530341 | NA | coding | upstream | 90480 | 3527408 ~ 3530359 (-) |
| CI01000010_03544215_03547481 | PRRG1 | coding | upstream | 106592 | 3543520 ~ 3547481 (-) |
| CI01000010_03557384_03566580 | TAB3 | coding | upstream | 120004 | 3556932 ~ 3567714 (-) |
| G62596 | NA | non-coding | downstream | 590 | 3391336 ~ 3436108 (-) |
| G62636 | NA | non-coding | downstream | 33880 | 3402307 ~ 3402818 (-) |
| G62616 | NA | non-coding | downstream | 48460 | 3367235 ~ 3388238 (-) |
| G62540 | NA | non-coding | downstream | 122545 | 3277706 ~ 3314153 (-) |
| G62536 | NA | non-coding | downstream | 160635 | 3275088 ~ 3276063 (-) |
| G62650 | NA | non-coding | upstream | 1418 | 3438346 ~ 3438580 (-) |
| G62682 | NA | non-coding | upstream | 161898 | 3598826 ~ 3599035 (-) |
| G62699 | NA | non-coding | upstream | 194610 | 3631538 ~ 3632004 (-) |
| G64119 | NA | non-coding | upstream | 482742 | 3919670 ~ 3919890 (-) |
| G64126 | NA | non-coding | upstream | 492688 | 3929616 ~ 3931626 (-) |
| G61965 | NA | other | downstream | 1891647 | 1424425 ~ 1545051 (-) |
| G61888 | NA | other | downstream | 2190680 | 1244469 ~ 1246018 (-) |
| G61045 | NA | other | downstream | 2861187 | 572753 ~ 575511 (-) |
| CI01000010_03890095_03899058 | SSBP3B, SSBP3, SSBP2 | other | upstream | 453141 | 3890069 ~ 3899058 (-) |
| G64237 | NA | other | upstream | 793022 | 4229950 ~ 4236416 (-) |
| CI01000010_04612793_04613017 | SMIM15 | other | upstream | 1175568 | 4612460 ~ 4613135 (-) |
| G64564 | NA | other | upstream | 1612227 | 5049155 ~ 5242926 (-) |
