G61860


Basic Information

Item Value
gene id G61860
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 3570918 ~ 3571148 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU70447
GAGACCTCTTTCCCACAAGCCGAGACTCAAGTCCATACCAGACCGAGCCCATATTTATGTGGTCTTGAGGGTTTGTCTCAAGAGCACACAGTCAAGATTGCTACTGTATAAACACACAGTGGAATAACTACATGTCATATTTCTATTTGGGATCTCTGACACAGATCAGGATTTTAGATCATAGCAAAGTTATTTGAGATTGATAAGTCAACATTTTCTCTGAGCTCCTGG

Function

NR:

description
PREDICTED: voltage-dependent R-type calcium channel subunit alpha-1E-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70447 True 231 lncRNA 0.41 1 3570918 3571148

Neighbor

gene id symbol gene type direction distance location
CI01000010_03549798_03555625 TMEM47, TMEM47.L coding upstream 15109 3549798 ~ 3555809 (+)
CI01000010_03532494_03537374 CPOX coding upstream 32908 3532494 ~ 3538010 (+)
CI01000010_03504678_03509756 NA coding upstream 61162 3504678 ~ 3509756 (+)
CI01000010_03483057_03492616 SH3GL1B, SH3GL1 coding upstream 78024 3483057 ~ 3492894 (+)
CI01000010_03455472_03466444 RORCA coding upstream 104147 3455180 ~ 3466771 (+)
CI01000010_03577980_03589314 NEXN coding downstream 6832 3577980 ~ 3589348 (+)
CI01000010_03591507_03597612 NA coding downstream 20359 3591507 ~ 3598197 (+)
CI01000010_03625058_03633146 NA coding downstream 53877 3625025 ~ 3633200 (+)
CI01000010_03637767_03674123 NA coding downstream 66619 3637767 ~ 3674167 (+)
CI01000010_03684496_03695503 DMAP1, DMAP1.L coding downstream 113348 3684496 ~ 3695539 (+)
G61847 NA non-coding upstream 131084 3439611 ~ 3439834 (+)
CI01000010_03320340_03346243 NA non-coding upstream 223122 3313695 ~ 3347796 (+)
G61835 NA non-coding upstream 297913 3272794 ~ 3273005 (+)
G61826 NA non-coding upstream 338039 3201639 ~ 3232879 (+)
G61409 NA non-coding upstream 483902 3055174 ~ 3087016 (+)
G61879 NA non-coding downstream 114288 3685436 ~ 3685759 (+)
G62738 NA non-coding downstream 132841 3703989 ~ 3704201 (+)
G62748 NA non-coding downstream 186052 3757200 ~ 3757801 (+)
CI01000010_03781620_03785840 GM11353, RPS8B, RPS8 non-coding downstream 210485 3781620 ~ 3786254 (+)
G62791 NA non-coding downstream 244883 3816031 ~ 3816505 (+)
CI01000010_03197380_03199958 NA other upstream 371010 3197380 ~ 3200044 (+)
CI01000010_00946586_00947327 NA other upstream 2623374 945182 ~ 947577 (+)
CI01000010_00881905_00883563 NA other upstream 2687404 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 2732486 826648 ~ 832705 (+)
G62838 NA other downstream 318947 3890095 ~ 3893793 (+)
G62856 NA other downstream 366609 3937757 ~ 3939945 (+)
G62983 NA other downstream 877024 4448172 ~ 4449327 (+)
CI01000010_04640858_04683752 OSBPL9 other downstream 1069693 4640516 ~ 4683778 (+)
G63403 NA other downstream 2124297 5695445 ~ 5707085 (+)

Expression


Co-expression Network