G197188


Basic Information

Item Value
gene id G197188
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 12929069 ~ 12929331 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU267659
TGGTGTTGCTATAAAAGTAGCCATTTTAAACCAGTTGTTTCAAATAAATAACCCACAATTAGAGAATGACAAAGAATATTGTTAAcgtttttcactgtttacttATCATTTGCACAACATATGGCAGGACAATTATGCACTGAAATGCTTGTGGTGAGGCTCAGGTAATTAGTCTACAGCAgaggtttaaataaatatatagatctaagcactaaataaaactgaaaatatactgaatatacagAAGGACCTATAAAAATAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267659 True 263 lncRNA 0.30 1 12929069 12929331

Neighbor

gene id symbol gene type direction distance location
LOC103028905 NA coding upstream 24443 12898727 ~ 12904626 (+)
LOC107197759 NA coding upstream 32617 12893219 ~ 12896452 (+)
LOC111195554 NA coding upstream 140291 12784178 ~ 12788778 (+)
LOC103026839 txnip,txnipa,LOC108410889,LOC107672857,LOC107738596,LOC107702541,LOC107731569 coding upstream 220901 12703854 ~ 12708168 (+)
LOC103026238 LOC108410890 coding upstream 313887 12535431 ~ 12615182 (+)
LOC103030274 NA coding downstream 68258 12997589 ~ 12999507 (+)
LOC111195514 NA coding downstream 99577 13028908 ~ 13030890 (+)
LOC111195511 NA coding downstream 111860 13041191 ~ 13043435 (+)
LOC111195512 NA coding downstream 141152 13070483 ~ 13072657 (+)
LOC103041798 NA coding downstream 156415 13085746 ~ 13087926 (+)
G197175 NA non-coding upstream 43058 12885623 ~ 12886011 (+)
G197174 NA non-coding upstream 43584 12885202 ~ 12885485 (+)
G197099 mtx1b,mtx1,LOC103026555,LOC108410892,LOC108272909,LOC105901471 non-coding upstream 235164 12662051 ~ 12693905 (+)
G197097 NA non-coding upstream 288055 12640778 ~ 12641014 (+)
G197090 NA non-coding upstream 304464 12622009 ~ 12624605 (+)
G197189 NA non-coding downstream 78 12929409 ~ 12929695 (+)
G197190 NA non-coding downstream 1275 12930606 ~ 12930943 (+)
G197197 NA non-coding downstream 9026 12938357 ~ 12938641 (+)
G197198 NA non-coding downstream 10983 12940314 ~ 12941082 (+)
G197199 LOC108442976 non-coding downstream 12521 12941852 ~ 12942284 (+)
LOC103029421 NA other upstream 542 12889358 ~ 12928527 (+)
G197106 NA other upstream 154573 12715368 ~ 12774496 (+)
grhl2 grhl2,LOC107748368,LOC107550099,LOC107738316,LOC107698657,LOC107672862,LOC107552317 other upstream 1182834 11687399 ~ 11746235 (+)
polr2k NA other upstream 1374486 11551660 ~ 11554583 (+)
mrpl24 mrpl24,LOC107559719,LOC107669969,LOC107693309,LOC107580210 other upstream 1511366 11402155 ~ 11417703 (+)
s100a14 s100a14,LOC108442988 other downstream 27339 12956670 ~ 12964349 (+)
G197334 LOC108441809 other downstream 395055 13324386 ~ 13362658 (+)
rpa3 NA other downstream 1347460 14276791 ~ 14293068 (+)
tac1 tac1 other downstream 1536934 14466265 ~ 14468882 (+)
G197665 NA other downstream 1865089 14794420 ~ 14796728 (+)

Expression


Co-expression Network